LOCUS HUMCA1V 5676 bp mRNA linear HUM 07-DEC-2007 DEFINITION Homo sapiens mRNA for collagen alpha 1(V) chain, complete cds. ACCESSION D90279 VERSION D90279.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 AUTHORS Takahara,K., Sato,Y., Okazawa,K., Okamoto,N., Noda,A., Yaoi,Y. and Kato,I. TITLE Complete primary structure of human collagen alpha1(V) chain JOURNAL J. Biol. Chem. 266, 13124-13129 (1991) COMMENT These data kindly submitted in computer readable form by: Kazuhiko Takahara Takara Shuzo Co., Ltd. Biotechnology Research Laboratories 3-4-1 Seta, Otsu Shiga 520-21 Japan FEATURES Location/Qualifiers source 1..5676 /db_xref="H-InvDB:HIT000102078" /db_xref="taxon:9606" /mol_type="mRNA" /organism="Homo sapiens" /tissue_type="placenta" CDS 127..5643 /codon_start=1 /product="collagen alpha 1(V) chain precursor" /protein_id="BAA14323.1" /translation="MDVHTRWKARSALRPGAPLLPPLLLLLLWAPPPSRAAQPADLLK VLDFHNLPDGITKTTGFCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSI LTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINL SDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDHPMIDINGIIVFGTRILDEEVFE GDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQDPNPDEYYTEGDGEGETYYYE YPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTEAAPMPETSEGAGKEEDVG IGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEIPTSTADTSNSSNPAPP PGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPANQDTIYEGIGGPRG EKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPG ADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGL TGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQT GPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGKPGPRG LLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGP PGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGAD GIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGP TGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKD GLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPG LAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGS PGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPA GPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRG QQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGA PGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGPSGRSGPPGPKGERGEKGESGPSGAA GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPG PTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGP DGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPP GEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTG PRGEAGHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEE IFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFK VYCNFTAGGSTCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVV QMTFLRLLSASAHQNVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRA LVDGCATKKGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG" sig_peptide 127..237 mat_peptide 238..5640 /product="collagen alpha 1(V) chain" BASE COUNT 1181 a 1803 c 1872 g 820 t ORIGIN 1 gtccccatga cctcctaaag tggtgcggtc cctgctgagt gcgctgcccg ggccgtgacc 61 cgcgcccctg tgcgtccccg cgcgcctccg agcgcccctg tgcgccccgg cccgcgcccc 121 gccggcatgg acgtccatac ccgctggaaa gcgcgcagcg cgctccgccc gggcgccccg 181 ctgctgcccc cgctgctgct gctgctgctg tgggcgccgc ctccgagccg