LOCUS EU260121 687 bp mRNA linear HUM 26-JUL-2016 DEFINITION Homo sapiens type IV collagen alpha 1 mRNA, partial cds. ACCESSION EU260121 VERSION EU260121.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 687) AUTHORS Sudhakar,A., Nyberg,P., Keshamouni,V.G., Mannam,A.P., Li,J., Sugimoto,H., Cosgrove,D. and Kalluri,R. TITLE Human alpha1 type IV collagen NC1 domain exhibits distinct antiangiogenic activity mediated by alpha1beta1 integrin JOURNAL J. Clin. Invest. 115 (10), 2801-2810 (2005) PUBMED 16151532 REFERENCE 2 (bases 1 to 687) AUTHORS Boosani,C.S. and Sudhakar,A. TITLE Cloning, purification, and characterization of a non-collagenous anti-angiogenic protein domain from human alpha1 type IV collagen expressed in Sf9 cells JOURNAL Protein Expr. Purif. 49 (2), 211-218 (2006) PUBMED 16631378 REFERENCE 3 (bases 1 to 687) AUTHORS Boosani,C.S. and Sudhakar,A. TITLE Direct Submission JOURNAL Submitted (02-NOV-2007) Genetics, Cell Signaling and Tumor Angiogenesis Laboratory, Boys Town National Research Hospital, 555 N., 30 St, Omaha, NE 68131, USA FEATURES Location/Qualifiers source 1..687 /db_xref="H-InvDB:HIT000484774" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="13" /map="13q34" CDS <1..>687 /note="non-collagenous 1 domain from alpha 1 chain of type IV collagen; C-terminus; a1[IV]NC1" /codon_start=1 /product="type IV collagen alpha 1" /protein_id="ABX47006.1" /translation="SVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHG QDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIR PFISRCAVCEAPAMVMAVHSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALAS PGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTH VSRCQVCMRRT" BASE COUNT 152 a 200 c 184 g 151 t ORIGIN 1 tctgttgatc acggcttcct tgtgaccagg catagtcaaa caatagatga cccacagtgt 61 ccttctggga ccaaaattct ttaccacggg tactctttgc tctacgtgca aggcaatgaa 121 cgggcccatg gccaggactt gggcacggcc ggcagctgcc tgcgcaagtt cagtacaatg 181 cccttcctgt tctgcaatat taacaacgtg tgcaactttg catcacgaaa tgactactcg 241 tactggctgt ccacccctga gcccatgccc atgtcaatgg cacccatcac gggggaaaac 301 ataagaccat ttattagtag gtgtgctgtg tgtgaggcgc ctgccatggt gatggccgtg 361 cacagccaga ccattcagat cccaccgtgc cccagcgggt ggtcctcgct gtggatcggc 421 tactcttttg tgatgcacac cagcgctggt gcagaaggct ctggccaagc cctggcgtcc 481 cccggctcct gcctggagga gtttagaagt gcgccattca tcgagtgtca cggccgtggg 541 acctgcaatt actacgcaaa cgcttacagc ttttggctcg ccaccataga gaggagcgag 601 atgttcaaga agcctacgcc gtccaccttg aaggcagggg agctgcgcac gcacgtcagc 661 cgctgccaag tctgtatgag aagaaca //