LOCUS CR933648 4883 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp313B047 (from clone DKFZp313B047).
ACCESSION CR933648
VERSION CR933648.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4883)
AUTHORS Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Medigenomix (Martinsried/Germany) within the cDNA
sequencing
consortium of the German Genome Project.
This clone (DKFZp313B047) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp313B047
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4883
/db_xref="H-InvDB:HIT000306830"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="313 (synonym: hlcc2). Vector pTriplEx2; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp313B047"
/tissue_type="bone marrow"
/note="bifunctional aminoacyl-tRNA synthetase"
/db_xref="taxon:9606"
CDS join(110..3169,3171..4649)
/codon_start=1
/gene="DKFZp313B047"
/product="hypothetical protein"
/db_xref="GOA:P07814"
/db_xref="H-InvDB:HIT000306830.13"
/db_xref="HGNC:HGNC:3418"
/db_xref="InterPro:IPR000738"
/db_xref="InterPro:IPR000924"
/db_xref="InterPro:IPR001412"
/db_xref="InterPro:IPR002314"
/db_xref="InterPro:IPR004046"
/db_xref="InterPro:IPR004154"
/db_xref="InterPro:IPR004499"
/db_xref="InterPro:IPR004526"
/db_xref="InterPro:IPR006195"
/db_xref="InterPro:IPR009068"
/db_xref="InterPro:IPR011035"
/db_xref="InterPro:IPR014729"
/db_xref="InterPro:IPR016061"
/db_xref="InterPro:IPR017449"
/db_xref="InterPro:IPR020056"
/db_xref="InterPro:IPR020058"
/db_xref="InterPro:IPR020059"
/db_xref="InterPro:IPR033721"
/db_xref="InterPro:IPR036282"
/db_xref="InterPro:IPR036621"
/db_xref="PDB:1FYJ"
/db_xref="PDB:4HVC"
/db_xref="PDB:4K86"
/db_xref="PDB:4K87"
/db_xref="PDB:4K88"
/db_xref="PDB:5A1N"
/db_xref="PDB:5A34"
/db_xref="PDB:5A5H"
/db_xref="PDB:5BMU"
/db_xref="PDB:5V58"
/db_xref="PDB:5VAD"
/db_xref="PDB:5Y6L"
/db_xref="UniProtKB/Swiss-Prot:P07814"
/protein_id="CAI45949.1"
/translation="MATLSLTVNSGDPPLGALLAVEHVKDDVSISVEEGKENILHVSE
NVIFTDVNSILRYLARVATTAGLYGSNLMEHTEIDHWLEFSATKLSSCDSFTSTINEL
NHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQEQLKQKKAPVHVKRWFGFLEAQQAF
QSVGTKWDVSTTKARVAPEKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAA
LLNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLHIKPDQFTYTSDHFETI
MKYAEKLIQEGKAYVDDTPAEQMKAEREQRIESKHRKNPIEKNLQMWEEMKKGSQFGQ
SCCLRAKIDMSSNNGCMRDPTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTH
ALRTTEYHDRDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGW
DDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYV
ALLKKEVIPVNVPEAQEEMKEVARHPKNPEVGLKPVWYSPKVFIEGADAETFSEGEMV
TFINWGNLNITKIHKNADGKIISLDAKLNLENKDYKKTTKVTWLAETTHALPIPVICV
TYEHLITKPVLGKDEDFKQYVNKNSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQ
PYEPVSPYSCKEAPCVLIYIPDGHTKEMPTSGSKEKTKVEATKNETSAPFKERPTPSL
NNNCTTSEDSLVLYNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKEKTGQE
YKPGNPPAEIGQNISSNSSASILESKSLYDEVAAQGEVVRKLKAEKSPKAKINEAVEC
LLSLKAQYKEKTGKEYIPGQPPLSQSSDSSPTRNSEPAGLETPEAKVLFDKVASQGEV
VRKLKTEKAPKDQVDIAVQELLQLKAQYESLIGVEYKPVSATGAEDKDKKKKEKENKS
EKQNKPQKQNDGQRKDPSKNQGGGLSSSGAGEGQGPKKQTRLGLEAKKEENLADWYSQ
VITKSEMIEYHDVSGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALE
