LOCUS D88010 3270 bp DNA linear HUM 07-NOV-2007
DEFINITION Homo sapiens DNA for ribosomal protein S13, complete cds, U14
small nucleolar RNA, complete sequence.
ACCESSION D88010 D88011-D88012
VERSION D88010.1
KEYWORDS U14 small nuclear RNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3270)
AUTHORS Kenmochi,N.
TITLE Direct Submission
JOURNAL Submitted (25-SEP-1996) to the DDBJ/EMBL/GenBank databases.
Contact:Naoya Kenmochi
Miyazaki Medical College, Central Research Laboratories; 5200
Kihara, Kiyotake, Miyazaki 889-1692, Japan
REFERENCE 2
AUTHORS Kenmochi,N., Higa,S., Yoshihama,M. and Tanaka,T.
TITLE U14 snoRNAs are encoded in introns of human ribosomal protein S13
gene
JOURNAL Biochem. Biophys. Res. Commun. 228, 371-374 (1996)
COMMENT
FEATURES Location/Qualifiers
source 1..3270
/db_xref="taxon:9606"
/mol_type="genomic DNA"
/organism="Homo sapiens"
exon <1..48
CDS join(26..48,190..238,421..499,2040..2209,2466..2566,
3196..3229)
/codon_start=1
/product="ribosomal protein S13"
/protein_id="BAA13528.1"
/transl_table=1
/translation="MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKG
LTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHL
ERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA"
intron 49..189
exon 190..238
intron 239..420
exon 421..499
intron 500..2039
repeat_region 1200..1490
ncRNA 1795..1885
/ncRNA_class="snoRNA"
/note="snoRNA, U14-S13-3"
/product="U14 small nucleolar RNA"
exon 2040..2209
intron 2210..2465
exon 2466..2566
intron 2567..3195
ncRNA 2919..3010
/ncRNA_class="snoRNA"
/note="sno RNA, U14-S13-5"
/product="U14 small nucleolar RNA"
exon 3196..3270
regulatory 3250..3255
/regulatory_class="polyA_signal_sequence"
BASE COUNT 800 a 714 c 787 g 964 t
ORIGIN
1 ctttcgttgc ctgatcgccg ccatcatggg tcgcatgcat gctcccgggt gagctcgggg
61 catcaagccg gattgctggg cggggggtgg gaggaagaca gggagtgtgg gcagcgggcc
121 gaggggatga tgttctgggc tgctctggca ctagccgcca cctcacctcg agactgcttc
181 tctccccagg aagggcctgt cccagtcggc tttaccctat cgacgcagcg tccccactgt
241 aagtagcgcg ctgggaccgg ggagaatccg gggagggggt tggcatttgt ctcgggtgaa
301 gcgacgccag ggtgaggaac ttgcgtgtat gaggagcgcg gttttgcgga aggagagacc
361 gctgttctgc ggcgccattc ctgggttctc atcctaaggc tgctttctat tccataacag
421 tggttgaagt tgacatctga cgacgtgaag gagcagattt acaaactggc caagaagggc
481 cttactcctt cacagatcgg tgagtgtttg tgtctaacat agcctatttc gcctgtcctc
541 gtgtgacttg taggatctag taggtggtaa agttatttta aaaatagcca aaactctggt
601 ctcgccaccg tgctagaggc atcattgtaa gcacttcaca tgtactgatt tcgtttaatt
661 ctgaccacaa tactttgaaa taaatcttca tggctttcac cccagtttac agttgaggaa
721 gcagaggcac actgccgctg gatactaacc agccccaaat cacacagctg tcaagtggag
781 gagttggaat tggctaagca gagtgcctga cacagttcct cacagttagg tgtggtttga
841 atctcagctg cgtgtgactt cgtgcaagtg gcttcattca gcaaatgttt accttctatg
