LOCUS EU887607 3543 bp mRNA linear HUM 17-OCT-2008 DEFINITION Homo sapiens nuclear factor of activated T-cells c3 isoform IB-IX (NFATC3) mRNA, complete cds, alternatively spliced. ACCESSION EU887607 VERSION EU887607.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3543) AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T. TITLE Alternative splicing and expression of human and mouse NFAT genes JOURNAL Genomics 92 (5), 279-291 (2008) PUBMED 18675896 REFERENCE 2 (bases 1 to 3543) AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T. TITLE Direct Submission JOURNAL Submitted (10-JUL-2008) Department of Gene Technology, Tallinn University of Technology, Akadeemia Street 15, Tallinn, Harju 12618, Estonia FEATURES Location/Qualifiers source 1..3543 /db_xref="H-InvDB:HIT000558294" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="16" /map="16q22.2" gene 1..3543 /gene="NFATC3" CDS 1..3138 /gene="NFATC3" /note="transcription factor; alternatively spliced" /codon_start=1 /product="nuclear factor of activated T-cells c3 isoform IB-IX" /protein_id="ACG55627.1" /translation="MTTANCGAHDELDFKLVFGEDGAPAPPPPGSRPADLEPDDCASI YIFNVDPPPSTLTTPLCLPHHGLPSHSSVLSPSFQLQSHKNYEGTCEIPESKYSPLGG PKPFECPSIQITSISPNCHQELDAHEDDLQINDPEREFLERPSRDHLYLPLEPSYRES SLSPSPASSISSRSWFSDASSCESLSHIYDDVDSELNEAAARFTLGSPLTSPGGSPGG CPGEETWHQQYGLGHSLSPRQSPCHSPRSSVTDENWLSPRPASGPSSRPTSPCGKRRH SSAEVCYAGSLSPHHSPVPSPGHSPRGSVTEDTWLNASVHGGSGLGPAVFPFQYCVET DIPLKTRKTSEDQAAILPGKLELCSDDQGSLSPARETSIDDGLGSQYPLKKDSCGDQF LSVPSPFTWSKPKPGHTPIFRTSSLPPLDWPLPAHFGQCELKIEVQPKTHHRAHYETE GSRGAVKASTGGHPVVKLLGYNEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVAT ASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRL VFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSN FLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYL CNGKRKKSQSQRFTYTPVLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSV LSGQRSLICSIPQTYASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPV GSSYQPMQTNVVYNGPTCLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHS SNSGSTGHLLAHTPHSVHTLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQPIT YGPSHSGSATTASPAASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSG QHSTQAQSTGQGGLSAPSSLICHSLCDPASFPPDGATVSIKPEPEDREPNFATIGLQD ITLDDGKFISDMFLK" BASE COUNT 941 a 891 c 745 g 966 t ORIGIN 1 atgactactg caaactgtgg cgcccacgac gagctcgact tcaaactcgt ctttggcgag 61 gacggggcgc cggcgccgcc gcccccgggc tcgcggcctg cagatcttga gccagatgat 121 tgtgcatcca tttacatctt taatgtagat ccacctccat ctactttaac cacaccactt 181 tgcttaccac atcatggatt accgtctcac tcttctgttt tgtcaccatc gtttcagctc 241 caaagtcaca aaaactatga aggaacttgt gagattcctg aatctaaata tagcccatta 301 ggtggtccca aaccctttga gtgcccaagt attcaaatta catctatctc tcctaactgt 361 catcaagaat tagatgcaca tgaagatgac ctacagataa atgacccaga acgggaattt 421 ttggaaaggc cttctagaga tcatctctat cttcctcttg agccatccta ccgggagtct 481 tctcttagtc ctagtcctgc cagcagcatc tcttctagga gttggttctc tgatgcatct 541 tcttgtgaat cgctttcaca tatttatgat gatgtggact cagagttgaa tgaagctgca 601 gcccgattta cccttggatc ccctctgact tctcctggtg gctctccagg gggctgccct 661 ggagaagaaa cttggcatca acagtatgga cttggacact cattatcacc caggcaatct 721 ccttgccact ctcctagatc cagtgtcact gatgagaatt ggctgagccc caggccagcc 781 tcaggaccct catcaaggcc cacatccccc