LOCUS DQ655909 403 bp mRNA linear HTC 13-AUG-2007
DEFINITION Homo sapiens clone Affy08252B09, mRNA sequence.
ACCESSION DQ655909
VERSION DQ655909.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 403)
AUTHORS Denoeud,F., Kapranov,P., Ucla,C., Frankish,A., Castelo,R.,
Drenkow,J., Lagarde,J., Alioto,T., Manzano,C., Chrast,J., Dike,S.,
Wyss,C., Henrichsen,C.N., Holroyd,N., Dickson,M.C., Taylor,R.,
Hance,Z., Foissac,S., Myers,R.M., Rogers,J., Hubbard,T., Harrow,J.,
Guigo,R., Gingeras,T.R., Antonarakis,S.E. and Reymond,A.
TITLE Prominent use of distal 5' transcription start sites and discovery
of a large number of additional exons in ENCODE regions
JOURNAL Genome Res. 17 (6), 746-759 (2007)
PUBMED 17567994
REFERENCE 2 (bases 1 to 403)
AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
Gingeras,T.R.
CONSRTM ENCODE Consortium
TITLE Long Distance and Global Transcription Networks Characterize ENCODE
Regions
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 403)
AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
Gingeras,T.R.
CONSRTM ENCODE Consortium
TITLE Direct Submission
JOURNAL Submitted (18-MAY-2006) National Human Genome Research Institute,
Bethesda, MD 20892, USA
REFERENCE 4 (bases 1 to 403)
AUTHORS Guigo,R., Denoeud,F., Reymond,A., Kapranov,P., Rozowsky,J.,
Zheng,D., Castelo,R., Frankish,A., Harrow,J., Ghosh,S.,
Sandelin,A., Hofacker,I.L., Baertsch,R., Keefe,D., Flicek,P.,
Dike,S., Cheng,J., Lagarde,J., Abril,J.F., Shahab,A., Flamm,C.,
Fried,C., Hackermuller,J., Hertel,J., Lindemeyer,M., Missal,K.,
Tanzer,A., Washietl,S., Korbel,J., Emanuelsson,O., Pedersen,J.S.,
Holroyd,N., Taylor,R., Swarbreck,D., Matthews,N., Dickson,M.C.,
Thomas,D.J., Weirauch,M.T., Gilbert,J., Drenkow,J., Bell,I.,
Zhao,X.-D., Srinivasan,K.G., Sung,W.-K., Ooi,H.S., Chiu,K.P.,
Foissac,S., Alioto,T., Choo,S.W., Choo,C.Y., Ucla,C., Manzano,C.,
Wyss,C., Cheung,E., Clarke,T., Brown,J.B., Ganesh,M., Patel,S.,
Tammana,H., Chrast,J., Henrichsen,C.N., Kai,C., Kawai,J.,
Nagalakshmi,U., Wu,J., Lian,Z., Lian,J., Newburger,P., Zhang,X.,
Bickel,P., Mattick,J.S., Carninci,P., Hayashizaki,Y.,
Weissman,S.M., Dermitzakis,E., Margulies,E.H., Hubbard,T.,
Myers,R.M., Rogers,J., Stadler,P.F., Lowe,T.M., Wei,C.-L., Ruan,Y.,
Snyder,M., Birney,E., Gersten,M., Antonarakis,S.E. and
Gingeras,T.R.
CONSRTM ENCODE Consortium
TITLE Direct Submission
JOURNAL Submitted (10-AUG-2007) National Human Genome Research Institute,
Bethesda, MD 20892, USA
REMARK Sequence update by submitter
COMMENT On Aug 13, 2007 this sequence version replaced DQ655909.1.
FEATURES Location/Qualifiers
source 1..403
/db_xref="H-InvDB:HIT000393022"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="21"
/clone="Affy08252B09"
/note="obtained by 5' RACE"
misc_feature 1..403
/note="similar to TCP10L"
BASE COUNT 81 a 114 c 84 g 124 t
ORIGIN
1 tgtgtgggga cgctgcagat ttcttcctgg ctttccaccg ctgcagctgc agagctctca
61 gcttttctcg gagctccatg ttctgctccc tcaaagcatc tatatgactc cggagttttc
121 catgaacatc agcccacaga gacttctgtc tcccaagctc ttggtggagt ctgatgatct
181 gctgctgtaa tggctgtgtt cccgacaagt cttccttatt ttcaaactcc atgcggatgg
241 gatcatacgg tggcaacccc atggggtaaa caatcatcac cgcgcctcga agctggtcca
301 aggcatcttt caccatctcc atggtaacac agacaccggc ttccacttgt ttcttagata
361 ttattgcttt ggcttcttct atagtcttct ttaacacttg cta
//