LOCUS CR933669 4523 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp781O2274 (from clone DKFZp781O2274).
ACCESSION CR933669
VERSION CR933669.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4523)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp781O2274) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp781O2274
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4523
/db_xref="H-InvDB:HIT000306850"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="781 (synonym: hlcc4). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp781O2274"
/tissue_type="seminom"
/note="transmembrane channel-like protein 7, alternative
start, differentially spliced"
/db_xref="taxon:9606"
CDS join(559..1905,1905..2399)
/codon_start=1
/gene="DKFZp781O2274"
/product="hypothetical protein"
/db_xref="GOA:Q7Z402"
/db_xref="H-InvDB:HIT000306850.14"
/db_xref="HGNC:HGNC:23000"
/db_xref="InterPro:IPR012496"
/db_xref="InterPro:IPR038900"
/db_xref="UniProtKB/Swiss-Prot:Q7Z402"
/protein_id="CAI45966.1"
/translation="MKYLSEWDQWKRYSSKSWKRFLEKAREMTTHLELWREDIRSIEG
KFGTGIQSYFSFLRFLVLLNLVIFLIIFMLVLLPVLLTKYKITNSSFVLIPFKDMDKQ
CTVYPVSSSGLIYFYSYIIDLLSGTGFLEETSLFYGHYTIDEVKFQNFTYDLPLAYLL
STIASLALSLLWIVKRSVEGFKINLIRSEEHFQSYCNKIFAGWDFCITNRSMADLKHS
SLRYELRADLEEERMRQKIAERTSEETIRIYSLRLFLNCIVLAVLGACFYAIYVATVF
SQEHMKKEIDKMVFGENLFILYLPSIVITLANFITPMIFAKIIRYEDYSPGFEIRLTI
LRCVFMRLATICVLVFTLGSKITSCDDDTCDLCGYNQKLYPCWETQVGQEMYKLMIFD
FIIILAVTLFVDFPRKLLVTYCSSCKLIQCWGQQEFAIPDNVLGIVYGQTICWIGAFF
SPLLPAIATLKFIIIFYVKEWSLLYTCRPSPRPFRASNSNFFFLLVLLIGLCLAIIPL
TISISRIPSSKACGPFTNFNTTWEVIPKTVSTFPSSLQSFIHGVTSEAFAVPFFMIIC
LIMFYFIALAGAHKRVVIQLREQLSLESRDKCYLIQKLTEAQRDMRN"
BASE COUNT 1224 a 1034 c 980 g 1285 t
ORIGIN
1 ttccttattc ctgctccctc cacaaacgcg tcctcatcca atccagtgga acccagccgg
61 gccaaaagga cacgagaact gcagtctgga ccgtggtggg tttgtcttcc agctgttgac
121 cgagacagtc tttcaatagc ctcatctgct gttaaatgaa aggatttgag caccccctcc
181 acgcctaaca ttctggtatg aggtgcctgc ctcccggaca tttcagcctt cacatacagt
241 tagaccaact tgaaaccgaa ttctgccttg tctgtttatt gctgtgggac ctttgagaac
301 ctctctctag actccagttg cttctcttct ccacctgtga acttcctcca agaattgcca
361 agctaccggt ccattgcacg taggagaacg actgtccatt cccgggacaa gcaaagcgga
421 actttgctaa agccaaccga ctcttacagc tcccagctgg aggacagaat cgctgaaaac
481 ctcagcagcc attctcttcg aaattatgca ctgaacatct ctgagaagcg gagactaagg
541 gacattcaag agacacaaat gaagtatctc tccgaatggg accagtggaa gcggtatagc
601 agcaagtctt ggaagaggtt cctagagaag gctcgagaga tgacgaccca cctggagctg
661 tggcgggagg acatccgcag catagaaggg aaatttggca ctgggattca gtcctatttc
721 tccttcttga gattcctggt gttgctgaat ttggtgatat ttctgatcat ctttatgctg
781 gttttgctcc cagtcttact cacgaaatac aagatcacca acagcagctt cgtgctcatt
841 cctttcaaag acatggataa acaatgtaca gtctatccag taagcagttc tggactcatt
901 tacttttaca gttatatcat agacttgctt tctggcactg gtttcctgga ggaaactagc
961 ctcttttacg gacattacac cattgatgag gtgaaatttc agaacttcac ctatgatctg
1021 cccctggcgt atttgttaag cacaatcgcc tccctggccc tgagccttct ttggatagtg
1081 aaaaggtcgg tggaaggatt caaaatcaac ctgattcgga gtgaggagca ctttcagagt
1141 tactgcaaca agatatttgc cggctgggac ttctgcatca ctaaccgcag catggcggat
1201 ctgaagcaca gcagcttgcg gtacgagctc cgagcagatc tggaggaaga aagaatgcgg
1261 cagaaaatag cagaaaggac ctcagaagaa acaatacgca tttactcttt gagactgttt
1321 ttgaactgta ttgttctggc tgttttaggg gcatgctttt atgcaatata cgtagcaact
1381 gtcttctcgc aagagcacat gaaaaaggaa atcgacaaga tggtttttgg agagaacctc
1441 ttcatattgt atctaccgtc tattgtgatc acgctggcca attttatcac cccaatgatc
1501 tttgccaaga tcatccgcta tgaggattat tctccaggct ttgagatccg tctgacaatc
