LOCUS DQ786330 849 bp mRNA linear HUM 14-JUL-2016 DEFINITION Homo sapiens CD6deltaD3Ex6 (CD6) mRNA, partial cds, alternatively spliced. ACCESSION DQ786330 VERSION DQ786330.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 849) AUTHORS Castro,M.A., Oliveira,M.I., Nunes,R.J., Fabre,S., Barbosa,R., Peixoto,A., Brown,M.H., Parnes,J.R., Bismuth,G., Moreira,A., Rocha,B. and Carmo,A.M. TITLE Extracellular isoforms of CD6 generated by alternative splicing regulate targeting of CD6 to the immunological synapse JOURNAL J. Immunol. 178 (7), 4351-4361 (2007) PUBMED 17371992 REFERENCE 2 (bases 1 to 849) AUTHORS Nunes,R.J. and Carmo,A.M. TITLE Direct Submission JOURNAL Submitted (19-JUN-2006) Cell Activation and Gene Expression, Institute of Molecular and Cell Biology, Rua do Campo Alegre, 823, Porto 4150-180, Portugal FEATURES Location/Qualifiers source 1..849 /db_xref="H-InvDB:HIT000393383" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /cell_type="peripheral blood mononuclear cells" /PCR_primers="fwd_seq: cgcggatcctctagatgtggctcttcttcgggatcactggattg, rev_seq: ggagcattagctcccgagattccttg" gene 1..>849 /gene="CD6" CDS 15..>849 /gene="CD6" /note="extracellular domain isoform; lacks scavenger receptor cysteine-rich domain 3 and linker encoded by exons 5 and 6; alternatively spliced" /codon_start=1 /product="CD6deltaD3Ex6" /protein_id="ABH04238.1" /translation="MWLFFGITGLLTAALSGHPSPAPPDQLNTSSAESELWEPGERLP VRLTNGSSSCSGTVEVRLEASWEPACGALWDSRAAEAVCRALGCGGAEAASQLAPPTP ELPPPPAAGNTSVAANATLAGAPALLCSGAEWRLCEVVEHACRSDGRRARVTCAENRA LRLVDGGGACAGRVEMLEHGEWGSVCDDTWDLEDAHVVCRQLGCGWAVQALPGLHFMP GRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVCSESSVTVKIENKESREL ML" BASE COUNT 134 a 272 c 315 g 128 t ORIGIN 1 cgcggatcct ctagatgtgg ctcttcttcg ggatcactgg attgctgacg gcagccctct 61 caggtcatcc atctccagcc ccacctgacc agctcaacac cagcagtgca gagagtgagc 121 tctgggagcc aggggagcgg cttccggtcc gtctgacaaa cgggagcagc agctgcagcg 181 ggacggtgga ggtgcggctc gaggcgtcct gggagcccgc gtgcggggcg ctctgggaca 241 gccgcgccgc cgaggccgtg tgccgagcac tgggctgcgg cggggcggag gccgcctctc 301 agctcgcccc gccgacccct gagctgccgc ccccgcctgc agccgggaac accagcgtag 361 cagctaatgc cactctggcc ggggcgcccg ccctcctgtg cagcggcgcc gagtggcggc 421 tctgcgaggt ggtggagcac gcgtgccgca gcgacgggag gcgggcccgt gtcacctgtg 481 cagagaaccg cgcgctgcgc ctggtggacg gtggcggcgc ctgcgccggc cgcgtggaga 541 tgctggagca tggcgagtgg ggatcagtgt gcgatgacac ttgggacctg gaggacgccc 601 acgtggtgtg caggcaactg ggctgcggct gggcagtcca ggccctgccc ggcttgcact 661 tcatgcccgg ccgcgggcct atccaccggg accaggtgaa ctgctcgggg gccgaagctt 721 acctgtggga ctgcccgggg ctgccaggac agcactactg cggccacaaa gaggacgcgg 781 gcgtggtgtg ctcagaatct tctgtgacag tgaaaataga gaacaaggaa tctcgggagc 841 taatgctcc //