tgtgggaaac ggaggcactc cagtgctgaa 841 gtttgttatg ctgggtccct ttcaccccat cactcacctg ttccttcacc tggtcactcc 901 cccaggggaa gtgtgacaga agatacgtgg ctcaatgctt ctgtccatgg tgggtcaggc 961 cttggccctg cagtttttcc atttcagtac tgtgtagaga ctgacatccc tctcaaaaca 1021 aggaaaactt ctgaagatca agctgccata ctaccaggaa aattagagct gtgttcagat 1081 gaccaaggga gtttatcacc agcccgggag acttcaatag atgatggcct tggatctcag 1141 tatcctttaa agaaagattc atgtggtgat cagtttcttt cagttccttc accctttacc 1201 tggagcaaac caaagcctgg ccacacccct atatttcgca catcttcatt acctccacta 1261 gactggcctt taccagctca ttttggacaa tgtgaactga aaatagaagt gcaacctaaa 1321 actcatcatc gagcccatta tgaaactgaa ggtagccgag gggcagtaaa agcatctact 1381 gggggacatc ctgttgtgaa gctcctgggc tataacgaaa agccaataaa tctacaaatg 1441 tttattggga cagcagatga tcgatattta cgacctcatg cattttacca ggtgcatcga 1501 atcactggga agacagtcgc tactgcaagc caagagataa taattgccag tacaaaagtt 1561 ctggaaattc cacttcttcc tgaaaataat atgtcagcca gtattgattg tgcaggtatt 1621 ttgaaactcc gcaattcaga tatagaactt cgaaaaggag aaactgatat tggcagaaag 1681 aatactagag tacgacttgt gtttcgtgta cacatcccac agcccagtgg aaaagtcctt 1741 tctctgcaga tagcctctat acccgttgag tgctcccagc ggtctgctca agaacttcct 1801 catattgaga agtacagtat caacagttgt tctgtaaatg gaggtcatga aatggttgtg 1861 actggatcta attttcttcc agaatccaaa atcatttttc ttgaaaaagg acaagatgga 1921 cgacctcagt gggaggtaga agggaagata atcagggaaa aatgtcaagg ggctcacatt 1981 gtccttgaag ttcctccata tcataaccca gcagttacag ctgcagtgca ggtgcacttt 2041 tatctttgca atggcaagag gaaaaaaagc cagtctcaac gttttactta tacaccagtt 2101 ttgatgaagc aagaacacag agaagagatt gatttgtctt cagttccatc tttgcctgtg 2161 cctcatcctg ctcagaccca gaggccttcc tctgattcag ggtgttcaca tgacagtgta 2221 ctgtcaggac agagaagttt gatttgctcc atcccacaaa catatgcatc catggtgacc 2281 tcatcccatc tgccacagtt gcagtgtaga gatgagagtg ttagtaaaga acagcatatg 2341 attccttctc caattgtaca ccagcctttt caagtcacac caacacctcc tgtggggtct 2401 tcctatcagc ctatgcaaac taatgttgtg tacaatggac caacttgtct tcctattaat 2461 gctgcctcta gtcaagaatt tgattcagtt ttgtttcagc aggatgcaac tctttctggt 2521 ttagtgaatc ttggctgtca accactgtca tccataccat ttcattcttc aaattcaggc 2581 tcaacaggac atctcttagc ccatacacct cattctgtgc ataccctgcc tcatctgcaa 2641 tcaatgggat atcattgttc aaatacagga caaagatctc tttcttctcc agtggctgac 2701 cagattacag gtcagccttc gtctcagtta caacctatta catatggtcc ttcacattca 2761 gggtctgcta caacagcttc cccagcagct tctcatccct tggctagttc accgctttct 2821 gggccaccat ctcctcagct tcagcctatg ccttaccaat ctcctagctc aggaactgcc 2881 tcatcaccgt ctccagccac cagaatgcat tctggacagc actcaactca agcacaaagt 2941 acgggccagg ggggtctttc tgcaccttca tccttaatat gtcacagttt gtgtgatcca 3001 gcgtcatttc cacctgatgg ggcaactgtg agcattaaac ctgaaccaga agatcgagag 3061 cctaactttg caaccattgg tctgcaggac atcactttag atgatggtaa gttcatctct 3121 gatatgttct tgaagtagtg aagattcagg gactttattc tcccaagtgt catgaaaaag 3181 tttctatgga ttgcttattg gcatatggtt gggcttttaa ataagttgtt attagaaata 3241 tatgttaata tataactttg ccaggtacca cggctcacgc ctgtatccca gcactttgga 3301 aggctgaggc gggtggatca caaggtcagg agttcaagac cagcctggcc aacatggtgt 3361 aacgctgtct ctactaaaaa tacaaaaaat tagccaggca tggtggtgtg tgactataat 3421 cccagctact cgggaggctg agacaggaga atcacttgaa cccgggaggt ggcagttgca 3481 gggagctaag atcgcgccat tgcactccag cctgggcggc agagcaagac tccgtctcgg 3541 gaa //