1561 cttaggtgtg tctttatgcg gctggccacc atatgtgtcc tggtgttcac gctgggctcc
1621 aagatcacat cctgtgatga tgacacatgt gacctttgcg gctacaacca gaaactctac
1681 ccgtgctggg agacccaagt tgggcaggaa atgtacaagc tgatgatctt cgacttcatc
1741 atcatcttgg ctgtgacact cttcgtggat tttcctagaa agctcctggt gacctactgt
1801 tcctcttgca agctgattca gtgctggggg cagcaggagt ttgccattcc tgataacgtc
1861 ctggggatag tttacgggca aaccatctgc tggatcggag ccttttctca ccccttctcc
1921 ctgcaattgc aaccctgaaa ttcattatca tcttctatgt gaaagagtgg agtctgcttt
1981 acacctgcag accctccccc aggccgttca gagcatccaa ttctaatttc ttcttcctgt
2041 tggtgttgtt gatcgggctg tgtttggcaa taatacctct gacaatcagc atatcacgca
2101 tcccttcctc gaaagcctgt gggccgttca ccaacttcaa caccacctgg gaggtcatcc
2161 ccaagacagt gagcaccttc cccagctcgc tgcagtcctt catccatggt gtcacatccg
2221 aagcctttgc agttcctttc ttcatgatta tttgcctcat catgttttac ttcattgcct
2281 tagctggagc acacaaacgg gtggtcatcc agctccgaga gcagctatcc ctggaaagtc
2341 gtgacaagtg ctacctaatc cagaaactaa cagaagccca aagggacatg aggaactaac
2401 tagactgagc gtgaagatgg tgctgcctgt tgcttctaag ctgacctagt gattctgctg
2461 agcctacaga gtctacctgg gttttgagtg gacatttaaa aatatatttt tcttgagttt
2521 aggcttttcc atatgtgcag ctgtgtttac ctaacccagc ccttaattag ggcttcagtg
2581 acttagaaaa gcaggggaaa cccaaggctt tgcctgcaga ccggccactc tgtgacaact
2641 ctaccaaaaa ccaacaagcc attcaagctt ttacaagaat gaaagagcgg agacggtagt
2701 ttagtatttg agccacgagt ttatgtgcac aagtgttttg ggttgtggac tgaagctcag
2761 cctgttaatc agaccagccc atgagtgtat aacaaacaga attggaggct ggtttcttaa
2821 acacacacgt ccacattttt tagggttgtt ttcctgtgct tacaattttt aatgcatgtg
2881 cctttatttc acaaaacatg tggctgggcg cagcggctca cgcctgttat cccaacactt
2941 tgggaggccg aggcaggcgg agcacctaag ttggggagtt caagaccagc ctgaccaacg
3001 tggagaaact ccgtctccac taaaatacaa aattagctgg gtgtggtggc acatgcctgt
3061 aatatcagct actcaggagg ctgaggcagg agaattgctt gaacccagga ggtggagttt
3121 gcagtgagct gagatcacac cattgcactc cagcccgggc aaaaagagca aaactctccc
3181 taaaaaaaaa atgtagaata tctcttaaga tttccgttat ggtaaaaacc atatgcaata
3241 aatacctcat tgtaagctta cccaaaattg atagatgtca accttttaac agaagaacag
3301 aagtttaagt tattgtttaa tgtaatcagt tttcatttta atatctttga aatctttttc
3361 aaaggactgt agttttgtaa tggacttttc aagccttcct tccattgttt ttcttccgtt
3421 cactggctcc acacgtttcc tggggagtag cctggaattt aaagttgggt gcaggtttta
3481 gaaagctgtt gctgttaaca ataattctcc cggccatctc cactccacta ctcaaaaatg
3541 cctgaatcct tgctcagagg agcaaaggta tcttctcgtc cctttcttac agccattttc
3601 ttgcttttcc acaaagatat tatttaaagt ggaatatttt tgtaactggg ataccaatga
3661 gcttttcggt cttttcctga cttggtaagg tttatgggtt tctaaatcta ataactacag
3721 tcataccacc ctgaaaatgc ctgatctcgt ctaaatctaa taactggtgt catggaattt
3781 tgagtaacca aagattcatt ccagtctcac ttaaaaaaat aaattctgct gggcacagtg
3841 gctcatgcct gcaatcccag aactttggga gtccaaggag ggcagatcac ctgaagtcag
3901 aagtttgaga ccagcctggt caatgtggca agaccccgtc tctactaaaa gtacaaaaat
3961 tagccaggca tggtggcgtg tgcctgtaat cccagctact tgggaggctg aggcatgaga
4021 atcacttgaa cctgggaggt gaaggctgca gtgtgcgaga ccgtgccact gtactccagc
4081 ctaggtgaca gagggagacc ctatctcaaa aaaaaagata ggtgaaaaga aaaaaaaagt
4141 tgtaattgta aacatttctg cccagtgcct ttatatttat ataacatttt cactgtgacc
4201 agacttgatg atattcaagt tttctatttg tgtgtgtgtg tgtgtgtgtg tgtgatgaac
4261 acaacgaaaa cgtactgcgt tttttttcct attataaaag tgatactgaa atatgctaat
4321 taatatatta attttagtta aatgctgcta atatgcatac ctcttacttg aaggttttta
4381 atatgttttg ataactttaa taacttcagg tgatgtctgt ataattttta aagtgcagct
4441 ctctctaaca aatgtgcctt acaactcctg attaaacggc gtcttgaagg ttttaaaaaa
4501 aaaaaaaaaa aaaaaaaaaa aaa
//