LOCUS D89722 2439 bp mRNA linear HUM 20-FEB-1999
DEFINITION Homo sapiens bmal1a mRNA for BMAL1a, complete cds.
ACCESSION D89722
VERSION D89722.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2439)
AUTHORS Ikeda,M.
TITLE Direct Submission
JOURNAL Submitted (06-DEC-1996) to the DDBJ/EMBL/GenBank databases.
Contact:Masaaki Ikeda
Saitama Medical School, Department of Physiology; 38 Morohongo,
Iruma-gun, Saitama 350-04, Japan
REFERENCE 2
AUTHORS Ikeda,M. and Nomura,M.
TITLE Molecular Cloning of a Novel Basic Helix-Loop-Helix/PAS Factor
(BMAL1a) from the Human Brain
JOURNAL Unpublished (1997)
REFERENCE 3
AUTHORS Ikeda,M. and Nomura,M.
TITLE cDNA cloning and tissue-specific expression of a novel basic
helix-loop -helix/PAS protein (BMAL1) and identification of
alternatively spliced variants with alternative translation
initiation site usage
JOURNAL Biochem. Biophys. Res. Commun. 233, 258-264 (1997)
COMMENT Sequence updated (12-May-1997)
FEATURES Location/Qualifiers
source 1..2439
/db_xref="H-InvDB:HIT000102049"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
/sex="male"
/tissue_type="brain"
CDS 146..1897
/codon_start=1
/gene="bmal1a"
/product="BMAL1a"
/protein_id="BAA19968.1"
/transl_table=1
/translation="MINIESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDK
MNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDD
ELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAK
VKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVE
DKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGR
LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYF
HQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIV
STNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAG
KIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSS
GLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEA
DAGLGGPVDFSDLPWPL"
BASE COUNT 745 a 523 c 539 g 632 t
ORIGIN
1 gccccaccga cctgctttcc agctctcttg gtaccagtgg tgtggattgc aaccgcaaac
61 ggaaaggcag ctccactgac taccattcac aggtcgaatt tggggagcac aatggctgga
121 ggtcagatgc ccactaggag atgctatgat taatatagaa agcatggaca cagacaaaga
181 tgaccctcat ggaaggttag aatatacaga acaccaagga aggataaaaa atgcaaggga
241 agctcacagt cagattgaaa agcggcgtcg ggataaaatg aacagtttta tagatgaatt
301 ggcttctttg gtaccaacat gcaacgcaat gtccaggaaa ttagataaac ttactgtgct
361 aaggatggct gttcagcaca tgaaaacatt aagaggtgcc accaatccat acacagaagc
421 aaactacaaa ccaacttttc tatcagacga tgaattgaaa cacctcattc tcagggcagc
481 agatggattt ttgtttgtcg taggatgtga ccgagggaag atactctttg tctcagagtc
541 tgtcttcaag atcctcaact acagccagaa tgatctgatt ggtcagagtt tgtttgacta
601 cctgcatcct aaagatattg ccaaagtcaa ggagcagctc tcctcctctg acaccgcacc
661 ccgggagcgg ctcatagatg caaaaactgg acttccagtt aaaacagata taacccctgg
721 gccatctcga ttatgttctg gagcacgacg ttctttcttc tgtaggatga agtgtaacag
781 gccttcagta aaggttgaag acaaggactt cccctctacc tgctcaaaga aaaaagcaga
841 tcgaaaaagc ttctgcacaa tccacagcac aggctatttg aaaagctggc cacccacaaa
901 gatggggctg gatgaagaca acgaaccaga caatgagggg tgtaacctca gctgcctcgt
961 cgcaattgga cgactgcatt ctcatgtagt tccacaacca gtgaacgggg aaatcagggt
1021 gaaatctatg gaatatgttt ctcggcacgc gatagatggc aagtttgttt ttgtagacca
1081 gagggcaaca gctattttgg catatttacc acaagaactt ctaggcacat cgtgttatga
1141 atattttcac caagatgaca taggacatct tgcagaatgt cataggcaag ttttacagac
1201 gagagaaaaa attacaacta attgctataa atttaaaatc aaagatggtt cttttatcac
1261 actacggagt cgatggttca gtttcatgaa cccttggacc aaggaagtag aatatattgt
1321 ctcaactaac actgttgttt tagccaacgt cctggaaggc ggggacccaa ccttcccaca
1381 gctcacagca tccccccaca gcatggacag catgctgccc tctggagaag gtggcccaaa
1441 gaggacccac cccactgttc cagggattcc agggggaacc cgggctgggg caggaaaaat
1501 aggccgaatg attgctgagg aaatcatgga aatccacagg ataagagggt catcgccttc
1561 tagctgtggc tccagcccat tgaacatcac gagtacgcct ccccctgatg cctcttctcc
1621 aggaggcaag aagattttaa atggagggac tccagacatt ccttccagtg gcctactatc
1681 aggccaggct caggagaacc caggttatcc atattctgat agttcttcta ttcttggtga
1741 gaacccccac ataggtatag acatgattga caacgaccaa ggatcaagta gtcccagtaa
1801 tgatgaggca gcaatggctg tcatcatgag cctcttggaa gcagatgctg gactgggtgg
1861 ccctgttgac tttagtgact tgccatggcc gctgtaaaca ctacatgttg ctttggcaac
1921 agctatagta tcaaagtgca ttactggtgg agttttacag tctgtgaagc ttactggata
1981 aggagagaat agcttttatg tactgacttc ataaaagcca tctcagagcc attgatacaa
2041 gtcaatctta ctatatgtaa cttcagacaa agtggaacta agcctgctcc agtgtttcct
2101 catcattgat tattgggcca gctgtggata gcttgcatta attgtatatt ttggattctg
2161 tttgtgttga attttttaat cattgtgcac agaagcatca ttggtagctt ttatatgcaa
2221 atggtcattt cagatgtatg gtgtttttac actacaaaga agtcccccat gtggatattt
2281 cttatactaa ttgtatcata aagccgttta ttcttccttg taagaatcct ttactataaa
2341 tatgggttaa agtataatgt actagacagt taaatatttt taataaatgt ttcccttgtt
2401 ctattaaaaa aaaaaaaaaa aaaaaaaaaa aaaaacggc
//