cgcagctcag 241 ccagcagatc tcctgaaggt tctagatttt cacaacttgc ctgatggaat aacaaagaca 301 acaggctttt gcgccacgcg gcgatcttcc aaaggcccgg atgtcgctta cagagtcacc 361 aaagacgcgc agctcagcgc acccaccaag cagctgtacc ctgcgtctgc atttcccgag 421 gacttctcca tcctaacaac tgtgaaagcc aagaaaggca gccaggcctt cctggtctcc 481 atctacaacg agcagggtat ccagcagatt gggctggagc tgggccgctc tcccgtcttc 541 ctctacgagg accacacggg gaagcctggc ccggaagact accccctctt ccggggcatc 601 aacctgtcag atggcaagtg gcacagaatt gctctcagcg tccacaagaa aaatgtcacc 661 ttgatcctcg actgtaaaaa gaagaccacc aaattcctcg accgcagcga ccaccccatg 721 atcgacatca atggcatcat cgtgtttggc acccggatcc tggatgagga ggtgtttgag 781 ggtgacatcc agcagctgct ctttgtctcg gaccaccggg cagcttatga ttactgtgag 841 cactacagcc ctgactgtga caccgcagta cctgacaccc cacagtcgca ggaccccaat 901 ccagatgaat attacacgga aggagacggc gagggtgaga cctattacta cgaatacccc 961 tactacgaag accccgaaga cctagggaag gagcccaccc ccagcaagaa gcccgtggaa 1021 gctgccaaag aaaccacaga ggtccccgag gagctgaccc cgacccccac ggaagctgct 1081 cccatgcctg aaaccagtga aggggctggg aaggaagagg acgtcggcat cggggactat 1141 gactacgtgc ccagtgagga ctactacacg ccctcaccgt atgatgacct cacctatggc 1201 gagggggagg agaaccctga ccagcccaca gacccaggcg ctggggccga aattcccacc 1261 agcaccgccg acacctccaa ctcctccaat ccagctccgc ctccagggga aggtgcggat 1321 gacttggagg gggagttcac tgaggaaacg atccggaacc ttgacgagaa ctactacgac 1381 ccctactacg accccaccag ctccccgtcg gagatcgggc cgggaatgcc ggcgaaccag 1441 gataccatct atgaagggat tggaggacct cggggcgaga aaggccaaaa gggagaacca 1501 gcgattatcg agccgggcat gctcatcgag ggcccgcctg gcccagaagg ccccgcgggt 1561 cttcccggac ctccaggaac catgggtccc actggccaag tcggggaccc tggagaaagg 1621 ggcccccctg gacgcccagg ccttcctggg gccgatggcc tgcccggtcc tccaggaacc 1681 atgctcatgc tgcccttccg gtttggaggt ggcggcgatg cgggctccaa aggccccatg 1741 gtctcagccc aggagtccca ggcgcaagcc attctccagc aggccaggtt ggcactgagg 1801 ggaccagctg gcccgatggg tctcacaggg agacctggcc ctgtgggtcc ccctgggagc 1861 ggaggtttga agggcgagcc gggagacgtg gggcctcagg gtcctcgagg tgtgcaaggc 1921 ccgcctggtc cggccgggaa gcccggaaga cggggtcggg ctgggagtga tggagccaga 1981 ggaatgcctg gacaaactgg ccccaagggt gaccggggtt tcgacggcct ggctgggttg 2041 ccaggcgaga agggccacag gggtgaccct ggtccttccg gcccaccagg acctccggga 2101 gacgatggag aaaggggtga cgacggagaa gttgggccca gggggctgcc tgggaagccc 2161 gggccacgtg gtctgcttgg gccgaaaggg cccccaggtc ctcccggacc tcccggtgtc 2221 acgggtatgg acggccagcc ggggccaaaa ggaaatgtgg gtccccaggg agagcctggc 2281 cccccaggac agcagggtaa tccaggcgcc cagggtcttc caggccccca gggtgcaatt 2341 ggtcctccag gagaaaaggg tcccttgggg aaaccaggcc ttccaggaat gcccggtgct 2401 gacggacccc cgggacaccc tggcaaagaa ggccctccag gagagaaagg aggtcagggt 2461 ccacctggcc cccagggtcc gattggctac ccaggtcctc gaggagtcaa gggggccgat 2521 ggcatccgtg gtctgaaggg cacaaagggc gagaagggtg aagacggctt tcctgggttt 2581 aaaggagaca tgggcatcaa gggtgatcgg ggggagatcg gcccacccgg tcccagggga 2641 gaagatggcc ctgaaggccc aaagggtcgc ggaggtccca atggtgaccc cggtcctctg 2701 ggaccccctg gggagaaggg aaaactcgga gtcccagggt taccagggta tccaggaaga 2761 caaggaccaa agggctctat tggattccct ggatttcctg gcgccaatgg agagaagggc 2821 ggcaggggga cccctggaaa gccaggaccg cgggggcagc gaggcccaac gggtccgagg 2881 ggtgaaagag gcccccgggg catcactggg aagcctggcc ccaagggcaa ctccggaggt 2941 gacggcccag ctggccctcc