LOCUS DQ656039 974 bp mRNA linear HTC 13-AUG-2007 DEFINITION Homo sapiens clone UGLsupplB, mRNA sequence. ACCESSION DQ656039 VERSION DQ656039.2 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 974) AUTHORS Denoeud,F., Kapranov,P., Ucla,C., Frankish,A., Castelo,R., Drenkow,J., Lagarde,J., Alioto,T., Manzano,C., Chrast,J., Dike,S., Wyss,C., Henrichsen,C.N., Holroyd,N., Dickson,M.C., Taylor,R., Hance,Z., Foissac,S., Myers,R.M., Rogers,J., Hubbard,T., Harrow,J., Guigo,R., Gingeras,T.R., Antonarakis,S.E. and Reymond,A. TITLE Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions JOURNAL Genome Res. 17 (6), 746-759 (2007) PUBMED 17567994 REFERENCE 2 (bases 1 to 974) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Long Distance and Global Transcription Networks Characterize ENCODE Regions JOURNAL Unpublished REFERENCE 3 (bases 1 to 974) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Direct Submission JOURNAL Submitted (18-MAY-2006) National Human Genome Research Institute, Bethesda, MD 20892, USA REFERENCE 4 (bases 1 to 974) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Direct Submission JOURNAL Submitted (10-AUG-2007) National Human Genome Research Institute, Bethesda, MD 20892, USA REMARK Sequence update by submitter COMMENT On Aug 13, 2007 this sequence version replaced DQ656039.1. FEATURES Location/Qualifiers source 1..974 /db_xref="H-InvDB:HIT000393152" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="21" /clone="UGLsupplB" /note="obtained by 5' RACE" misc_feature 1..974 /note="similar to TCP10L" BASE COUNT 287 a 204 c 300 g 183 t ORIGIN 1 gggccttctc aacgcctcag tacctcggcg ggaccgccat ggttctgctg cacgtgaagc 61 ggggcgacga gagccagttc ctgctgcagg cgcctgggag taccgagctg gaggagctca 121 cggtgcaggt ggcccgggtc tataatgggc ggctcaaggt gcagcgcctc tgctcagaaa 181 tggaagaatt agccgaacat ggcatatttc tccctcctaa tatgcaagga ctgaccgatg 241 atcagattga agaattgaaa ttgaaggatg aatggggtga aaaatgcgta cccagcggag 301 gtgcagtgtt taaaaaggat gatattggac gaaggaatgg gcaagctcca aatgagaaga 361 tgaagcaagt gttaaagaag actatagaag aagccaaagc aataatatct aagaaacaag 421 tggaagccgg tgtctgtgtt accatggaga tggtgaaaga tgccttggac cagcttcgag 481 gcgcggtgat gattgtttac cccatggggt tgccaccgta tgatcccatc cgcatggagt 541 ttgaaaataa ggaaggcttg tcgggaacac aggcagggct caacgtcatt aaagaggcag 601 aggcgcagct gtggtgggca gccaaggagc tgagaagaac gaagaagctt tcagactacg 661 tggggaagaa tgaaaaaacc aaaattatcg ccaagattca gcaaccatta cagcagcaga 721 tcatcagact ccaccaagag cttgggagac agaagtctct gtgggctgat gttcatggaa 781 aactccggag tcatatagat gctttgaggg agcagaacat ggagctccga gaaaagctga 841 gagctctgca gctgcagcgg tggaaagcca ggaagaaatc tgcagcgtcc ccacacgcgg 901 ggcaagaatc gcacactctg gcattggaac aggtactgag ggttgagaag gcccaggtac 961 tgaggcattg gaac //