KEKTHVADFAPEVAWVTRSGKTELAEPIAIRPTSETVMYPAYAKWVQSHRDLPIKLNQ
WCNVVRWEFKHPQPFLRTREFLWQEGHSAFVTVEEAAEEVLQILDLYAQVYEELLAIP
VVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIP
GEKQFAYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALSEEDK
EALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQ
FVAVRRDTGEKLTVAENEAETKLQAILEDIQVTLFTRASEDLKTHMVVANTMEDFQKI
LDSGRIVQIPFCGEIDCEDWIKKTTARDQDLEPGAPSMGAKSLCIPFKPLCELQPGAK
CVCGKNPAKYYTLFGRSY"
BASE COUNT 1601 a 922 c 1130 g 1230 t
ORIGIN
1 cggcggcgtc gggtacgcgc acacgttgca tcttcttcct ttcgcggggt cctccgtagt
61 tctggcacga gccaggcgta ctgacaggtg gaccagcgga ctggtggaga tggcgacgct
121 ctctctgacc gtgaattcag gagaccctcc gctaggagct ttgctggcag tagaacacgt
181 gaaagacgat gtcagcattt ccgttgaaga agggaaagag aatattcttc atgtttctga
241 aaatgtgata ttcacagatg tgaattctat acttcgctac ttggctagag ttgcaactac
301 agctgggtta tatggctcta atctgatgga acatactgag attgatcact ggttggagtt
361 cagtgctaca aaattatctt catgtgattc ctttacttct acaattaatg aactcaatca
421 ttgcctgtct ctgagaacat acttagttgg aaactccttg agtttagcag atttatgtgt
481 ttgggccacc ctaaaaggaa atgctgcctg gcaagaacag ttgaaacaga agaaagctcc
541 agttcatgta aaacgttggt ttggctttct tgaagcccag caggccttcc agtcagtagg
601 taccaagtgg gatgtttcaa caaccaaagc tcgagtggca cctgagaaaa agcaagatgt
661 tgggaaattt gttgagcttc caggtgcgga gatgggaaag gttaccgtca gatttcctcc
721 agaggccagt ggttacttac acattgggca tgcaaaagct gctcttctga accagcacta
781 ccaggttaac tttaaaggga aactgatcat gagatttgat gacacaaatc ctgaaaaaga
841 aaaggaagat tttgagaagg ttatcttgga agatgttgca atgttgcata tcaaaccaga
901 tcaatttact tatacttcgg atcattttga aactataatg aagtatgcag agaagctaat
961 tcaagaaggg aaggcttatg tggatgatac tcctgctgaa cagatgaaag cagaacgtga
1021 gcagaggata gaatctaaac atagaaaaaa ccctattgag aagaatctac aaatgtggga
1081 agaaatgaaa aaagggagcc agtttggtca gtcctgttgt ttgcgagcaa aaattgacat
1141 gagtagtaac aatggatgca tgagagatcc aaccctttat cgctgcaaaa ttcaaccaca
1201 tccaagaact ggaaataaat acaatgttta tccaacatat gattttgcct gccccatagt
1261 tgacagcatc gaaggtgtta cacatgccct gagaacaaca gaataccatg acagagatga
1321 gcagttttac tggattattg aagctttagg cataagaaaa ccatatattt gggaatatag
1381 tcggctaaat ctcaacaaca cagtgctatc caaaagaaaa ctcacatggt ttgtcaatga
1441 aggactagta gatggatggg atgacccaag atttcctacg gttcgtggtg tactgagaag
1501 agggatgaca gttgaaggac tgaaacagtt tattgctgct cagggctcct cacgttcagt
1561 cgtgaacatg gagtgggaca aaatctgggc gtttaacaaa aaggttattg acccagtggc
1621 tccacgatat gttgcattac tgaagaaaga agtgatccca gtgaatgtac ctgaagctca
1681 ggaggagatg aaagaagtag ccagacaccc aaagaatcct gaggttggct tgaagcctgt
1741 gtggtatagt cccaaagttt tcattgaagg tgctgatgca gagacttttt cggagggtga
1801 gatggttaca tttataaatt ggggcaacct caacattaca aaaatacaca aaaatgcaga
1861 tggaaaaatc atatctcttg atgcaaagtt gaatttggaa aacaaagact acaagaaaac
1921 cactaaggtc acttggcttg cagagactac acatgctctt cctattccag taatctgtgt
1981 cacttatgag cacttgatca caaagccagt gctaggaaaa gacgaggact ttaagcagta
2041 tgtcaacaag aacagtaagc atgaagagct aatgctaggg gatccctgcc ttaaggattt
2101 gaaaaaagga gatattatac aactccagag aagaggattc ttcatatgtg atcaacctta
2161 tgaacctgtt agcccatata gttgcaagga agccccgtgt gttttgatat acattcctga
