LOCUS DQ655926 294 bp mRNA linear HTC 13-AUG-2007
DEFINITION Homo sapiens clone UGL12a05, mRNA sequence.
ACCESSION DQ655926
VERSION DQ655926.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 294)
AUTHORS Denoeud,F., Kapranov,P., Ucla,C., Frankish,A., Castelo,R.,
Drenkow,J., Lagarde,J., Alioto,T., Manzano,C., Chrast,J., Dike,S.,
Wyss,C., Henrichsen,C.N., Holroyd,N., Dickson,M.C., Taylor,R.,
Hance,Z., Foissac,S., Myers,R.M., Rogers,J., Hubbard,T., Harrow,J.,
Guigo,R., Gingeras,T.R., Antonarakis,S.E. and Reymond,A.
TITLE Prominent use of distal 5' transcription start sites and discovery
of a large number of additional exons in ENCODE regions
JOURNAL Genome Res. 17 (6), 746-759 (2007)
PUBMED 17567994
REFERENCE 2 (bases 1 to 294)
AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
Gingeras,T.R.
CONSRTM ENCODE Consortium
TITLE Long Distance and Global Transcription Networks Characterize ENCODE
Regions
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 294)
AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
Gingeras,T.R.
CONSRTM ENCODE Consortium
TITLE Direct Submission
JOURNAL Submitted (18-MAY-2006) National Human Genome Research Institute,
Bethesda, MD 20892, USA
REFERENCE 4 (bases 1 to 294)
AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
Gingeras,T.R.
CONSRTM ENCODE Consortium
TITLE Direct Submission
JOURNAL Submitted (10-AUG-2007) National Human Genome Research Institute,
Bethesda, MD 20892, USA
REMARK Sequence update by submitter
COMMENT On Aug 13, 2007 this sequence version replaced DQ655926.1.
FEATURES Location/Qualifiers
source 1..294
/db_xref="H-InvDB:HIT000393039"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="16"
/clone="UGL12a05"
/note="obtained by 5' RACE"
misc_feature 1..294
/note="similar to HBA2"
BASE COUNT 51 a 111 c 80 g 52 t
ORIGIN
1 ttgttcctcc tccagggcca cagcaagaag gtggccgacg cgctgaccaa cgccgtggcg
61 cacgtggacg acatgcccaa cgcgctgtcc gccctgagcg acctgcacgc gcacaagctt
121 cgggtggacc cggtcaactt caagctccta agccactgcc tgctggtgac cctggccgcc
181 cacctccccg ccgagttcac ccctgcggtg cacgcctccc tggacaagtt cctggcttct
241 gtgagcaccg tgctgacctc caaataccgt taagctggag cctcggtagc cgta
//