LOCUS EU887606 3228 bp mRNA linear HUM 17-OCT-2008
DEFINITION Homo sapiens nuclear factor of activated T-cells c3 isoform
IB-deltaXa (NFATC3) mRNA, complete cds, alternatively spliced.
ACCESSION EU887606
VERSION EU887606.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3228)
AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T.
TITLE Alternative splicing and expression of human and mouse NFAT genes
JOURNAL Genomics 92 (5), 279-291 (2008)
PUBMED 18675896
REFERENCE 2 (bases 1 to 3228)
AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T.
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2008) Department of Gene Technology, Tallinn
University of Technology, Akadeemia Street 15, Tallinn, Harju
12618, Estonia
FEATURES Location/Qualifiers
source 1..3228
/db_xref="H-InvDB:HIT000558293"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="16"
/map="16q22.2"
gene 1..3228
/gene="NFATC3"
CDS 1..3228
/gene="NFATC3"
/note="transcription factor; alternatively spliced"
/codon_start=1
/product="nuclear factor of activated T-cells c3 isoform
IB-deltaXa"
/protein_id="ACG55626.1"
/translation="MTTANCGAHDELDFKLVFGEDGAPAPPPPGSRPADLEPDDCASI
YIFNVDPPPSTLTTPLCLPHHGLPSHSSVLSPSFQLQSHKNYEGTCEIPESKYSPLGG
PKPFECPSIQITSISPNCHQELDAHEDDLQINDPEREFLERPSRDHLYLPLEPSYRES
SLSPSPASSISSRSWFSDASSCESLSHIYDDVDSELNEAAARFTLGSPLTSPGGSPGG
CPGEETWHQQYGLGHSLSPRQSPCHSPRSSVTDENWLSPRPASGPSSRPTSPCGKRRH
SSAEVCYAGSLSPHHSPVPSPGHSPRGSVTEDTWLNASVHGGSGLGPAVFPFQYCVET
DIPLKTRKTSEDQAAILPGKLELCSDDQGSLSPARETSIDDGLGSQYPLKKDSCGDQF
LSVPSPFTWSKPKPGHTPIFRTSSLPPLDWPLPAHFGQCELKIEVQPKTHHRAHYETE
GSRGAVKASTGGHPVVKLLGYNEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVAT
ASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRL
VFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSN
FLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYL
CNGKRKKSQSQRFTYTPVLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSV
LSGQRSLICSIPQTYASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPV
GSSYQPMQTNVVYNGPTCLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHS
SNSGSTGHLLAHTPHSVHTLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQPIT
YGPSHSGSATTASPAASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSG
QHSTQAQSTGQGGLSAPSSLICHSLCDPASFPPDGATVSIKPEPEDREPNFATIGLQD
ITLDDVNEIIGRDMSQISVSQGAGVSRQAPLPSPESLDLGRSDGL"
BASE COUNT 851 a 831 c 666 g 880 t
ORIGIN
1 atgactactg caaactgtgg cgcccacgac gagctcgact tcaaactcgt ctttggcgag
61 gacggggcgc cggcgccgcc gcccccgggc tcgcggcctg cagatcttga gccagatgat
121 tgtgcatcca tttacatctt taatgtagat ccacctccat ctactttaac cacaccactt
181 tgcttaccac atcatggatt accgtctcac tcttctgttt tgtcaccatc gtttcagctc
241 caaagtcaca aaaactatga aggaacttgt gagattcctg aatctaaata tagcccatta
301 ggtggtccca aaccctttga gtgcccaagt attcaaatta catctatctc tcctaactgt
361 catcaagaat tagatgcaca tgaagatgac ctacagataa atgacccaga acgggaattt
421 ttggaaaggc cttctagaga tcatctctat cttcctcttg agccatccta ccgggagtct
481 tctcttagtc ctagtcctgc cagcagcatc tcttctagga gttggttctc tgatgcatct
541 tcttgtgaat cgctttcaca tatttatgat gatgtggact cagagttgaa tgaagctgca
