LOCUS CR933722 4021 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686H2039 (from clone DKFZp686H2039).
ACCESSION CR933722
VERSION CR933722.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4021)
AUTHORS Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Medigenomix (Martinsried/Germany) within the cDNA
sequencing
consortium of the German Genome Project.
This clone (DKFZp686H2039) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686H2039
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4021
/db_xref="H-InvDB:HIT000306876"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686H2039"
/tissue_type="testis"
/note="CLASP1, N-terminus truncated, differentially
spliced"
/db_xref="taxon:9606"
CDS <3..3827
/codon_start=1
/gene="DKFZp686H2039"
/product="hypothetical protein"
/db_xref="GOA:Q7Z460"
/db_xref="H-InvDB:HIT000306876.13"
/db_xref="HGNC:HGNC:17088"
/db_xref="InterPro:IPR011989"
/db_xref="InterPro:IPR016024"
/db_xref="InterPro:IPR021133"
/db_xref="InterPro:IPR024395"
/db_xref="InterPro:IPR028399"
/db_xref="InterPro:IPR034085"
/db_xref="PDB:4K92"
/db_xref="PDB:6MQ5"
/db_xref="PDB:6MQ7"
/db_xref="UniProtKB/Swiss-Prot:Q7Z460"
/protein_id="CAI46251.1"
/translation="TKFDEVQKSGNMIQSANDKNFDDEDSVDGNGPSSASSTSSKAPP
SSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEEDFIKAFDDVPVVQIYSSRDLEE
SINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDL
RSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIR
HTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIH
DADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDR
SFSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKS
KVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQ
SQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSR
ETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRR
RYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSER
KEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKIADSEAECEDKEGNLFPSE
VSCTRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDV
TRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLA
VSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL
KNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEI
YSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEG
GRTALDNKTSLLNTQPPRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLR
DVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLL
ETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEA
ASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPG
LLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNS
NSSSSSDVSTHS"
BASE COUNT 1164 a 955 c 953 g 949 t
ORIGIN
1 ttacaaaatt tgatgaagtc cagaaatctg gaaacatgat acaatctgca aatgataaaa
61 atttcgacga tgaagattct gtggatggta acggaccttc ctctgctagt tctacatcat
121 ccaaggctcc accaagttct cggagaaacg ttggaatggg aaccacccgc cggcttggtt
181 catccaccct tggatccaag tcttcagctg caaaagaagg agctggtgct gttgatgaag
241 aggattttat taaagcattt gatgatgtac ctgtagtaca gatttattcc agccgagacc
301 ttgaggaatc cataaacaaa attagggaaa tattatctga tgacaagcat gattgggagc
361 agagagtaaa tgctctaaaa aagattagat ctttactttt ggctggtgct gctgagtatg
421 ataacttctt tcaacatttg cgtcttttgg atggagcctt taaactctct gctaaggacc
481 tgcggtctca ggtagtgcgg gaggcttgta tcacgttggg gcatctgtca tcagttctgg
541 ggaataagtt tgaccatgga gctgaagcca ttatgccaac tatctttaat ttaattccaa
601 acagtgccaa aattatggcc acatctggtg ttgtagctgt taggttaatt attcggcaca
661 cacacatccc taggttaata cctgtcataa caagcaactg tacctctaag tctgtcgcag
721 ttagaaggcg ctgttttgaa tttttagatt tgcttttaca agaatggcag acacattcac
781 tagaacgaca catatcagta ttagctgaaa caataaagaa gggaatacat gatgctgatt
841 ccgaagcaag aatagaagcc agaaaatgtt actggggttt ccacagtcac ttcagcagag
