LOCUS       EU283339                 828 bp    mRNA    linear   HUM 11-DEC-2007
DEFINITION  Homo sapiens ATG5 autophagy related 5-like (ATG5) mRNA, complete
            cds, alternatively spliced.
ACCESSION   EU283339
VERSION     EU283339.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Mayo,K., Miller,K., Hakami,R., Ulrich,R. and Elliott,L.H.
  TITLE     Expression of autophagy related genes in human CD14 cells infected
            with Streptococcus pyogenes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Mayo,K., Miller,K., Hakami,R., Ulrich,R. and Elliott,L.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2007) Biology, Shippensburg University, 1871 Old
            Main Drive, Shippensburg, PA 17257, USA
FEATURES             Location/Qualifiers
     source          1..828
                     /db_xref="H-InvDB:HIT000484791"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q21"
                     /cell_type="CD14+ monocytes infected with Streptococcus
                     pyogenes"
                     /PCR_primers="fwd_seq: gaccacaagcttccatgacagatgacaaagat,
                     rev_seq: gtcgttggatcctcaatctgttggctgtgg"
     gene            1..828
                     /gene="ATG5"
                     /gene_synonym="APG5"
                     /gene_synonym="APG5L"
                     /gene_synonym="ASP"
                     /gene_synonym="hAPG5"
                     /note="similar to Saccharomyces cerevisiae ATG5"
     CDS             1..828
                     /gene="ATG5"
                     /gene_synonym="APG5"
                     /gene_synonym="APG5L"
                     /gene_synonym="ASP"
                     /gene_synonym="hAPG5"
                     /note="similar to NM_004849; lacks exon 2; alternatively
                     spliced; APG5-APG12 conjugates are required for the
                     formation of pre-autophagosomes and the recruitment of LC3
                     to nascent autophagosomes"
                     /codon_start=1
                     /product="ATG5 autophagy related 5-like"
                     /protein_id="ABX79918.1"
                     /translation="MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSY
                     LTLVTDKVKKHFQKVMRQEDISEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITV
                     HFKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQND
                     RFDQFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDL
                     LKEVCPSAIDPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIIPQPTD"
BASE COUNT          273 a          148 c          175 g          232 t
ORIGIN      
        1 atgacagatg acaaagatgt gcttcgagat gtgtggtttg gacgaattcc aacttgtttc
       61 acgctatatc aggatgagat aactgaaagg gaagcagaac catactattt gcttttgcca
      121 agagtaagtt atttgacgtt ggtaactgac aaagtgaaaa agcactttca gaaggttatg
      181 agacaagaag acattagtga gatatggttt gaatatgaag gcacaccact gaaatggcat
      241 tatccaattg gtttgctatt tgatcttctt gcatcaagtt cagctcttcc ttggaacatc
      301 acagtacatt ttaagagttt tccagaaaaa gaccttctgc actgtccatc taaggatgca
      361 attgaagctc attttatgtc atgtatgaaa gaagctgatg ctttaaaaca taaaagtcaa
      421 gtaatcaatg aaatgcagaa aaaagatcac aagcaactct ggatgggatt gcaaaatgac
      481 agatttgacc agttttgggc catcaatcgg aaactcatgg aatatcctgc agaagaaaat
      541 ggatttcgtt atatcccctt tagaatatat cagacaacga ctgaaagacc tttcattcag
      601 aagctgtttc gtcctgtggc tgcagatgga cagttgcaca cactaggaga tctcctcaaa
      661 gaagtttgtc cttctgctat tgatcctgaa gatggggaaa aaaagaatca agtgatgatt
      721 catggaattg agccaatgtt ggaaacacct ctgcagtggc tgagtgaaca tctgagctac
      781 ccggataatt ttcttcatat tagtatcatc ccacagccaa cagattga
//