LOCUS DQ655998 526 bp mRNA linear HTC 13-AUG-2007 DEFINITION Homo sapiens clone Affy08246E10, mRNA sequence. ACCESSION DQ655998 VERSION DQ655998.2 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 526) AUTHORS Denoeud,F., Kapranov,P., Ucla,C., Frankish,A., Castelo,R., Drenkow,J., Lagarde,J., Alioto,T., Manzano,C., Chrast,J., Dike,S., Wyss,C., Henrichsen,C.N., Holroyd,N., Dickson,M.C., Taylor,R., Hance,Z., Foissac,S., Myers,R.M., Rogers,J., Hubbard,T., Harrow,J., Guigo,R., Gingeras,T.R., Antonarakis,S.E. and Reymond,A. TITLE Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions JOURNAL Genome Res. 17 (6), 746-759 (2007) PUBMED 17567994 REFERENCE 2 (bases 1 to 526) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Long Distance and Global Transcription Networks Characterize ENCODE Regions JOURNAL Unpublished REFERENCE 3 (bases 1 to 526) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Direct Submission JOURNAL Submitted (18-MAY-2006) National Human Genome Research Institute, Bethesda, MD 20892, USA REFERENCE 4 (bases 1 to 526) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Direct Submission JOURNAL Submitted (10-AUG-2007) National Human Genome Research Institute, Bethesda, MD 20892, USA REMARK Sequence update by submitter COMMENT On Aug 13, 2007 this sequence version replaced DQ655998.1. FEATURES Location/Qualifiers source 1..526 /db_xref="H-InvDB:HIT000393111" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="18" /clone="Affy08246E10" /note="obtained by 5' RACE" misc_feature 1..526 /note="similar to SERPINB10" BASE COUNT 130 a 120 c 115 g 161 t ORIGIN 1 tcatttgact ccctggtctc tgttaaattg aagcacctgg gccatttggg ctgcagtggt 61 acctttggcg cccaaataca ccatggtcaa ggaagttgag atgctccagg aagaaaagaa 121 gatattttta ccctgagcgg attcagctag cttttcgctc aactccaggg caaactggtt 181 gattgatgtt gctagagcgt ccattgagga accctcaact tcatcttcag ccattttgtc 241 tttgctggtc cacttgttga gtttgtcata ggttatttca ctttccagca gctccaagcc 301 agtggacaca tcggcaattt catctggaag caacaagaac atgctaacat ctccagcata 361 tgggagttct agaatctgag cctttaggtc ttctatgtat ccaatgttta gcttttcacg 421 caagtacatc atctgtacag gtgtgcgctg agccgagttt acacggagag gataaagccc 481 atttagtttc ttctcaaatg gagttttcca ctttcctttg aagtaa //