LOCUS DQ421853 1502 bp mRNA linear HUM 26-JUL-2016
DEFINITION Homo sapiens synaptojanin 1 mRNA, alternative spliced, partial cds.
ACCESSION DQ421853
VERSION DQ421853.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1502)
AUTHORS Tsyba,L., Gryaznova,T., Dergai,O., Dergai,M., Skrypkina,I.,
Kropyvko,S., Boldyryev,O., Nikolaienko,O., Novokhatska,O. and
Rynditch,A.
TITLE Alternative splicing affecting the SH3A domain controls the binding
properties of intersectin 1 in neurons
JOURNAL Biochem. Biophys. Res. Commun. 372 (4), 929-934 (2008)
PUBMED 18539136
REFERENCE 2 (bases 1 to 1502)
AUTHORS Tsyba,L., Skrypkina,I., Gryaznova,T., Kropyvko,S., Dergaj,O.,
Dergaj,M. and Rynditch,A.
TITLE Effect of alternative splicing on regulation of intersectin 1
function
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 1502)
AUTHORS Tsyba,L., Skrypkina,I., Kropyvko,S. and Rynditch,A.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2006) Department of Molecular Oncogenetics,
Institute of Molecular Biology and Genetics of National Academy,
150 Zabolotnogo Street, Kyiv 03143, Ukraine
FEATURES Location/Qualifiers
source 1..1502
/db_xref="H-InvDB:HIT000343137"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="21"
/map="21q22.2"
/tissue_type="muscle"
/dev_stage="12 week-old embryo"
gene <1..>1502
/gene="SYNJ1"
CDS <1..>1502
/gene="SYNJ1"
/note="alternatively spliced"
/codon_start=3
/product="synaptojanin 1"
/protein_id="ABD77575.1"
/translation="EVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSL
PIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAP
PQRPPPPSGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPE
SQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNL
ETPPQPPPRSRSSHSLPSEASSQPQVKTNGISDGKRESPLKIDPFEDLSFNLLAVSKA
QLSVQTSPVPTPDPKRLIQLPSATQSNVLSSVSCMPTMPPIPARSQSQENMRSSPNPF
ITGLTRTNPFSDRTAAPGNPFRAKSEESEATSWFSKEEPVTISPFPSLQPLGHNKSRA
SSSLDGFKDSFDLQGQSTLKISNPKGWVTFEEEEDFGVKGKSKSACSDLLGNQPSSFS
GSNLTLNDDWNKGTNVSFCVLPSRRPPPPPVPLLPPGTSPPVDPFTTLAS"
BASE COUNT 373 a 478 c 308 g 343 t
ORIGIN
1 ctgaagtgga ggaacttctt cctcagcatc tccagccatc ttcaagttcc ggccttggta
61 cttcccccag ctcttcaccc cgaactagtc cctgccagtc acctacaata tcagagggtc
121 ctgtaccttc ccttcccatc agaccaagcc gagcaccgtc aagaactcct gggcctccca
181 gtgcacagag ttctcctatt gacgcgcagc cagcaacgcc gctgccgcag aaagaccccg
241 cccagccctt ggagcccaag cggccgccgc cgccccgccc ggtcgcccct cccacacgcc
301 cggctccccc acagagacct cctccgcctt caggacgcag tcagccttca cctcaagcag
361 gacttgcagg cccaggacct gctggataca gtacagccag accgacgatt cctcctcgtg
421 ctggagttat cagtgcccca cagagccacg cgcgggcatc tgctggaaga ctgactcctg
481 aaagccaaag caaaacatca gaaacgtcga aaggttcaac tttccttcct gaaccactga
541 agcctcaggc tgcttttcct ccgcagtctt ctttgccccc gcctgctcaa aggttgcaag
601 agcctcttgt ccctgtggca gcacctatgc ctcagtctgg cccccagcca aatttggaaa
661 ccccaccaca accaccacct cgaagcaggt catcccatag cttgccttca gaagcttcct
721 cacaaccgca agtaaaaaca aatggaatct ctgatggcaa aagagaatca ccattaaaga
781 ttgacccatt tgaagatctg tcatttaatc tgcttgctgt atcaaaggct cagctatctg
841 ttcaaacgtc acctgttccc accccagacc caaagaggtt gattcagttg ccttctgcaa
901 cgcaaagtaa tgttttgagt tctgtaagtt gcatgccaac aatgcctcca attccagctc
961 ggagtcaatc ccaggaaaat atgcgaagtt ctccaaaccc atttattact ggcttaacca
1021 ggacaaatcc tttcagtgac aggactgctg ctcctggaaa cccatttaga gccaagtctg
1081 aagaatcaga ggcaacttca tggttctcca aagaagagcc cgttactatc agtcctttcc
1141 cttctctgca gcctcttggt cataacaaaa gcagggcttc atcttcactt gatggcttta
1201 aggacagttt tgatctacag ggccagtcta cattaaaaat tagcaacccg aaaggatggg
1261 taaccttcga ggaagaagag gattttggtg tgaaagggaa gtcaaagtca gcttgttcag
1321 acttactggg taatcagcca agttcatttt ctggctccaa cctgacattg aatgatgact
1381 ggaataaagg tacaaatgtc tccttctgtg tgttgccgtc aagaagacct cctccacctc
1441 ctgtccctct gctcccgccc ggcaccagcc ctccagtaga tcctttcacg accttggcct
1501 ct
//