LOCUS CR933612 5980 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686E0868 (from clone DKFZp686E0868).
ACCESSION CR933612
VERSION CR933612.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5980)
AUTHORS Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Medigenomix (Martinsried/Germany) within the cDNA
sequencing
consortium of the German Genome Project.
This clone (DKFZp686E0868) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686E0868
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..5980
/db_xref="H-InvDB:HIT000306804"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686E0868"
/tissue_type="endometrium carcinoma cell line"
/note="PHD finger protein 8, in-frame stop"
/db_xref="taxon:9606"
CDS 341..1489
/codon_start=1
/gene="DKFZp686E0868"
/product="hypothetical protein"
/db_xref="GOA:Q9UPP1"
/db_xref="H-InvDB:HIT000306804.12"
/db_xref="HGNC:HGNC:20672"
/db_xref="InterPro:IPR001965"
/db_xref="InterPro:IPR003347"
/db_xref="InterPro:IPR011011"
/db_xref="InterPro:IPR019786"
/db_xref="InterPro:IPR019787"
/db_xref="InterPro:IPR041070"
/db_xref="PDB:2WWU"
/db_xref="PDB:3K3N"
/db_xref="PDB:3K3O"
/db_xref="PDB:3KV4"
/db_xref="PDB:4DO0"
/db_xref="UniProtKB/Swiss-Prot:Q9UPP1"
/protein_id="CAI45929.1"
/translation="MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAAD
IDLYHCPNCEVLHGPSIMKKRRGSSKGHDTHKGKPVKTGSPTFVRELRSRTFDSSDEV
ILKPTGNQLTVEFLEENSFSVPILVLKKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVI
DVTRQADCKMKLGDFVKYYYSGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVEN
LWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANL
TLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNF
LHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILDIFRGL"
BASE COUNT 1479 a 1567 c 1505 g 1429 t
ORIGIN
1 ggactatccc agaattcgac gcgcgtcgcc gtaggggccg gaactaccgg acgagcctcc
61 gctgaggcgc ttcgcagtcc cggagctagc ccggctgccg gcgtgtcgct ggggctgagc
121 tccgcgggcg tggagtcctt gcagcccaaa gcatgaggag gtccctgtag gattctggac
181 tgaagacgtt cttgtcaggt ttggggcgtg aggaggttcc tgtcagttgg ggaagcgtta
241 agattcctct atcgtccaga gaggacgcgt gctgccgcct cccgcccctc ttgacacgac
301 gaacctggcc ggccgcagaa cgctccaggg ccgagcgaag atggcctcgg tgccggtgta
361 ttgcctctgc cggctgcctt acgatgtgac ccgcttcatg atcgagtgtg acatgtgcca
421 ggactggttt catggcagtt gtgttggtgt tgaagaggag aaggctgctg acattgacct
481 ctaccactgc cccaactgtg aagtcttgca tgggccctcc attatgaaaa aacgccgtgg
541 atcttcaaag gggcatgata cacacaaggg gaaaccagtg aagaccggga gccctacgtt
601 cgtcagagag ctccggagta ggacttttga cagctcagat gaagtgattc tgaagcccac
661 tggaaatcaa ctgaccgtgg aattcctgga agaaaatagc ttcagtgtgc ccatcctggt
721 cctgaagaag gatgggttgg gcatgacgct gccctcgcca tcattcactg tgagggatgt
781 tgaacactat gttggttctg acaaagagat tgatgtgatt gatgtgaccc gccaggctga
841 ctgcaagatg aagcttggtg attttgtgaa atactattac agcgggaaga gggagaaagt
901 cctcaatgtc attagtttgg aattctctga taccagactt tctaaccttg tggagacacc
961 gaagattgtt cgaaagctgt catgggtcga aaacttgtgg ccagaggaat gtgtctttga
