LOCUS EU395809 1204 bp mRNA linear HUM 22-JAN-2008
DEFINITION Homo sapiens peroxisome proliferator-activated receptor alpha
splice variant (PPARA) mRNA, complete cds, alternatively spliced.
ACCESSION EU395809
VERSION EU395809.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1204)
AUTHORS Jiang,Y., Xie,Z., Liu,H., Liu,M. and Liu,F.
TITLE A novel alternatively spliced peroxisome proliferator-activated
receptor alpha
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1204)
AUTHORS Jiang,Y., Xie,Z., Liu,H., Liu,M. and Liu,F.
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2008) Life Science, The Key Laboratory of
Chemical Biology, Guangdong Province, Division of Life Science,
Graduate School at Shenzhen, Tsinghua University, Shenzhen,
Guangdong 518055, China
FEATURES Location/Qualifiers
source 1..1204
/db_xref="H-InvDB:HIT000484916"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/cell_type="white blood cell"
/PCR_primers="fwd_name: PPA1, fwd_seq: gatggtggacacggaaag,
rev_name: PPA2, rev_seq: gtcggatcctcagtacatgtccctgtagatc"
/PCR_primers="fwd_name: PPA3, fwd_seq:
cgaggtaccatggtggacacggaaag, rev_name: PPA4, rev_seq:
cccgtctcctttgtagtgc"
gene 1..1204
/gene="PPARA"
CDS 1..525
/gene="PPARA"
/note="alternatively spliced"
/codon_start=1
/product="peroxisome proliferator-activated receptor alpha
splice variant"
/protein_id="ABY73535.1"
/translation="MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGED
SSGSFGFTEYQYLGSCPGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIEC
RICGDKASGYHYGVHACEGCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHK
CLSVGMSHNAFCHT"
BASE COUNT 309 a 298 c 319 g 278 t
ORIGIN
1 atggtggaca cggaaagccc actctgcccc ctctccccac tcgaggccgg cgatctagag
61 agcccgttat ctgaagagtt cctgcaagaa atgggaaaca tccaagagat ttcgcaatcc
121 atcggcgagg atagttctgg aagctttggc tttacggaat accagtattt aggaagctgt
181 cctggctcag atggctcggt catcacggac acgctttcac cagcttcgag cccctcctcg
241 gtgacttatc ctgtggtccc cggcagcgtg gacgagtctc ccagtggagc attgaacatc
301 gaatgtagaa tctgcgggga caaggcctca ggctatcatt acggagtcca cgcgtgtgaa
361 ggctgcaagg gcttctttcg gcgaacgatt cgactcaagc tggtgtatga caagtgcgac
421 cgcagctgca agatccagaa aaagaacaga aacaaatgcc agtattgtcg atttcacaag
481 tgcctttctg tcgggatgtc acacaacgcc ttttgtcata catgatatgg agacactgtg
541 tatggctgag aagacgctgg tggccaagct ggtggccaat ggcatccaga acaaggaggc
601 ggaggtccgc atctttcact gctgccagtg cacgtcagtg gagaccgtca cggagctcac
661 ggaattcgcc aaggccatcc caggcttcgc aaacttggac ctgaacgatc aagtgacatt
721 gctaaaatac ggagtttatg aggccatatt cgccatgctg tcttctgtga tgaacaaaga
781 cgggatgctg gtagcgtatg gaaatgggtt tataactcgt gaattcctaa aaagcctaag
841 gaaaccgttc tgtgatatca tggaacccaa gtttgatttt gccatgaagt tcaatgcact
901 ggaactggat gacagtgata tctccctttt tgtggctgct atcatttgct gtggagatcg
961 tcctggcctt ctaaacgtag gacacattga aaaaatgcag gagggtattg tacatgtgct
1021 cagactccac ctgcagagca accacccgga cgatatcttt ctcttcccaa aacttcttca
1081 aaaaatggca gacctccggc agctggtgac ggagcatgcg cagctggtgc agatcatcaa
1141 gaagacggag tcggatgctg cgctgcaccc gctactgcag gagatctaca gggacatgta
1201 ctga
//