2221 tgggcacaca aaggaaatgc caacatcagg gtcaaaggaa aagaccaaag tagaagccac
2281 aaaaaatgag acctctgctc cttttaagga aagaccaaca ccttctctga ataataattg
2341 tactacatct gaggattcct tggtccttta caatagagtg gctgttcaag gagatgtggt
2401 tcgtgaatta aaagccaaga aagcaccaaa ggaagatgta gatgcagctg taaaacagct
2461 tttgtctttg aaagctgaat ataaggagaa aactggccag gaatataaac ctggaaaccc
2521 tcctgctgaa ataggacaga atatttcttc taattcctca gcaagtattc tggaaagtaa
2581 atctctgtat gatgaagttg ctgcacaagg ggaggtggtt cgtaagctaa aagctgaaaa
2641 atcccctaag gctaaaataa atgaagctgt agaatgctta ctgtccctga aggctcagta
2701 taaagaaaaa actgggaagg agtacatacc tggtcagccc ccattatctc aaagttcgga
2761 ttcaagccca accagaaatt ctgaacctgc tggtttagaa acaccagaag cgaaagtact
2821 ttttgacaaa gtagcttctc aaggggaagt agttcggaaa cttaaaactg aaaaagcccc
2881 taaggatcaa gtagatatag ctgttcaaga actccttcag ctaaaggcac agtacgagtc
2941 tttgatagga gtagagtata agcctgtgtc ggccactgga gctgaggaca aagataagaa
3001 gaagaaagaa aaagaaaata aatctgaaaa gcagaataag cctcagaaac aaaatgatgg
3061 ccaaaggaaa gacccttcta aaaaccaagg aggtgggctc tcatcaagtg gagcaggaga
3121 agggcagggg cctaagaaac agaccaggtt gggtcttgag gcaaaaaaaa gaagaaaatc
3181 ttgctgattg gtattctcag gtcatcacaa aatcagaaat gattgaatac catgacgtaa
3241 gtggctgtta tattcttcgt ccctgggcct atgccatttg ggaagccatc aaggactttt
3301 ttgatgctga gatcaagaaa cttggtgttg aaaactgcta cttccccatg tttgtgtctc
3361 aaagtgcatt agagaaagag aagactcatg ttgctgactt tgccccagag gttgcttggg
3421 ttacaagatc tggcaaaacc gagctggcag aaccaattgc cattcgtcct actagtgaaa
3481 cagtaatgta tcctgcatat gcaaaatggg tacaatcaca cagagacctg cccatcaagc
3541 tcaatcagtg gtgcaatgtg gtgcgttggg aattcaagca tcctcagcct ttcctacgta
3601 ctcgtgaatt tctttggcag gaagggcaca gtgcttttgt taccgtggaa gaggcagcgg
3661 aagaggtctt gcagatactt gacttatatg ctcaggtata tgaagaactc ctggcaattc
3721 ctgttgttaa aggaagaaag acggaaaagg aaaaatttgc aggaggagac tatacaacta
3781 caatagaagc atttatatct gctagtggaa gagctatcca gggaggaaca tcacatcatt
3841 tagggcagaa tttttccaaa atgtttgaaa tcgtttttga agatccaaag ataccaggag
3901 agaagcaatt tgcctatcaa aactcctggg gcctgacaac tcgaactatt ggtgttatga
3961 ccatggttca tggggacaac atgggtttag tattaccacc ccgtgtagca tgtgttcagg
4021 tggtgattat tccttgtggc attaccaatg cactttctga agaagacaaa gaagcgctga
4081 ttgcaaaatg caatgattat cgaaggcgat tactcagtgt taacatccgc gttagagctg
4141 atttacgaga taattattct ccaggttgga aattcaatca ctgggagctc aagggagttc
4201 ccattagact tgaagttggg ccacgtgata tgaagagctg tcagtttgta gccgtcagac
4261 gagatactgg agaaaagctg acagttgctg aaaatgaggc agagactaaa cttcaagcta
4321 ttttggaaga catccaggtc acccttttca caagggcttc tgaagacctt aagactcata
4381 tggttgtggc taatacaatg gaagactttc agaagatact agattctgga aggattgttc
4441 agattccatt ctgtggggaa attgactgtg aggactggat caaaaagacc actgccaggg
4501 atcaagatct tgaacctggt gctccatcca tgggagctaa aagcctttgc atccccttca
4561 aaccactctg tgaactgcag cctggagcca aatgtgtctg tggcaagaac cctgccaagt
4621 actacacctt atttggtcgc agctactgag ggatgaacga aagccccctc ttcaactcct
4681 ctcacttttt aaagcattga tattagtatc ttctcagata cagaccgttt tatgattttt
4741 taaaaagtaa aagttctaaa atgaagtcac acaggacaat tattcttatg cctaagttaa
4801 cagtggataa aagacttttc tgtaaacaac tccagtaata aatatcatga acgaaaaaaa
4861 aaaaaaaaat aaaaaaaaaa aaa
//