LOCUS DQ655917 993 bp mRNA linear HTC 13-AUG-2007 DEFINITION Homo sapiens clone UGL16c06, mRNA sequence. ACCESSION DQ655917 VERSION DQ655917.2 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 993) AUTHORS Denoeud,F., Kapranov,P., Ucla,C., Frankish,A., Castelo,R., Drenkow,J., Lagarde,J., Alioto,T., Manzano,C., Chrast,J., Dike,S., Wyss,C., Henrichsen,C.N., Holroyd,N., Dickson,M.C., Taylor,R., Hance,Z., Foissac,S., Myers,R.M., Rogers,J., Hubbard,T., Harrow,J., Guigo,R., Gingeras,T.R., Antonarakis,S.E. and Reymond,A. TITLE Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions JOURNAL Genome Res. 17 (6), 746-759 (2007) PUBMED 17567994 REFERENCE 2 (bases 1 to 993) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Long Distance and Global Transcription Networks Characterize ENCODE Regions JOURNAL Unpublished REFERENCE 3 (bases 1 to 993) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Direct Submission JOURNAL Submitted (18-MAY-2006) National Human Genome Research Institute, Bethesda, MD 20892, USA REFERENCE 4 (bases 1 to 993) AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J., Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S., Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P., Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C., Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K., Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S., Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C., Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I., Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P., Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C., Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S., Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J., Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X., Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y., Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T., Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y., Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and Gingeras,T.R. CONSRTM ENCODE Consortium TITLE Direct Submission JOURNAL Submitted (10-AUG-2007) National Human Genome Research Institute, Bethesda, MD 20892, USA REMARK Sequence update by submitter COMMENT On Aug 13, 2007 this sequence version replaced DQ655917.1. FEATURES Location/Qualifiers source 1..993 /db_xref="H-InvDB:HIT000393030" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="5" /clone="UGL16c06" /note="obtained by 5' RACE" misc_feature 1..993 /note="similar to FGF1" BASE COUNT 251 a 258 c 270 g 214 t ORIGIN 1 taaatataaa gtgcttgtcc ttagcctttc tgtgggcata ccagtgtcag ctgcacttgt 61 aggggcccaa gtgcctcatg acccactcgg cagccttcct ctccaggatc cccaaggcta 121 ggaggccaac ctactaacag gtgggtgggt atggtgtgtg gtttcactca gttcttctca 181 tggggtttct ctgagctcca ttcataccag aaagggagca ggagagagag gacaagtgga 241 tccaacagcc ttcgctccag gggaatcagg gcatcgcctc cttttctggg aggacactcc 301 cttctgatgg tgaatgggaa ctcccttcct cctgcagcag cctgcctgca gccgtcctgg 361 tagaacagtg tggacattgc agaagctgtc actgccccag aaagaaagca ccccagagcc 421 aaggcaaaga gtcttgaaag cgccacaagc agcagctgct gagccatggc tgaaggggaa 481 atcaccacct tcacagccct gaccgagaag tttaatctgc ctccagggaa ttacaagaag 541 cccaaactcc tctactgtag caacgggggc cacttcctga ggatccttcc ggatggcaca 601 gtggatggga caagggacag gagcgaccag cacattcagc tgcagctcag tgcggaaagc 661 gtgggggagg tgtatataaa gagtaccgag actggccagt acttggccat ggacaccgac 721 gggcttttat acggctcaca gacaccaaat gaggaatgtt tgttcctgga aaggctggag 781 gagaaccatt acaacaccta tatatccaag aagcatgcag agaagaattg gtttgttggc 841 ctcaagaaga atgggagctg caaacgcggt cctcggactc actatggcca gaaagcaatc 901 ttgtttctcc ccctgccagt ctcttctgat taaagagatc tgttctgggt gttgaccact 961 ccagagaagt ttcgaggggt cctcacctgg tta //