LOCUS DQ655961 754 bp mRNA linear HTC 13-AUG-2007
DEFINITION Homo sapiens clone UGL9d05, mRNA sequence.
ACCESSION DQ655961
VERSION DQ655961.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 754)
AUTHORS Denoeud,F., Kapranov,P., Ucla,C., Frankish,A., Castelo,R.,
Drenkow,J., Lagarde,J., Alioto,T., Manzano,C., Chrast,J., Dike,S.,
Wyss,C., Henrichsen,C.N., Holroyd,N., Dickson,M.C., Taylor,R.,
Hance,Z., Foissac,S., Myers,R.M., Rogers,J., Hubbard,T., Harrow,J.,
Guigo,R., Gingeras,T.R., Antonarakis,S.E. and Reymond,A.
TITLE Prominent use of distal 5' transcription start sites and discovery
of a large number of additional exons in ENCODE regions
JOURNAL Genome Res. 17 (6), 746-759 (2007)
PUBMED 17567994
REFERENCE 2 (bases 1 to 754)
AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
Gingeras,T.R.
CONSRTM ENCODE Consortium
TITLE Long Distance and Global Transcription Networks Characterize ENCODE
Regions
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 754)
AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
Gingeras,T.R.
CONSRTM ENCODE Consortium
TITLE Direct Submission
JOURNAL Submitted (18-MAY-2006) National Human Genome Research Institute,
Bethesda, MD 20892, USA
REFERENCE 4 (bases 1 to 754)
AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
Gingeras,T.R.
CONSRTM ENCODE Consortium
TITLE Direct Submission
JOURNAL Submitted (10-AUG-2007) National Human Genome Research Institute,
Bethesda, MD 20892, USA
REMARK Sequence update by submitter
COMMENT On Aug 13, 2007 this sequence version replaced DQ655961.1.
FEATURES Location/Qualifiers
source 1..754
/db_xref="H-InvDB:HIT000393074"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="21"
/clone="UGL9d05"
/note="obtained by 5' RACE"
misc_feature 1..754
/note="similar to IL10RB"
BASE COUNT 238 a 140 c 158 g 218 t
ORIGIN
1 ttgaaccacc agagtttgag attgttggtt ttaccaacca cattaatgtg atggtgaaat
61 ttccatctat tgttgtggaa gaattacagt ttgatttatc tctcgtcatt gaagaacagt
121 cagagggaat tgttaagaag cataaacccg gaataaaagg aaacatgagt ggaaatttca
181 cctatatcat tgacaagtta attccaaaca cgaactactg tgtatctgtt tatttagagc
241 acagtgatga gcaagcagta ataaagtctc ccttaaaatg caccctcctt ccacctgacc
301 aggaatcagt tataggatat tccaagataa atgcatgaat actaccttga cggaatgtga
361 tttctcaagt ctttccaagt atggtgacca caccttgaga gtcagggctg aatttgcaga
421 tgagcattca gactgggtaa acatcacctt ctgtcctgtg gatgacacca ttattggacc
481 ccctggaatg caagtagaag tacttgctga ttctttacat atgcgtttct tagcccctaa
541 aattgagaat gaatacgaaa cttggactat gaagaatgtg tataactcat ggacttataa
601 tgtgcaatac tggaaaaacg gtactgatga aaagtttcaa attactcccc agtatgactt
661 tgaggtcctc agaaacctgg agccatggac aacttattgt gttcaagttc gagggtttct
721 tcctgatcgg aacaaagctg gggaatggag tgaa
//