tggtgaacgg ggacccaatg gaccccaagg acccacagga 3001 tttcctggac caaagggccc ccctggccct ccaggcaagg atggactccc aggacaccct 3061 ggacagagag gcgagactgg tttccaaggc aagaccggcc ctccaggccc ccccggcgtg 3121 gtcggccctc agggtcccac gggagaaacg ggcccaatgg gtgagcgtgg ccaccctggg 3181 ccccctggac cccccggtga acaggggctt ccgggccttg ctggaaaaga agggacgaag 3241 ggtgacccag gccctgcagg cctccctggg aaagatggcc ctccaggatt acgtggtttc 3301 cctggggacc gagggcttcc tggtccagtg ggagctcttg gactgaaagg caatgaaggg 3361 ccccctggcc caccaggccc tgcgggatct ccaggggaga gaggtccagc tggagccgct 3421 gggcccatcg gaattccagg gagacctggg ccccagggac ccccagggcc ggcaggagag 3481 aaaggggctc ctggcgagaa aggcccacaa ggcccagctg gccgagacgg tctccagggg 3541 cctgtggggc tcccgggtcc agctggccct gtgggtcccc ctggagaaga cggagataag 3601 ggagagatcg gggagccggg gcagaaagga agcaaggggg acaaaggaga acagggtcct 3661 cctgggccta caggtcctca aggccccatc ggacagccag gcccctctgg agctgacggc 3721 gagccggggc ctcggggcca gcagggcctt ttcgggcaga aaggtgatga aggtcccaga 3781 ggctttcctg gaccccctgg gccagtgggg ctgcagggtt tgccaggacc tccaggcgag 3841 aagggtgaga caggagacgt gggccagatg ggccccccgg gtccccctgg cccccgagga 3901 ccctccggag ctccaggtgc tgatggccca caaggtcccc caggtggaat aggaaaccct 3961 ggtgcagtgg gagagaaggg cgagcctggc gaagcaggtg agcctggccc ttccgggaga 4021 agcggccccc cgggacccaa aggagaaagg ggagagaagg gcgagtcagg cccttcaggt 4081 gctgccggac cccctggacc caaaggccct cccggagatg atggtcccaa aggcagccct 4141 ggcccagtgg gttttcctgg agatcctggc ccccccggag agcctggccc cgcgggtcaa 4201 gatggtcccc ctggtgacaa aggagatgat ggtgaacccg ggcagacggg atcccccggc 4261 cctactggtg aaccaggtcc atcggggcct ccaggaaaaa ggggtccccc aggccccgca 4321 ggccccgaag gcagacaggg agagaaaggg gccaagggag aagccggctt ggaaggccct 4381 cctgggaaga ctggccccat cggcccccag ggggcccctg ggaagcccgg accggatggc 4441 cttcgaggga tccctggccc tgtgggagaa caaggtctcc caggatcccc aggcccggac 4501 ggtccccccg gccccatggg tcccccagga cttcccggcc tcaaaggaga ttctggtccc 4561 aaaggtgaaa agggtcatcc aggcctgatc gggctcatcg gtcctccggg tgaacagggt 4621 gagaagggcg accgtggtct ccctggcccc cagggctcct ccggtcctaa gggagaacag 4681 ggtatcactg gtccttctgg cccgattggg cctcctgggc cccctggcct gccgggtccg 4741 cctggtccaa aaggtgctaa gggctcctcg ggtccaactg gcccgagggg tgaggcaggc 4801 cacccaggac ccccaggccc cccgggcccc ccgggagagg tcatccagcc cctgccaatc 4861 caggcatcca ggacgcggcg gaacatcgac gccagccagc tgctggacga cgggaatggc 4921 gagaactacg tggactacgc ggacggcatg gaagagatct tcggctctct caactctctg 4981 aagctggaga ttgagcagat gaaacggccc ctgggcacgc agcagaaccc cgcccgcacc 5041 tgcaaggacc tgcagctctg ccaccccgac ttcccagatg gtgaatactg ggtcgatcct 5101 aaccaaggat gctccaggga ttccttcaag gtttactgca acttcacagc cggggggtcg 5161 acatgcgtct tccctgacaa gaagtccgaa ggggccagaa tcacttcttg gcccaaagaa 5221 aacccgggct cctggttcag tgaattcaag cgtgggaaac tgctctccta tgtggacgcc 5281 gagggcaacc ctgtgggtgt ggtacagatg accttcctgc ggctgctgag cgcctctgcc 5341 caccagaacg tcacctacca ctgctaccag tcagtggcct ggcaggacgc agccacgggc 5401 agctacgaca aggccctccg cttcctgggc tccaacgacg aggagatgtc ctatgacaac 5461 aacccctaca tccgcgccct ggtggacggc tgtgctacca agaaaggcta ccagaagacg 5521 gttctggaga tcgacacccc caaagtggag caggtgccca tcgtggacat catgttcaat 5581 gacttcggtg aagcgtcaca gaaatttgga tttgaagtgg ggccggcttg cttcatgggc 5641 taggagccgc cgagcccggg ctcccgagcc gaattc //