LOCUS       DQ854807                1968 bp    mRNA    linear   HUM 25-JUL-2008
DEFINITION  Homo sapiens visual system homeobox 1 transcript variant 1 (VSX1)
            mRNA, complete cds.
ACCESSION   DQ854807
VERSION     DQ854807.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1968)
  AUTHORS   Hosseini,S.M., Herd,S., Vincent,A.L. and Heon,E.
  TITLE     Genetic analysis of chromosome 20-related posterior polymorphous
            corneal dystrophy: genetic heterogeneity and exclusion of three
            candidate genes
  JOURNAL   Mol. Vis. 14, 71-80 (2008)
   PUBMED   18253095
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1968)
  AUTHORS   Hosseini,S.M. and Heon,E.
  TITLE     VSX1 revisited: the role of VSX1 in chromosome 20 related corneal
            dystrophies
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1968)
  AUTHORS   Hosseini,S.M. and Heon,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUL-2006) Program in Genetics and Genomic Biology,
            The Hospital for Sick Children Research Institute, 101 College
            Street, Toronto, Ontario M5G 1L7, Canada
FEATURES             Location/Qualifiers
     source          1..1968
                     /db_xref="H-InvDB:HIT000393888"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="I-4"
                     /tissue_type="retina"
                     /dev_stage="adult"
     gene            1..1968
                     /gene="VSX1"
     CDS             36..1133
                     /gene="VSX1"
                     /codon_start=1
                     /product="visual system homeobox 1 transcript variant 1"
                     /protein_id="ABI23973.1"
                     /translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP
                     APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL
                     LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG
                     KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK
                     WRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSM
                     GMIRKPGSEDKLAGLWGSDHFKEGSSQSESGSQRGSDKVSPENGLEDVAIDLSSSARQ
                     ETKKVHPGAGAQGGSNSTALEGPQPGKVGAT"
BASE COUNT          464 a          498 c          537 g          469 t
ORIGIN      
        1 tccagagagg ctcgcgcctt gcttgctaag gaaccatgac cggccgggac tcgctttccg
       61 acgggcgcac tagcagcagg gcgctggtgc ctggcggttc ccctaggggc tcgcgccccc
      121 ggggcttcgc catcacggac ctgctgggct tggaggccga gctgccggcg cccgctggcc
      181 caggacaggg atctggctgc gagggtccgg cagtcgcgcc gtgcccgggc ccggggcttg
      241 acggctccag cctggcgcgt ggggccctac cgctgggact cggcctcctc tgtggcttcg
      301 gcacgcagcc gccggcggcc gctcgagcac cctgcctgct cctagcggac gtgccgttcc
      361 tgccgcccag gggccccgag cccgctgccc cgctggctcc cagccgtccg ccgcctgcgc
      421 tcggccgcca gaagcgcagc gacagcgtct ccacgtccga tgaggacagc cagtctgaag
      481 acaggaatga cctaaaggca tcccccacct tgggcaagag gaagaagcgg cggcacagga
      541 cagttttcac tgctcaccag ctggaagagt tggagaaggc attcagcgag gcccactacc
      601 ctgatgtgta tgcccgagaa atgctggctg tgaaaactga gctccccgaa gaccggatac
      661 aggtctggtt tcaaaaccgc agggccaaat ggcgcaagcg ggagaagcgc tggggcggca
      721 gcagcgtgat ggccgagtac gggctgtacg gggccatggt gcgccactgc atcccgctgc
      781 cagactccgt gctcaactcc gccgagggcg gcctgctggg ctcctgcgcg ccctggctcc
      841 tggggatgca taaaaaatcc atggggatga taaggaagcc aggaagtgaa gataagttgg
      901 caggactctg gggctctgac cacttcaaag aaggttctag ccagagtgag tcaggatcac
      961 agagaggctc agataaagtg agccctgaga atggcttgga agatgtggct attgacctct
     1021 ccagctctgc ccggcaggag accaagaaag tgcaccctgg ggctggtgct caaggaggct
     1081 ccaactccac ggcactggag gggccccagc cagggaaggt gggagccaca tgagacccac
     1141 aggtcccact gtcaaaggct gaaaatgtgc atattcctca ctggcatttt ccaaaagaca
     1201 aaaattgtcc aagacatata ctctcagttt gattttcttc tgacaatgtc aagataaaat
     1261 gcaatgccac ttgctttaag aggacagatg agtgacctag ggaaaattct atttcattct
     1321 agaatggaaa cggttcctta atggcacttt aaccagttaa cttggtgcaa aacttttgat
     1381 tctcttttgt agcttgagca gggaggatcc gaagttcaaa aatgatttca ctgctgggca
     1441 tcatttgaga tgtgtggttc aatgtactgt atagatgaat aggttaggtc tgatgtcctc
     1501 attctcaatt aggaaatata aaattgttta atatccagaa gaatctgata tcatcatagt
     1561 gaagactcca tacagacaca tgaatgaatt atattgtctt taccttgaac ttggccttgg
     1621 atatttcaat tttcttgtta gggagtaatt ttgtgttttc ttgagtgtca cttgataggc
     1681 tatgcatatt ggaattcaaa gaaacccata ctctagtcgt ttctgcattt cctttaaaaa
     1741 tagcatggga tcatatttaa acaattgttg gatagctgga aacagtgttt ttaggtcaga
     1801 ccaggctttt ggtctttcaa aatttgtgat tgaaagcact ttagtgactt ggattttgta
     1861 aatctttcct ttcctgcgtt tcctttgcca tttatttatt ctttaaaaat aaacattttg
     1921 tggtgtgttt acttttcaag gcactcctct attacacaaa aaaaaaaa
//