901 tgctgaacat ggttctgggg cctgagaaca tactactctc cgactcccct gcccaaaaaa
961 gccagccgca atgtgcctgt agtctcagat acttgggatg cagaggtgag aggatcacca
1021 gagcctagaa gtcccaggct gcagtgagct atgatgaagc cactgcactc ctgggtgaca
1081 gagagacccc acctcttttt tttttttgag acagtcttgc tcttgtcgcc cagtctggag
1141 tgcagtggcg cgatctcagc tcactgcaac ctccacctcc tggatttcaa gcgattctcc
1201 tgcctcagcc tcccgaatag gtgggattac aggcgcccgc cagcaggccc agctaatttg
1261 tgtgtttttg tttgagaccg attctcactt tgtcacctag gctggagtgc agtggtatga
1321 tctcggctca ctgcaacctc cgcttcctgg gttcaagcaa gcaattctcc tgcctctgcc
1381 tctggagtag ctgagactac aggccgcacc accacgcccg gctaattttt gtatttttag
1441 tagagacgag gtttcaccat gttggccagg ctggtctcag actcctgacc tcagatgatc
1501 cactgcctcg gcctaccaaa gtgctgggat tacaggcgtg agaccaccac ctgatcccac
1561 ctcttaaaag gggnaggggg ntcgcnnaaa aanctgtaca ccggagcttg gagtctaatt
1621 ggaggtatga cacatcaaaa gaaaatatgt catagattgt aagtagacag agctcattag
1681 aggtttaaaa gaaataacgt gtaaagtttt tagaagaata tctgaccaga gttctcagta
1741 aatgttagct gtggaatctc attaatccct ttggtcatct gtattccagc aagctcactg
1801 tgatgatggt tttccaacat tcgcagtttc caccagaaag gttttcctta gtgttgggta
1861 aaccttcctt ggatgtctga gtgagcttta tgtgcattct cacgttggtt tctgtgatgt
1921 ataaaagtat acccccatct tacagatagg aaactatgcc ctgatttctg agccttgaca
1981 tcatcacatt ctccagtttg tgtttcgtgt tgaaagttaa aacgtgattc ccttttcagg
2041 tgtaatcctg agagattcac atggtgttgc acaagtacgt tttgtgacag gcaataaaat
2101 tttaagaatt cttaagtcta agggacttgc tcctgacctt cctgaagatc tctaccattt
2161 aattaagaaa gcagttgctg ttcgaaagca tcttgagagg aacagaaagg taagctaata
2221 aataaaacct ggtgctaagt aggactgctt gtactaaatt ttttcggtaa aatgtaatgc
2281 atctggtttg aattatccaa ggcttagtac acaaaccagt gtagtgctgc tttgaagttc
2341 aaattctatc caaagagatt ttcattatag aaagtgcatg gtagctctac attctcttat
2401 taatgtttga taatgttagg tcattttggg tggttttctt gaattgcacc aaattttatt
2461 tttaggataa ggatgctaaa ttccgtctga ttctaataga gagccggatt caccgtttgg
2521 ctcgatatta taagaccaag cgagtcctcc ctcccaattg gaaatagtaa gtatcaactc
2581 ttttgtcgtt gttatcaaga ataggagtca gccagtagta aaagtcctag tagtaaatat
2641 gttcagcctt gggggctagt agtaaatatg ttcagccttg ggggctattt tgttaactgc
2701 tctttgagct ctggcctggt agtgggaaag cagccacagg caatacataa tcgaatgggt
2761 gtggctgctt gtctttaata aagacaagca gagggccata gttgcagacc ccagatttag
2821 accatgaata agccctttga ctctctttta gatagtaggt agattttcct ttcatacctc
2881 tactcccagg agtttgaatt aattttcaca tgaattgctc actatgatga ttggttgcca
2941 gacattcgca gtttccacca gaaatgtttt tccttatgtt ggccagttct tccttggatg
3001 tctgagtgag catcttcatt cattgtgctt gaacacaatg agttggttca ggtattcagt
3061 agtttggtgc actttatata gtttggattt attaactgtt tgagaatagc accattagtg
3121 gggagattct gttaatgaat gtggagggac cagtattaat cctgattttc tttctttccc
3181 cttttgcttt tccagtgaat catctacagc ctctgccctg gtcgcataaa tttgtctgtg
3241 tactcaagca ataaaatgat tgtttaacgt
//