LOCUS EU432099 1019 bp mRNA linear HUM 13-MAY-2008 DEFINITION Homo sapiens TMPRSS2-ERG prostate cancer specific isoform 1 (ERG) mRNA, complete cds, alternatively spliced. ACCESSION EU432099 VERSION EU432099.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1019) AUTHORS Hu,Y., Dobi,A., Sreenath,T., Cook,C., Tadase,A.Y., Ravindranath,L., Cullen,J., Furusato,B., Chen,Y., Thangapazham,R.L., Mohamed,A., Sun,C., Sesterhenn,I.A., McLeod,D.G., Petrovics,G. and Srivastava,S. TITLE Delineation of TMPRSS2-ERG splice variants in prostate cancer JOURNAL Clin. Cancer Res. 14 (15), 4719-4725 (2008) PUBMED 18676740 REFERENCE 2 (bases 1 to 1019) AUTHORS Sreenath,T., Dobi,A., Petrovics,G., Tadese,A.Y., Cook,C., Srivastava,S. and McLeod,D.G. TITLE Direct Submission JOURNAL Submitted (24-JAN-2008) CPDR/Department of Surgery, USUHS, 1530 East Jefferson Street, Rockville, MD 20852, USA FEATURES Location/Qualifiers source 1..1019 /db_xref="H-InvDB:HIT000557778" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="21" /map="21q22.2-q22.3" /sex="male" /tissue_type="prostate cancer" gene 1..1019 /gene="ERG" misc_feature 1..61 /gene="ERG" /note="genomic fusion of TMPRSS2 intron 1" CDS 140..802 /gene="ERG" /note="ERGPC1; lacks DNA binding ETS domain; alternatively spliced" /codon_start=1 /product="TMPRSS2-ERG prostate cancer specific isoform 1" /protein_id="ACA81385.1" /translation="MTASSSSDYGQTSKMSPRVPQQDWLSQPPARVTIKMECNPSQVN GSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTTNERRVIVPADPTLW STDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHL HYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQRITTRPVS YR" polyA_site 998 /gene="ERG" BASE COUNT 311 a 248 c 258 g 202 t ORIGIN 1 gcaggaggcg gaggcggagg cggagggcga ggggcgggga gcgccgcctg gagcgcggca 61 ggaagcctta tcagttgtga gtgaggacca gtcgttgttt gagtgtgcct acggaacgcc 121 acacctggct aagacagaga tgaccgcgtc ctcctccagc gactatggac agacttccaa 181 gatgagccca cgcgtccctc agcaggattg gctgtctcaa cccccagcca gggtcaccat 241 caaaatggaa tgtaacccta gccaggtgaa tggctcaagg aactctcctg atgaatgcag 301 tgtggccaaa ggcgggaaga tggtgggcag cccagacacc gttgggatga actacggcag 361 ctacatggag gagaagcaca tgccaccccc aaacatgacc acgaacgagc gcagagttat 421 cgtgccagca gatcctacgc tatggagtac agaccatgtg cggcagtggc tggagtgggc 481 ggtgaaagaa tatggccttc cagacgtcaa catcttgtta ttccagaaca tcgatgggaa 541 ggaactgtgc aagatgacca aggacgactt ccagaggctc acccccagct acaacgccga 601 catccttctc tcacatctcc actacctcag agagactcct cttccacatt tgacttcaga 661 tgatgttgat aaagccttac aaaactctcc acggttaatg catgctagaa acacaggggg 721 tgcagctttt attttcccaa atacttcagt atatcctgaa gctacgcaaa gaattacaac 781 taggccagtc tcttacagat aaaacaacag aaccagtgcc agaaagcagc cttcccttac 841 atgggcactt ctgccaagca tatgagttca ttgccttgaa gatcaaagtc aaagagaaat 901 ggagagggtg ttgaaatgat cagcgaaaat taaatgtaaa atatattctt attggaagtc 961 tgatgctcta ttatcaataa aggacacata gcaaagataa aaaaaaaaaa aaaaaaaaa //