LOCUS DQ854810 1305 bp mRNA linear HUM 25-JUL-2008
DEFINITION Homo sapiens visual system homeobox 1 transcript variant 4 (VSX1)
mRNA, complete cds.
ACCESSION DQ854810
VERSION DQ854810.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1305)
AUTHORS Hosseini,S.M., Herd,S., Vincent,A.L. and Heon,E.
TITLE Genetic analysis of chromosome 20-related posterior polymorphous
corneal dystrophy: genetic heterogeneity and exclusion of three
candidate genes
JOURNAL Mol. Vis. 14, 71-80 (2008)
PUBMED 18253095
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 1305)
AUTHORS Hosseini,S.M. and Heon,E.
TITLE VSX1 revisited: the role of VSX1 in chromosome 20 related corneal
dystrophies
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 1305)
AUTHORS Hosseini,S.M. and Heon,E.
TITLE Direct Submission
JOURNAL Submitted (14-JUL-2006) Program in Genetics and Genomic Biology,
The Hospital for Sick Children Research Institute, 101 College
Street, Toronto, Ontario M5G 1L7, Canada
FEATURES Location/Qualifiers
source 1..1305
/db_xref="H-InvDB:HIT000393891"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="D900-B2-A7"
/tissue_type="retina"
/dev_stage="adult"
gene 1..1305
/gene="VSX1"
CDS 36..692
/gene="VSX1"
/codon_start=1
/product="visual system homeobox 1 transcript variant 4"
/protein_id="ABI23976.1"
/translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP
APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL
LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG
KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQRVRHWAAEK
"
BASE COUNT 280 a 396 c 371 g 258 t
ORIGIN
1 tccagagagg ctcgcgcctt gcttgctaag gaaccatgac cggccgggac tcgctttccg
61 acgggcgcac tagcagcagg gcgctggtgc ctggcggttc ccctaggggc tcgcgccccc
121 ggggcttcgc catcacggac ctgctgggct tggaggccga gctgccggcg cccgctggcc
181 caggacaggg atctggctgc gagggtccgg cagtcgcgcc gtgcccgggc ccggggcttg
241 acggctccag cctggcgcgt ggggccctac cgctgggact cggcctcctc tgtggcttcg
301 gcacgcagcc gccggcggcc gctcgagcac cctgcctgct cctagcggac gtgccgttcc
361 tgccgcccag gggccccgag cccgctgccc cgctggctcc cagccgtccg ccgcctgcgc
421 tcggccgcca gaagcgcagc gacagcgtct ccacgtccga tgaggacagc cagtctgaag
481 acaggaatga cctaaaggca tcccccacct tgggcaagag gaagaagcgg cggcacagga
541 cagttttcac tgctcaccag ctggaagagt tggagaaggc attcagcgag gcccactacc
601 ctgatgtgta tgcccgagaa atgctggctg tgaaaactga gctccccgaa gaccggatac
661 agagggtgag acattgggct gcagagaaat gaagtgaacc tgctaagccg attgtcaaat
721 ggatgagaaa ctcagagcca aggatcggga aaacaccctt aaagaacgag tgcaaacttc
781 tgctcctgga ggctcccgtt cactggactt tgcaggagac acacaggctc cccagacccc
841 gtggtggtgc ctgatgacct tcagctgaac cctgtaatgc tgctaaagtc tgcccctctg
901 gagaagtgct caggtagcat tgttctgcct caggaagcat gccgattttc ctgtgtcatc
961 cttgatgatc actgctacca gacttgcccc ctgcagggca ccccatgtgc aaggaattca
1021 acaacctagg agttgaaagc attggtctcc caagttcagt gtgttctttt ccgtatctat
1081 taccagctga tgagaataaa cctgcagtca tgacagctag gtcctagtga caggtgcaga
1141 aagctgctct tacagaaact cccctcctta ttaagaggct ttgtctatca ctcggaactg
1201 cttctactca agattatctg ttgaaaggga actgtccata ccagggcatt gttctgactt
1261 ttctggactt cctcaaccca aaatgccttg aagaaaaaaa aaaaa
//