LOCUS EU283339 828 bp mRNA linear HUM 11-DEC-2007 DEFINITION Homo sapiens ATG5 autophagy related 5-like (ATG5) mRNA, complete cds, alternatively spliced. ACCESSION EU283339 VERSION EU283339.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 828) AUTHORS Mayo,K., Miller,K., Hakami,R., Ulrich,R. and Elliott,L.H. TITLE Expression of autophagy related genes in human CD14 cells infected with Streptococcus pyogenes JOURNAL Unpublished REFERENCE 2 (bases 1 to 828) AUTHORS Mayo,K., Miller,K., Hakami,R., Ulrich,R. and Elliott,L.H. TITLE Direct Submission JOURNAL Submitted (13-NOV-2007) Biology, Shippensburg University, 1871 Old Main Drive, Shippensburg, PA 17257, USA FEATURES Location/Qualifiers source 1..828 /db_xref="H-InvDB:HIT000484791" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="6" /map="6q21" /cell_type="CD14+ monocytes infected with Streptococcus pyogenes" /PCR_primers="fwd_seq: gaccacaagcttccatgacagatgacaaagat, rev_seq: gtcgttggatcctcaatctgttggctgtgg" gene 1..828 /gene="ATG5" /gene_synonym="APG5" /gene_synonym="APG5L" /gene_synonym="ASP" /gene_synonym="hAPG5" /note="similar to Saccharomyces cerevisiae ATG5" CDS 1..828 /gene="ATG5" /gene_synonym="APG5" /gene_synonym="APG5L" /gene_synonym="ASP" /gene_synonym="hAPG5" /note="similar to NM_004849; lacks exon 2; alternatively spliced; APG5-APG12 conjugates are required for the formation of pre-autophagosomes and the recruitment of LC3 to nascent autophagosomes" /codon_start=1 /product="ATG5 autophagy related 5-like" /protein_id="ABX79918.1" /translation="MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSY LTLVTDKVKKHFQKVMRQEDISEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITV HFKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQND RFDQFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDL LKEVCPSAIDPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIIPQPTD" BASE COUNT 273 a 148 c 175 g 232 t ORIGIN 1 atgacagatg acaaagatgt gcttcgagat gtgtggtttg gacgaattcc aacttgtttc 61 acgctatatc aggatgagat aactgaaagg gaagcagaac catactattt gcttttgcca 121 agagtaagtt atttgacgtt ggtaactgac aaagtgaaaa agcactttca gaaggttatg 181 agacaagaag acattagtga gatatggttt gaatatgaag gcacaccact gaaatggcat 241 tatccaattg gtttgctatt tgatcttctt gcatcaagtt cagctcttcc ttggaacatc 301 acagtacatt ttaagagttt tccagaaaaa gaccttctgc actgtccatc taaggatgca 361 attgaagctc attttatgtc atgtatgaaa gaagctgatg ctttaaaaca taaaagtcaa 421 gtaatcaatg aaatgcagaa aaaagatcac aagcaactct ggatgggatt gcaaaatgac 481 agatttgacc agttttgggc catcaatcgg aaactcatgg aatatcctgc agaagaaaat 541 ggatttcgtt atatcccctt tagaatatat cagacaacga ctgaaagacc tttcattcag 601 aagctgtttc gtcctgtggc tgcagatgga cagttgcaca cactaggaga tctcctcaaa 661 gaagtttgtc cttctgctat tgatcctgaa gatggggaaa aaaagaatca agtgatgatt 721 catggaattg agccaatgtt ggaaacacct ctgcagtggc tgagtgaaca tctgagctac 781 ccggataatt ttcttcatat tagtatcatc ccacagccaa cagattga //