601 gcccgattta cccttggatc ccctctgact tctcctggtg gctctccagg gggctgccct
661 ggagaagaaa cttggcatca acagtatgga cttggacact cattatcacc caggcaatct
721 ccttgccact ctcctagatc cagtgtcact gatgagaatt ggctgagccc caggccagcc
781 tcaggaccct catcaaggcc cacatccccc tgtgggaaac ggaggcactc cagtgctgaa
841 gtttgttatg ctgggtccct ttcaccccat cactcacctg ttccttcacc tggtcactcc
901 cccaggggaa gtgtgacaga agatacgtgg ctcaatgctt ctgtccatgg tgggtcaggc
961 cttggccctg cagtttttcc atttcagtac tgtgtagaga ctgacatccc tctcaaaaca
1021 aggaaaactt ctgaagatca agctgccata ctaccaggaa aattagagct gtgttcagat
1081 gaccaaggga gtttatcacc agcccgggag acttcaatag atgatggcct tggatctcag
1141 tatcctttaa agaaagattc atgtggtgat cagtttcttt cagttccttc accctttacc
1201 tggagcaaac caaagcctgg ccacacccct atatttcgca catcttcatt acctccacta
1261 gactggcctt taccagctca ttttggacaa tgtgaactga aaatagaagt gcaacctaaa
1321 actcatcatc gagcccatta tgaaactgaa ggtagccgag gggcagtaaa agcatctact
1381 gggggacatc ctgttgtgaa gctcctgggc tataacgaaa agccaataaa tctacaaatg
1441 tttattggga cagcagatga tcgatattta cgacctcatg cattttacca ggtgcatcga
1501 atcactggga agacagtcgc tactgcaagc caagagataa taattgccag tacaaaagtt
1561 ctggaaattc cacttcttcc tgaaaataat atgtcagcca gtattgattg tgcaggtatt
1621 ttgaaactcc gcaattcaga tatagaactt cgaaaaggag aaactgatat tggcagaaag
1681 aatactagag tacgacttgt gtttcgtgta cacatcccac agcccagtgg aaaagtcctt
1741 tctctgcaga tagcctctat acccgttgag tgctcccagc ggtctgctca agaacttcct
1801 catattgaga agtacagtat caacagttgt tctgtaaatg gaggtcatga aatggttgtg
1861 actggatcta attttcttcc agaatccaaa atcatttttc ttgaaaaagg acaagatgga
1921 cgacctcagt gggaggtaga agggaagata atcagggaaa aatgtcaagg ggctcacatt
1981 gtccttgaag ttcctccata tcataaccca gcagttacag ctgcagtgca ggtgcacttt
2041 tatctttgca atggcaagag gaaaaaaagc cagtctcaac gttttactta tacaccagtt
2101 ttgatgaagc aagaacacag agaagagatt gatttgtctt cagttccatc tttgcctgtg
2161 cctcatcctg ctcagaccca gaggccttcc tctgattcag ggtgttcaca tgacagtgta
2221 ctgtcaggac agagaagttt gatttgctcc atcccacaaa catatgcatc catggtgacc
2281 tcatcccatc tgccacagtt gcagtgtaga gatgagagtg ttagtaaaga acagcatatg
2341 attccttctc caattgtaca ccagcctttt caagtcacac caacacctcc tgtggggtct
2401 tcctatcagc ctatgcaaac taatgttgtg tacaatggac caacttgtct tcctattaat
2461 gctgcctcta gtcaagaatt tgattcagtt ttgtttcagc aggatgcaac tctttctggt
2521 ttagtgaatc ttggctgtca accactgtca tccataccat ttcattcttc aaattcaggc
2581 tcaacaggac atctcttagc ccatacacct cattctgtgc ataccctgcc tcatctgcaa
2641 tcaatgggat atcattgttc aaatacagga caaagatctc tttcttctcc agtggctgac
2701 cagattacag gtcagccttc gtctcagtta caacctatta catatggtcc ttcacattca
2761 gggtctgcta caacagcttc cccagcagct tctcatccct tggctagttc accgctttct
2821 gggccaccat ctcctcagct tcagcctatg ccttaccaat ctcctagctc aggaactgcc
2881 tcatcaccgt ctccagccac cagaatgcat tctggacagc actcaactca agcacaaagt
2941 acgggccagg ggggtctttc tgcaccttca tccttaatat gtcacagttt gtgtgatcca
3001 gcgtcatttc cacctgatgg ggcaactgtg agcattaaac ctgaaccaga agatcgagag
3061 cctaactttg caaccattgg tctgcaggac atcactttag atgatgtgaa cgagataatt
3121 gggagagaca tgtcccagat ttctgtttcc caaggagcag gggtgagcag gcaggctccc
3181 ctcccgagtc ctgagtccct ggatttagga agatctgatg ggctctaa
//