LOCUS       DQ854808                 943 bp    mRNA    linear   HUM 25-JUL-2008
DEFINITION  Homo sapiens visual system homeobox 1 transcript variant 2 (VSX1)
            mRNA, complete cds.
ACCESSION   DQ854808
VERSION     DQ854808.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Hosseini,S.M., Herd,S., Vincent,A.L. and Heon,E.
  TITLE     Genetic analysis of chromosome 20-related posterior polymorphous
            corneal dystrophy: genetic heterogeneity and exclusion of three
            candidate genes
  JOURNAL   Mol. Vis. 14, 71-80 (2008)
   PUBMED   18253095
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Hosseini,S.M. and Heon,E.
  TITLE     VSX1 revisited: the role of VSX1 in chromosome 20 related corneal
            dystrophies
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 943)
  AUTHORS   Hosseini,S.M. and Heon,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUL-2006) Program in Genetics and Genomic Biology,
            The Hospital for Sick Children Research Institute, 101 College
            Street, Toronto, Ontario M5G 1L7, Canada
FEATURES             Location/Qualifiers
     source          1..943
                     /db_xref="H-InvDB:HIT000393889"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="D500-3-4"
                     /tissue_type="retina"
                     /dev_stage="adult"
     gene            1..943
                     /gene="VSX1"
     CDS             36..755
                     /gene="VSX1"
                     /codon_start=1
                     /product="visual system homeobox 1 transcript variant 2"
                     /protein_id="ABI23974.1"
                     /translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP
                     APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL
                     LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG
                     KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVSGVPFLRS
                     KDTTENVSFPHSVSQSAVPSL"
BASE COUNT          194 a          303 c          267 g          179 t
ORIGIN      
        1 tccagagagg ctcgcgcctt gcttgctaag gaaccatgac cggccgggac tcgctttccg
       61 acgggcgcac tagcagcagg gcgctggtgc ctggcggttc ccctaggggc tcgcgccccc
      121 ggggcttcgc catcacggac ctgctgggct tggaggccga gctgccggcg cccgctggcc
      181 caggacaggg atctggctgc gagggtccgg cagtcgcgcc gtgcccgggc ccggggcttg
      241 acggctccag cctggcgcgt ggggccctac cgctgggact cggcctcctc tgtggcttcg
      301 gcacgcagcc gccggcggcc gctcgagcac cctgcctgct cctagcggac gtgccgttcc
      361 tgccgcccag gggccccgag cccgctgccc cgctggctcc cagccgtccg ccgcctgcgc
      421 tcggccgcca gaagcgcagc gacagcgtct ccacgtccga tgaggacagc cagtctgaag
      481 acaggaatga cctaaaggca tcccccacct tgggcaagag gaagaagcgg cggcacagga
      541 cagttttcac tgctcaccag ctggaagagt tggagaaggc attcagcgag gcccactacc
      601 ctgatgtgta tgcccgagaa atgctggctg tgaaaactga gctccccgaa gaccggatac
      661 aggtgtctgg ggtccctttt ctccgctcca aagataccac agagaacgtg tcattcccac
      721 attcagtgag ccaatcagca gtcccttctc tatagccaac acgctccctt tgcatagaaa
      781 ctgagggtcc cttagctgaa ggcaccacaa gagcttgccc ctatgaccct catgcctttt
      841 ttcattttat tattatttag tatcaaatca ttctttaaaa tcacatgata atgtgtgctg
      901 caactagaaa ctataaagat atgtcaatga aaaaaaaaaa aaa
//