901 aagcagagca cttgtaccac accttggagt cctcctacca gaaagccctg cagtcccacc
961 tgaagaactc agacagcata gtgtctctgc ctcagtcaga ccgctcattt tccagctctc
1021 aagagagtct aaatcgtccg ctgtctgcca aaagaagtcc tactggaagt accacatcta
1081 gagcttctac agttagtacc aaatctgtgt caacgactgg gtccctccag cgatctcgaa
1141 gtgatattga tgtgaacgca gcagccagtg ccaaatccaa agtctcctca tcttcgggca
1201 cgacgccttt cagctctgca gcagctttgc ctccagggtc atacgcatcc ttaggtcgga
1261 tccgcacaag acggcaaagc tctgggagtg ccaccaacgt cgcctctaca cctgataacc
1321 ggggccgcag tcgcgctaaa gtggtttcac agtcccagcg atccagatct gctaatcctg
1381 ctggtgctgg cagccggtca agttccccag gaaaattgtt gggaagtggt tatggtggac
1441 ttactggggg ctcctcacga ggcccacctg tgacaccgtc ttcagaaaag cgaagcaaga
1501 ttcccaggag ccagggatgt agccgggaaa caagtccaaa ccgaatagga ttagatcggt
1561 ttgggcttgg ccagccagga agaatacctg gttctgtgaa tgccatgaga gttctgagca
1621 caagtacaga tcttgaagct gctgttgctg atgctttgct gttaggagac tccaggagca
1681 agaagaagcc tgtgaggagg agatatgagc cgtatgggat gtattctgac gatgatgcca
1741 acagtgatgc ctcaagtgtt tgctctgagc gctcatatgg ctccaggaat ggtggcattc
1801 cccattatct gcggcagact gaggatgtag cagaagttct caaccactgt gctagttcaa
1861 actggtcaga aaggaaagaa gggcttctgg gcctgcagaa cttactgaag agccaaagaa
1921 cactgagtcg agttgaactg aaaaggttgt gtgagatctt cactcggatg tttgctgacc
1981 ctcatagcaa gattgctgat tcagaagcag aatgtgagga taaagaagga aatttgtttc
2041 catcagaagt ctcttgtaca agagttttca gtatgttttt ggagactctt gtggatttta
2101 taataattca taaggatgat ttacaagact ggctttttgt tcttctcaca caattactta
2161 agaaaatggg agcagattta cttggatctg tgcaagcaaa agttcaaaag gctctagatg
2221 tcacaaggga ctcctttcca tttgatcaac aatttaacat tttgatgaga tttattgtgg
2281 atcaaactca aactccaaac ctcaaggtca aagttgcaat cctgaaatac attgagtctc
2341 tggccagaca gatggatcca acagattttg taaactctag tgagacaagg cttgctgttt
2401 ctagaatcat aacctggaca acagaaccaa agagttcaga cgtgagaaag gcagcacaga
2461 ttgtgctaat ctctctgttt gaattgaata ctcctgaatt taccatgtta cttggtgcct
2521 tgccaaaaac attccaggat ggtgccacca aactcctgca caaccacctc aagaattcca
2581 gtaacaccag tgtgggctct ccaagcaata cgattggccg gacgccctcc cgacacacca
2641 gcagcaggac cagccccctg acctcaccca ccaactgttc ccatgggggt ctgtctccaa
2701 gcatgctgga ctatgataca gagaacctga actctgaaga aatctatagt tctctacgtg
2761 gagttacaga agccattgaa aagtttagtt ttcgaagcca agaagatctg aatgagccaa
2821 ttaaacgaga tggcaaaaag gagtgtgata ttgtgtcccg cgatgggggc gctgcctccc
2881 ctgccactga gggccggggg ggtagtgaag tagaaggagg ccggacagct ctggataaca
2941 agacctcact actcaacacc cagcctccgc gcgccttccc ggggccgcgg gcgcgagact
3001 acaacccgta cccctactca gatgccatca acacctacga caagaccgcc ctgaaagagg
3061 ctgtgttcga tgacgacatg gagcagcttc gagacgtgcc catcgaccat tctgacctgg
3121 tggctgacct tctgaaagag ctgtccaacc acaatgagcg agtggaggaa cggaagggag
3181 ccctgctgga gctgctcaag atcacgcggg aagacagcct tggtgtctgg gaggagcact
3241 tcaagaccat tctgctcctg ctgctggaga cccttggaga caaagaccat tcaattcgag
3301 cactggcgtt aagagttttg agggaaattc tgagaaatca accagcaaga tttaaaaact
3361 acgccgagct gacgattatg aagactctgg aagcccacaa agactcccat aaggaggtgg
3421 tgagagcggc tgaggaggct gcgtccacac tggccagttc catccacccg gagcagtgca
3481 tcaaggtgct ctgccccatc atccagacgg ccgactaccc catcaacctt gctgccatca
3541 agatgcagac caaagtcgtc gagaggatcg caaaggagtc attgctgcag ctccttgtcg
3601 acatcatccc aggcttgctg cagggttatg acaacaccga aagtagtgtg cgtaaggcca
3661 gcgtgttttg cttagtggca atttattccg taatcggaga agacctgaaa cctcaccttg
3721 cacagctcac agggagcaag atgaagctac taaacttata cataaagagg gcccagacca
3781 ccaacagcaa cagcagctcc tcctccgatg tctccacgca cagctaatgg cagtacctgt
3841 ctcttgtgta gacctagaag caatcggtgg tgcctctcag agacctttcc ccaccccctt
3901 catcggctgc ccagtcagta caaggaggcc cacaaatatt tattacaatc agtattttgg
3961 tcccttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4021 a
//