LOCUS       EU283338                 858 bp    mRNA    linear   HUM 11-DEC-2007
DEFINITION  Homo sapiens mutant ATG5 autophagy-related 5-like (ATG5) mRNA,
            complete sequence.
ACCESSION   EU283338
VERSION     EU283338.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 858)
  AUTHORS   Burdge,D.R., Patrie,W.J. and Elliott,L.H.
  TITLE     Expression of autophagy related genes in SNB-19 cell line
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 858)
  AUTHORS   Burdge,D.R., Patrie,W.J. and Elliott,L.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-NOV-2007) Biology, Shippensburg University, 1871 Old
            Main Drive, Shippensburg, PA 17257, USA
FEATURES             Location/Qualifiers
     source          1..858
                     /db_xref="H-InvDB:HIT000484790"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q21"
                     /cell_line="SNB-19"
                     /cell_type="glioma"
                     /PCR_primers="fwd_seq: gaccacaagcttccatgacagatgacaaagat,
                     rev_seq: gtcgttggatcctcaatctgttggctgtgg"
     gene            1..858
                     /gene="ATG5"
                     /gene_synonym="APG5"
                     /gene_synonym="APG5L"
                     /gene_synonym="ASP"
                     /gene_synonym="hAPG5"
                     /note="mutant ATG5 autophagy-related 5-like; similar to
                     Saccharomyces cerevisiae ATG5"
     variation       10^11
                     /gene="ATG5"
                     /gene_synonym="APG5"
                     /gene_synonym="APG5L"
                     /gene_synonym="ASP"
                     /gene_synonym="hAPG5"
                     /note="contains deletion mutation causing reading frame
                     shift"
                     /replace="a"
BASE COUNT          283 a          155 c          180 g          240 t
ORIGIN      
        1 atgacagatg caaagatgtg cttcgagatg tgtggtttgg acgaattcca acttgtttca
       61 cgctatatca ggatgagata actgaaaggg aagcagaacc atactatttg cttttgccaa
      121 gagtaagtta tttgacgttg gtaactgaca aagtgaaaaa gcactttcag aaggttatga
      181 gacaagaaga cattagtgag atatggtttg aatatgaagg cacaccactg aaatggcatt
      241 atccaattgg tttgctattt gatcttcttg catcaagttc agctcttcct tggaacatca
      301 cagtacattt taagagtttt ccagaaaaag accttctgca ctgtccatct aaggatgcaa
      361 ttgaagctca ttttatgtca tgtatgaaag aagctgatgc tttaaaacat aaaagtcaag
      421 taatcaatga aatgcagaaa aaagatcaca agcaactctg gatgggattg caaaatgaca
      481 gatttgacca gttttgggcc atcaatcgga aactcatgga atatcctgca gaagaaaatg
      541 gatttcgtta tatccccttt agaatatatc agacaacgac tgaaagacct ttcattcaga
      601 agctgtttcg tcctgtggct gcagatggac agttgcacac actaggagat ctcctcaaag
      661 aagtttgtcc ttctgctatt gatcctgaag atggggaaaa aaagaatcaa gtgatgattc
      721 atggaattga gccaatgttg gaaacacctc tgcagtggct gagtgaacat ctgagctacc
      781 cggataattt tcttcatatt agtatcatcc cacagccaac agattgaagg atcaactatt
      841 tgcctgaaca gaatcatc
//