1021 gagacccaat gtacagaagt actgcctcat gagtgtgcga gatagctata cagactttca
1081 cattgacttt ggtggcacct ctgtctggta ccatgtactc aagggtgaaa agatcttcta
1141 cctgatccgc ccaacaaatg ccaatctgac tctctttgag tgctggagca gttcctctaa
1201 tcagaatgag atgttctttg gggaccaggt ggacaagtgc tacaagtgtt ccgtgaagca
1261 aggacagaca cttttcattc ccacagggtg gattcatgct gtgctgacgc ctgtggactg
1321 ccttgccttt ggagggaact tcttacacag ccttaacatc gagatgcagc tcaaagccta
1381 tgagattgag aagcggctga gcacagcaga cctcttcaga ttccccaact ttgagaccat
1441 ctgttggtat gtgggaaagc acatcctgga catctttcgc ggtttgtgag agaacaggag
1501 acaccctgcc tcctacctgg tccatggtgg caaagccttg aacttggcct ttagagcctg
1561 gacaaggaaa gaagctctgc cagaccatga ggatgagatc ccggagacag tgcgaaccgt
1621 acagctcatt aaagatctgg ccagggagat ccgcctggtg gaagacatct tccaacagaa
1681 cgttgggaag acgagcaata tctttgggct gcagaggatc ttcccagccg gctccattcc
1741 cctaaccagg ccagcccatt ccacttcagt gtccatgtcc aggctgtcac tgccttccaa
1801 aaatggttca aagaagaaag gcctgaagcc caaggaactc ttcaagaagg cagagcgaaa
1861 gggcaaggag agttcagcct tggggcctgc tggccagttg agctataatc tcatggacac
1921 atacagtcat caggcactga agacaggctc tttccagaaa gcaaagttca acatcactgg
1981 tgcctgcttg aatgactcag atgacgactc accagacttg gaccttgatg gaaatgagag
2041 cccattggcc ctattgatgt ctaacggcag tacgaaaagg gtgaagagtt tatccaaatc
2101 tcggcgaacc aagatagcaa agaaggtaga caaggctagg ctgatggcag aacaggtgat
2161 ggaagacgaa tttgacttgg attcagatga tgagctgcag attgacgaga gattgggaaa
2221 ggagaaggcg accctgataa taagaccaaa atttccccgg aaattgcccc gtgcgaagcc
2281 ttgctctgac cccaaccgag ttcgtgaacc aggagaagtt gagtttgaca ttgaggagga
2341 ctatacaaca gatgaggaca tggtggaagg ggttgaaggc aagcttggga atggtagtgg
2401 cgctggtggc attcttgatc tgctcaaggc cagcaggcag gtggggggac ctgactatgc
2461 tgccctcacc gaggccccag cttctcccag cactcaggag gccatccagg gcatgctgtg
2521 catggccaac ctgcagtcct catcgtcctc accggctacc tctagcctgc aggcctggtg
2581 gactggggga caggatcgaa gcagtgggag ctccagcagt gggctgggca cagtgtctaa
2641 cagtcctgct tcccagcgca ccccagggaa gcggcccatc aagcggccag catactggag
2701 aaccgagagc gaggaggagg aggagaacgc cagtctggat gaacaggaca gcttgggagc
2761 gtgcttcaag gatgcagagt atatctatcc ttcactggag tctgatgatg atgaccctgc
2821 tttgaaatct cgacccaaga aaaagaagaa ttcagatgat gctccatgga gtcctaaagc
2881 ccgcgtgacc ccaactctgc cgaagcagga ccgtcctgtg cgtgagggga cccgggtagc
2941 ctctattgag acaggtttgg ctgcagcagc tgcaaagctg gcccagcagg agctacagaa
3001 ggcccaaaag aagaaatata tcaagaagaa gcctttgctg aaggaggtag aacagcctcg
3061 ccctcaagac tccaatctca gtctgacagt accagccccc actgtggctg ccacaccaca
3121 acttgtcacc tcctcctcac ccctgcctcc tcctgagcct aaacaagagg ccctgtcagg
3181 aagtctcgct gaccatgagt acaccgctcg tcccaatgcc tttggcatgg cccaggcaaa
3241 ccgcagcacc acacctatgg cccccggtgt cttcttgacc cagcggcgcc cttcagttgg
3301 ctcccagagc aatcaggcag gacaaggaaa gcgtcccaaa aagggcctgg ccacagcaaa
3361 gcagagactc ggccgtatcc tgaaaatcca cagaaatggc aaactacttc tgtgagccct
3421 cctgtgtccc acccctcacc cctttatccc cattgccttc tccattgtca actcttgggg
