LOCUS DQ854807 1968 bp mRNA linear HUM 25-JUL-2008 DEFINITION Homo sapiens visual system homeobox 1 transcript variant 1 (VSX1) mRNA, complete cds. ACCESSION DQ854807 VERSION DQ854807.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1968) AUTHORS Hosseini,S.M., Herd,S., Vincent,A.L. and Heon,E. TITLE Genetic analysis of chromosome 20-related posterior polymorphous corneal dystrophy: genetic heterogeneity and exclusion of three candidate genes JOURNAL Mol. Vis. 14, 71-80 (2008) PUBMED 18253095 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1968) AUTHORS Hosseini,S.M. and Heon,E. TITLE VSX1 revisited: the role of VSX1 in chromosome 20 related corneal dystrophies JOURNAL Unpublished REFERENCE 3 (bases 1 to 1968) AUTHORS Hosseini,S.M. and Heon,E. TITLE Direct Submission JOURNAL Submitted (14-JUL-2006) Program in Genetics and Genomic Biology, The Hospital for Sick Children Research Institute, 101 College Street, Toronto, Ontario M5G 1L7, Canada FEATURES Location/Qualifiers source 1..1968 /db_xref="H-InvDB:HIT000393888" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="I-4" /tissue_type="retina" /dev_stage="adult" gene 1..1968 /gene="VSX1" CDS 36..1133 /gene="VSX1" /codon_start=1 /product="visual system homeobox 1 transcript variant 1" /protein_id="ABI23973.1" /translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK WRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSM GMIRKPGSEDKLAGLWGSDHFKEGSSQSESGSQRGSDKVSPENGLEDVAIDLSSSARQ ETKKVHPGAGAQGGSNSTALEGPQPGKVGAT" BASE COUNT 464 a 498 c 537 g 469 t ORIGIN 1 tccagagagg ctcgcgcctt gcttgctaag gaaccatgac cggccgggac tcgctttccg 61 acgggcgcac tagcagcagg gcgctggtgc ctggcggttc ccctaggggc tcgcgccccc 121 ggggcttcgc catcacggac ctgctgggct tggaggccga gctgccggcg cccgctggcc 181 caggacaggg atctggctgc gagggtccgg cagtcgcgcc gtgcccgggc ccggggcttg 241 acggctccag cctggcgcgt ggggccctac cgctgggact cggcctcctc tgtggcttcg 301 gcacgcagcc gccggcggcc gctcgagcac cctgcctgct cctagcggac gtgccgttcc 361 tgccgcccag gggccccgag cccgctgccc cgctggctcc cagccgtccg ccgcctgcgc 421 tcggccgcca gaagcgcagc gacagcgtct ccacgtccga tgaggacagc cagtctgaag 481 acaggaatga cctaaaggca tcccccacct tgggcaagag gaagaagcgg cggcacagga 541 cagttttcac tgctcaccag ctggaagagt tggagaaggc attcagcgag gcccactacc 601 ctgatgtgta tgcccgagaa atgctggctg tgaaaactga gctccccgaa gaccggatac 661 aggtctggtt tcaaaaccgc agggccaaat ggcgcaagcg ggagaagcgc tggggcggca 721 gcagcgtgat ggccgagtac gggctgtacg gggccatggt gcgccactgc atcccgctgc 781 cagactccgt gctcaactcc gccgagggcg gcctgctggg ctcctgcgcg ccctggctcc 841 tggggatgca taaaaaatcc atggggatga taaggaagcc aggaagtgaa gataagttgg 901 caggactctg gggctctgac cacttcaaag aaggttctag ccagagtgag tcaggatcac 961 agagaggctc agataaagtg agccctgaga atggcttgga agatgtggct attgacctct 1021 ccagctctgc ccggcaggag accaagaaag tgcaccctgg ggctggtgct caaggaggct 1081 ccaactccac ggcactggag gggccccagc cagggaaggt gggagccaca tgagacccac 1141 aggtcccact gtcaaaggct gaaaatgtgc atattcctca ctggcatttt ccaaaagaca 1201 aaaattgtcc aagacatata ctctcagttt gattttcttc tgacaatgtc aagataaaat 1261 gcaatgccac ttgctttaag aggacagatg agtgacctag ggaaaattct atttcattct 1321 agaatggaaa cggttcctta atggcacttt aaccagttaa cttggtgcaa aacttttgat 1381 tctcttttgt agcttgagca gggaggatcc gaagttcaaa aatgatttca ctgctgggca 1441 tcatttgaga tgtgtggttc aatgtactgt atagatgaat aggttaggtc tgatgtcctc 1501 attctcaatt aggaaatata aaattgttta atatccagaa gaatctgata tcatcatagt 1561 gaagactcca tacagacaca tgaatgaatt atattgtctt taccttgaac ttggccttgg 1621 atatttcaat tttcttgtta gggagtaatt ttgtgttttc ttgagtgtca cttgataggc 1681 tatgcatatt ggaattcaaa gaaacccata ctctagtcgt ttctgcattt cctttaaaaa 1741 tagcatggga tcatatttaa acaattgttg gatagctgga aacagtgttt ttaggtcaga 1801 ccaggctttt ggtctttcaa aatttgtgat tgaaagcact ttagtgactt ggattttgta 1861 aatctttcct ttcctgcgtt tcctttgcca tttatttatt ctttaaaaat aaacattttg 1921 tggtgtgttt acttttcaag gcactcctct attacacaaa aaaaaaaa //