LOCUS DQ656004 220 bp mRNA linear HTC 13-AUG-2007 DEFINITION Homo sapiens clone Affy08256B03, mRNA sequence. ACCESSION DQ656004 VERSION DQ656004.2 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 220) AUTHORS Denoeud,F., Kapranov,P., Ucla,C., Frankish,A., Castelo,R., Drenkow,J., Lagarde,J., Alioto,T., Manzano,C., Chrast,J., Dike,S., Wyss,C., Henrichsen,C.N., Holroyd,N., Dickson,M.C., Taylor,R., Hance,Z., Foissac,S., Myers,R.M., Rogers,J., Hubbard,T., Harrow,J., Guigo,R., Gingeras,T.R., Antonarakis,S.E. and Reymond,A. TITLE Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions JOURNAL Genome Res. 17 (6), 746-759 (2007) PUBMED 17567994 REFERENCE 2 (bases 1 to 220) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Long Distance and Global Transcription Networks Characterize ENCODE Regions JOURNAL Unpublished REFERENCE 3 (bases 1 to 220) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Direct Submission JOURNAL Submitted (18-MAY-2006) National Human Genome Research Institute, Bethesda, MD 20892, USA REFERENCE 4 (bases 1 to 220) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Direct Submission JOURNAL Submitted (10-AUG-2007) National Human Genome Research Institute, Bethesda, MD 20892, USA REMARK Sequence update by submitter COMMENT On Aug 13, 2007 this sequence version replaced DQ656004.1. FEATURES Location/Qualifiers source 1..220 /db_xref="H-InvDB:HIT000393117" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="5" /clone="Affy08256B03" /note="obtained by 5' RACE" BASE COUNT 50 a 46 c 51 g 73 t ORIGIN 1 tagtggggtc aaaatcatga tcctcagaag acaaagaccc aagggatgcc agtgcctctg 61 ttctccattc cattcaaagg atatgctcca ggtttagcat gagatggcag acttgaatct 121 tctgtactct tgtttggctt ctcctagtgt gaacatcttg ctgcgttgag tgtaactctc 181 taaattggta attgctgtgg ttgtgctgtc attcttgtca //