LOCUS EF488811 2225 bp mRNA linear HUM 12-APR-2007 DEFINITION Homo sapiens prostate specific membrane antigen variant E mRNA, complete cds, alternatively spliced. ACCESSION EF488811 VERSION EF488811.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2225) AUTHORS Cao,K.Y. and Mao,X.P. TITLE High expression of PSM-E correlated to tumor grade in prostate cancer : a new spliced variant of PSMA JOURNAL Unpublished REFERENCE 2 (bases 1 to 2225) AUTHORS Cao,K. TITLE Direct Submission JOURNAL Submitted (10-MAR-2007) Immunology Department, Zhongshan Medical College, Zhongshan 2Nd Road, Guangzhou, Guangdong 510080, China REFERENCE 3 (bases 1 to 2225) AUTHORS Cao,K. TITLE Direct Submission JOURNAL Submitted (12-APR-2007) Immunology Department, Zhongshan Medical College, Zhongshan 2Nd Road, Guangzhou, Guangdong 510080, China REMARK Sequence update by submitter COMMENT On Apr 12, 2007 this sequence version replaced EF488811.1. FEATURES Location/Qualifiers source 1..2225 /db_xref="H-InvDB:HIT000395506" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="6" CDS 106..2220 /note="PSM-E; alternatively spliced" /codon_start=1 /product="prostate specific membrane antigen variant E" /protein_id="ABO93402.2" /translation="MTAGSSYPLFLAAYACTGCLAERLGWFIKSSNEATNITPKHNMK AFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLL SYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLV YVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPAD YFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPS IPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHST NEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHENVRSFGTLKK EGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVD CTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEV FFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRG GMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNF TEIASKFSERLQDFDKSKHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEV KRQIYVAAFTVQAAAETLSEVA" BASE COUNT 655 a 445 c 532 g 593 t ORIGIN 1 ccaccgcgcg ccgcccgcgc tggctgtgcg ctggggcgct ggtgctggcg ggtggcttct 61 ttctcctcgg cttcctcttc ggttaaaagc caactgcaag gtctaatgac tgcaggatct 121 agctatccat tgtttctggc cgcctatgcg tgcactgggt gtctggcaga gaggctgggg 181 tggtttataa aatcctccaa tgaagctact aacattactc caaagcataa tatgaaagca 241 tttttggatg aattgaaagc tgagaacatc aagaagttct tatataattt tacacagata 301 ccacatttag caggaacaga acaaaacttt cagcttgcaa agcaaattca atcccagtgg 361 aaagaatttg gcctggattc tgttgagcta gcacattatg atgtcctgtt gtcctaccca 421 aataagactc atcccaacta catctcaata attaatgaag atggaaatga gattttcaac 481 acatcattat ttgaaccacc tcctccagga tatgaaaatg tttcggatat tgtaccacct 541 ttcagtgctt tctctcctca aggaatgcca gagggcgatc tagtgtatgt taactatgca 601 cgaactgaag acttctttaa attggaacgg gacatgaaaa tcaattgctc tgggaaaatt 661 gtaattgcca gatatgggaa agttttcaga ggaaataagg ttaaaaatgc ccagctggca 721 ggggccaaag gagtcattct ctactccgac cctgctgact actttgctcc tggggtgaag 781 tcctatccag atggttggaa tcttcctgga ggtggtgtcc agcgtggaaa tatcctaaat 841 ctgaatggtg caggagaccc tctcacacca ggttacccag caaatgaata tgcttatagg 901 cgtggaattg cagaggctgt tggtcttcca agtattcctg ttcatccaat tggatactat 961 gatgcacaga agctcctaga aaaaatgggt ggctcagcac caccagatag cagctggaga 1021 ggaagtctca aagtgcccta caatgttgga cctggcttta ctggaaactt ttctacacaa 1081 aaagtcaaga tgcacatcca ctctaccaat gaagtgacaa gaatttacaa tgtgataggt 1141 actctcagag gagcagtgga accagacaga tatgtcattc tgggaggtca ccgggactca 1201 tgggtgtttg gtggtattga ccctcagagt ggagcagctg ttgttcatga aaatgtgagg 1261 agctttggaa cactgaagaa ggaagggtgg agacctagaa gaacaatttt gtttgcaagc 1321 tgggatgcag aagaatttgg tcttcttggt tctactgagt gggcagagga gaattcaaga 1381 ctccttcaag agcgtggcgt ggcttatatt aatgctgact catctataga aggaaactac 1441 actctgagag ttgattgtac accgctgatg tacagcttgg tacacaacct aacaaaagag 1501 ctgaaaagcc ctgatgaagg ctttgaaggc aaatctcttt atgaaagttg gactaaaaaa 1561 agtccttccc cagagttcag tggcatgccc aggataagca aattgggatc tggaaatgat 1621 tttgaggtgt tcttccaacg acttggaatt gcttcaggca gagcacggta tactaaaaat 1681 tgggaaacaa acaaattcag cggctatcca ctgtatcaca gtgtctatga aacatatgag 1741 ttggtggaaa agttttatga tccaatgttt aaatatcacc tcactgtggc ccaggttcga 1801 ggagggatgg tgtttgagct agccaattcc atagtgctcc cttttgattg tcgagattat 1861 gctgtagttt taagaaagta tgctgacaaa atctacagta tttctatgaa acatccacag 1921 gaaatgaaga catacagtgt atcatttgat tcactttttt ctgcagtaaa gaattttaca 1981 gaaattgctt ccaagttcag tgagagactc caggactttg acaaaagcaa gcatgtcatc 2041 tatgctccaa gcagccacaa caagtatgca ggggagtcat tcccaggaat ttatgatgct 2101 ctgtttgata ttgaaagcaa agtggaccct tccaaggcct ggggagaagt gaagagacag 2161 atttatgttg cagccttcac agtgcaggca gctgcagaga ctttgagtga agtagcctaa 2221 gagga //