3481 cactcctgga tcctatctgc cctggacaag gtgctgaggt gcattgtcct gctttcttgg
3541 gacttaccaa aggcacggac ccctccaccg actccttcta gttcccttcc ccactttcac
3601 tagagcatcc tgcctgcctt ctccactgag gagcaggtaa atgggagagg tttccagctg
3661 actagaaccc tcttttctac tcgtccaaac cactcccgtc acctgccttg tctgttcttt
3721 attcttcatc ccccgctaga gctggaaggc aggatgagga gaggtatgaa ggagcctgag
3781 ccatgaagtg ggaagcccag tgcttgacac tttctgcaac tctagcccta tatccagaag
3841 cctgcccacc tccacccatt ctgtttgccc catttcccca gtccagtgga catgccccac
3901 ctccagactt gctcatggga gaaggctgtg gtctctgccc cctcttgcca aatgcttcat
3961 ggaaatgaag aggaaggcct agagcctcct tcctgcccca ctgtgggcca tttccagaag
4021 tggcctagaa atgccaactt cacttacctt tcaaaagaaa ggtgattcct atcacttgtc
4081 aaggtaggga gaggtcagat gcccaagcct ttgaccacgg ttttgtagcc tgttggagga
4141 agctactttt agctggctac acatgaggcc acttgtttta gggtgagctc cagggatttg
4201 cctggatttt gaaatcatgt agaacattat ccacgtggct gtggctgtgg ctgtggctgg
4261 gccctggcag gtggaaaacc atctcccaga aacctgaaag cacctgccaa tgacgcagat
4321 aaccctggcc ctacagcctg cttgctccgc ctataccaca gagcacagcc tggacattat
4381 ggagggtgtg gcgggacggc ccacacctgg gtcctccatc gggaactttt catgcttctt
4441 tctccacctg aggtcttggt ctgaagaaga cctcaggact cacatcttca ctcctgggcc
4501 tttgcacttc cagacgacag gtcatcgttc aagcagaatg cagacaggcc attcacgagc
4561 ccaagttgaa gagaagagac gcccatccgt gaaggagcag accatccatc cgatcctccc
4621 cttcccctgt ccttccttcg tggattgtct ccattgtcca gacagtgccc ccacctccca
4681 ccgccttgcc tcactggcaa tctggactcg atggagaaca tccccccacc tccatttggc
4741 actacccaag tggagtgtac ccttgccctt tccacctgta ccacccactc caacctcacc
4801 ccagcttgcc caatgcttct ggggaattta atagctacca tgcaggccac agggaatttg
4861 tgaggcttct tttgtcatct ttgtatctcc agtttgtctt tcttttctcc atagccctgc
4921 ctctactttc cttccttgga atcaggggtt cctttagccc atttgctttc tctaccttgg
4981 ggaccccagg ggccaagcag ttctccatct agtcacacca aaggcaaaaa gcctggctac
5041 ctccccccta gcacgtgagt ccctactccc ctcccctctg tttctgccca gctttgctta
5101 ttttggggat ttcaaggcag cagagggtag tgaggggaga gcaggagaag cctctgtcct
5161 gtataggcaa ctgcctgact atgcggtgac tgctgtaacc aagatcaggt ccccagccct
5221 tttgtccatt aacacccctt cttgatcttt caaaggcagc taattgctag caaatccccc
5281 cgattccggc cttttccctc tatttctttg ttagaagttt tctgtggagc tgaaacccag
5341 cctctgtttg actgggtttc atttagctta gttgggttct tagagccccc tgtttgttgt
5401 tttgtgttgt ttccaatgaa aagcaagttt accctcagag ttatgctttt ccaaagaggc
5461 tgatgtcttt gtttttgttt ttttaatgtt tcaggttcta agtgaagtga gttggggagg
5521 ggttgggagt gttagtaatc aaggtttaga acaccatgag atagttaccc ctgatctcca
5581 gtccctagct gggggctgga cagggggaag ggagagagga tttctattca cctttaatat
5641 atttttacaa aaaaagcaaa caatttaaaa acaagcccac cgcttctgta catgtctaaa
5701 tatattttta gaagtgggta ggattgtgaa tttctgatgc agggcctttt tataaatagg
5761 ttagggtagc atcattcaga cttctctgtt gtttttgtcc ctgtcttttt cttatgttgt
5821 gttactaatg taatttatat tttttttaga tcctcccttt cctatagaga taaaagtgat
5881 ttatcttggc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
5941 aaaaaaaaaa aaaaaaaaaa gaaaaaaaaa aaaaaaaaaa
//