LOCUS       DQ786330                 849 bp    mRNA    linear   HUM 14-JUL-2016
DEFINITION  Homo sapiens CD6deltaD3Ex6 (CD6) mRNA, partial cds, alternatively
            spliced.
ACCESSION   DQ786330
VERSION     DQ786330.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Castro,M.A., Oliveira,M.I., Nunes,R.J., Fabre,S., Barbosa,R.,
            Peixoto,A., Brown,M.H., Parnes,J.R., Bismuth,G., Moreira,A.,
            Rocha,B. and Carmo,A.M.
  TITLE     Extracellular isoforms of CD6 generated by alternative splicing
            regulate targeting of CD6 to the immunological synapse
  JOURNAL   J. Immunol. 178 (7), 4351-4361 (2007)
   PUBMED   17371992
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Nunes,R.J. and Carmo,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUN-2006) Cell Activation and Gene Expression,
            Institute of Molecular and Cell Biology, Rua do Campo Alegre, 823,
            Porto 4150-180, Portugal
FEATURES             Location/Qualifiers
     source          1..849
                     /db_xref="H-InvDB:HIT000393383"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /cell_type="peripheral blood mononuclear cells"
                     /PCR_primers="fwd_seq:
                     cgcggatcctctagatgtggctcttcttcgggatcactggattg, rev_seq:
                     ggagcattagctcccgagattccttg"
     gene            1..>849
                     /gene="CD6"
     CDS             15..>849
                     /gene="CD6"
                     /note="extracellular domain isoform; lacks scavenger
                     receptor cysteine-rich domain 3 and linker encoded by
                     exons 5 and 6; alternatively spliced"
                     /codon_start=1
                     /product="CD6deltaD3Ex6"
                     /protein_id="ABH04238.1"
                     /translation="MWLFFGITGLLTAALSGHPSPAPPDQLNTSSAESELWEPGERLP
                     VRLTNGSSSCSGTVEVRLEASWEPACGALWDSRAAEAVCRALGCGGAEAASQLAPPTP
                     ELPPPPAAGNTSVAANATLAGAPALLCSGAEWRLCEVVEHACRSDGRRARVTCAENRA
                     LRLVDGGGACAGRVEMLEHGEWGSVCDDTWDLEDAHVVCRQLGCGWAVQALPGLHFMP
                     GRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVCSESSVTVKIENKESREL
                     ML"
BASE COUNT          134 a          272 c          315 g          128 t
ORIGIN      
        1 cgcggatcct ctagatgtgg ctcttcttcg ggatcactgg attgctgacg gcagccctct
       61 caggtcatcc atctccagcc ccacctgacc agctcaacac cagcagtgca gagagtgagc
      121 tctgggagcc aggggagcgg cttccggtcc gtctgacaaa cgggagcagc agctgcagcg
      181 ggacggtgga ggtgcggctc gaggcgtcct gggagcccgc gtgcggggcg ctctgggaca
      241 gccgcgccgc cgaggccgtg tgccgagcac tgggctgcgg cggggcggag gccgcctctc
      301 agctcgcccc gccgacccct gagctgccgc ccccgcctgc agccgggaac accagcgtag
      361 cagctaatgc cactctggcc ggggcgcccg ccctcctgtg cagcggcgcc gagtggcggc
      421 tctgcgaggt ggtggagcac gcgtgccgca gcgacgggag gcgggcccgt gtcacctgtg
      481 cagagaaccg cgcgctgcgc ctggtggacg gtggcggcgc ctgcgccggc cgcgtggaga
      541 tgctggagca tggcgagtgg ggatcagtgt gcgatgacac ttgggacctg gaggacgccc
      601 acgtggtgtg caggcaactg ggctgcggct gggcagtcca ggccctgccc ggcttgcact
      661 tcatgcccgg ccgcgggcct atccaccggg accaggtgaa ctgctcgggg gccgaagctt
      721 acctgtggga ctgcccgggg ctgccaggac agcactactg cggccacaaa gaggacgcgg
      781 gcgtggtgtg ctcagaatct tctgtgacag tgaaaataga gaacaaggaa tctcgggagc
      841 taatgctcc
//