LOCUS D89057 1259 bp DNA linear PLN 28-APR-2001
DEFINITION Panax ginseng chloroplast DNA for maturase, partial cds.
ACCESSION D89057
VERSION D89057.1
KEYWORDS .
SOURCE chloroplast Panax ginseng
ORGANISM Panax ginseng
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax.
REFERENCE 1 (bases 1 to 1259)
AUTHORS Komatsu,K.
TITLE Direct Submission
JOURNAL Submitted (14-NOV-1996) to the DDBJ/EMBL/GenBank databases.
Contact:Katsuko Komatsu
Toyama Medical and Pharmaceutical University, Research Institute
for Wakan-Yaku; Sugitani 2630, Toyama, Toyama 930-0194, Japan
REFERENCE 2
AUTHORS Fushimi,H., Komatsu,K., Isobe,M. and Namba,T.
TITLE Application of PCR-RFLP and MASA analyses on 18S ribosomal RNA
gene sequence for the identification of three ginseng drugs
JOURNAL Biol. Pharm. Bull. 20, 765-769 (1997)
COMMENT
FEATURES Location/Qualifiers
source 1..1259
/db_xref="taxon:4054"
/mol_type="genomic DNA"
/note="ds PCR product"
/organelle="plastid:chloroplast"
/organism="Panax ginseng"
/tissue_type="root"
exon 1..1259
/note="located within the intron of the transfer RNA gene
for lysine (trnK)"
CDS <1..>1259
/codon_start=1
/gene="matK"
/product="maturase"
/protein_id="BAA23621.1"
/transl_table=11
/translation="LYPLIFQEYIYALAHDHGLNINRSILLENAGYDNKFSLLIVKRL
IARMYQQNHLILSTNDSNQNRFLRRNKNLYSQMISEGFAVIVEIPFYLQLKSSLESKG
IVKSHNLRSIHSIFPFLEDKISHLIYGLEILIPYPVHLEILVQTLRYWVKDASSLHLL
RFFLHEYCNWNTPNKAGSSFSKRNQRLFFLLYNSHLCEYESIFIFLRNQSSHLRSTSS
GTLLERIYFYGKIKYLVKVFVKAFQVNLLLLKDPFMHYVRYQGKSILASKGTPFLMKK
WTYYFVNLWQCHFYLWSQPGRICINQLYNHSLDILGYLSSARLNPSMVRGQMLENSFL
IDNAINKFDAIVPIIPLIGSLAKAKFCNVLGHPISKAVWTDLSDSDIIDQFGRICRNL
SHYHSGSSQKKSLYRIKYILRLSCART"
primer_bind 1..25
/note="PCR primer"
primer_bind 1236..1259
/note="PCR primer"
BASE COUNT 386 a 224 c 196 g 453 t
ORIGIN
1 ctatatccac ttatctttca ggagtatatt tatgcacttg ctcatgatca tggtttaaat
61 ataaatagat ccattttgtt ggaaaatgcg ggttatgaca ataaattcag tttactaatt
121 gtgaaacgtt taattgctcg aatgtatcaa cagaatcatt tgattctttc tactaatgat
181 tctaaccaaa atagattttt gaggcgcaac aagaatttgt attctcaaat gatatcagag
241 gggtttgcag tcattgtgga aattccattt tatctacaat taaaatcttc cctagaaagc
301 aaagggatag tcaaatctca taatttacga tcaattcatt caatatttcc ttttttagag
361 gacaaaattt cacatttaat ttatggttta gagatactaa taccctaccc agtccatctg
421 gaaatcttgg ttcaaactct tcgctactgg gtaaaagatg cttcttcttt gcatttatta
481 cgattctttc tccacgagta ttgtaattgg aatactccaa ataaagccgg ttcttctttt
541 tcaaaaagaa atcaaagact attcttctta ctatataatt ctcatctatg tgaatacgaa
601 tccatcttca tctttctccg taaccaatct tctcatttac gctcaacatc ttctggaacc
661 cttcttgaac gaatctattt ctatggaaaa ataaaatatc ttgtaaaagt ctttgttaag
721 gcttttcaag tcaatctatt gttgttgaag gatcctttca tgcattatgt taggtatcaa
781 ggaaaatcaa ttctcgcttc aaaagggacg ccctttttga tgaaaaaatg gacatattac
841 tttgttaatt tatggcaatg tcatttttac ctgtggtctc aaccgggaag gatctgtata
901 aaccaattat acaatcattc cctcgacatt ctgggctatc tatcaagtgc gcggctaaac
961 ccttcaatgg tacgcggtca aatgctagaa aattcatttc taattgataa tgctattaat
1021 aagttcgatg ctattgttcc aattattcct ctgattggat cattggctaa agcgaaattt
1081 tgtaacgtat tggggcatcc tattagtaag gcggtttgga ccgatttatc agattctgat
1141 attattgacc aatttgggcg tatatgcaga aatctttctc attatcatag tggatcctca
1201 caaaaaaaga gtttgtatcg aataaagtat atacttcgac tttcttgtgc tagaacttt
//