LOCUS CR749627 4787 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686D1968 (from clone DKFZp686D1968).
ACCESSION CR749627
VERSION CR749627.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4787)
AUTHORS Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (17-AUG-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Medigenomix (Martinsried/Germany) within the cDNA
sequencing
consortium of the German Genome Project.
This clone (DKFZp686D1968) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686D1968
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4787
/db_xref="H-InvDB:HIT000306628"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686D1968"
/tissue_type="endometrium carcinoma cell line"
/note="CLIP-associating protein 1, N-terminus truncated"
/db_xref="taxon:9606"
CDS join(<3..1268,1268..1687)
/codon_start=1
/gene="DKFZp686D1968"
/product="hypothetical protein"
/db_xref="GOA:Q68D09"
/db_xref="H-InvDB:HIT000306628.13"
/db_xref="InterPro:IPR011989"
/db_xref="InterPro:IPR016024"
/db_xref="InterPro:IPR028399"
/db_xref="InterPro:IPR034085"
/db_xref="UniProtKB/TrEMBL:Q68D09"
/protein_id="CAH18421.1"
/translation="LLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRF
IVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVR
KAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGR
TPSRHTSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFR
SQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPP
RAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKEL
SNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRV
LREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVL
CPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASV
FCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS"
BASE COUNT 1286 a 1152 c 1095 g 1254 t
ORIGIN
1 ttcttctcac acaattactt aagaaaatgg gagcagattt acttggatct gtgcaagcaa
61 aagttcaaaa ggctctagat gtcacaaggg actcctttcc atttgatcaa caatttaaca
121 ttttgatgag atttattgtg gatcaaactc aaactccaaa cctcaaggtc aaagttgcaa
181 tcctgaaata cattgagtct ctggccagac agatggatcc aacagatttt gtaaactcta
241 gtgagacaag gcttgctgtt tctagaatca taacctggac aacagaacca aagagttcag
301 acgtgagaaa ggcagcacag attgtgctaa tctctctgtt tgaattgaat actcctgaat
361 ttaccatgtt acttggtgcc ttgccaaaaa cattccagga tggtgccacc aaactcctgc
421 acaaccacct caagaattcc agtaacacca gtgtgggctc tccaagcaat acgattggcc
481 ggacgccctc ccgacacacc agcagcagga ccagccccct gacctcaccc accaactgtt
541 cccatggggg tctgtctcca agcatgctgg actatgatac agagaacctg aactctgaag
601 aaatctatag ttctctacgt ggagttacag aagccattga aaagtttagt tttcgaagcc
661 aagaagatct gaatgagcca attaaacgag atggcaaaaa ggagtgtgat attgtgtccc
721 gcgatggggg cgctgcctcc cctgccactg agggccgggg gggtagtgaa gtagaaggag
781 gccggacagc tctggataac aagacctcac tactcaacac ccagcctccg cgcgccttcc
841 cggggccgcg ggcgcgagac tacaacccgt acccctactc agatgccatc aacacctacg
901 acaagaccgc cctgaaagag gctgtgttcg atgacgacat ggagcagctt cgagacgtgc
961 ccatcgacca ttctgacctg gtggctgacc ttctgaaaga gctgtccaac cacaatgagc
1021 gagtggagga acggaaggga gccctgctgg agctgctcaa gatcacgcgg gaagacagcc
1081 ttggtgtctg ggaggagcac ttcaagacca ttctgctcct gctgctggag acccttggag
1141 acaaagacca ttcaattcga gcactggcgt taagagtttt gagggaaatt ctgagaaatc
1201 aaccagcaag atttaaaaac tacgccgagc tgacgattat gaagactctg gaagcccaca
1261 aagactccat aaggaggtgg tgagagcggc tgaggaggct gcgtccacac tggccagttc
1321 catccacccg gagcagtgca tcaaggtgct ctgccccatc atccagacgg ccgactaccc
1381 catcaacctt gctgccatca agatgcagac caaagtcgtc gagaggatcg caaaggagtc
1441 attgctgcag ctccttgtcg acatcatccc aggcttgctg cagggttatg acaacaccga
1501 aagtagtgtg cgtaaggcca gcgtgttttg cttagtggca atttattccg taatcggaga
1561 agacctgaaa cctcaccttg cacagctcac agggagcaag atgaagctac taaacttata
1621 cataaagagg gcccagacca ccaacagcaa cagcagctcc tcctccgatg tctccacgca
1681 cagctaatgg cagtacctgt ctcttgtgta gacctagaag caatcggtgg tgcctctcag
1741 agacctttcc ccaccccctt catcggctgc ccagtcagta caaggaggcc cacaaatatt
1801 tattacaatc agtattttgg tcccttccag cttttctgta gaatcttact ggtattgaat
1861 gtaaaggaag caaggcctgt attgcagtct tcatacaaaa caaaaggaat aagaacagaa
1921 aagagccata ctgaaacatg tcttgtacag cctgctgaga tggcgaaacc ctgtgtgtgg
1981 ggtgcagttt ttaaaaatca gagcgctcta gccactactt ggtagaaagt agcatttttt
2041 ttttcagtta ataacatatt tgggggtggg gtggggtgtt actttgtgtt cttcctcctt
2101 agcctatttt cttgtgcgta tggtctgtgt ggggcccctt tcacagctga caccacgaaa
2161 ggtgatatat ctttaagttg tgttctgaga cctactaaaa atgggaatca agtcttggca
2221 agaacagtct gaagatggcc ttttaacaaa cgctgggaat tttgcttgtc atatccagac
2281 tggaggccga ctgccctggc tttcagcgta gaattgggag tgcaccctga cagtctcctt
2341 ccagctctcc ctaatcgact ccaccgacaa ggtccctacc ccagagcttc catgcaaagg
2401 aattcttcaa gtttaaatct ggacacaaaa ataagataaa tgtatggcat catttaggga
2461 tgcctgagat ggcagttcat gaagcacaga agataaagaa gaagtctttc atctttactg
2521 ctgagatcct tgggaacact gttgtcatgg gggctctgcc aagaccctca tctctgggct
2581 acacggtgat tcagattgag caccaacttg tttcctcccc tcaaagttct gcctaagccg
2641 ttcagttcta acatggtctc agttaatctg gtaaatggca tctttaccat cttagttctg
2701 acttctcagt ttaatgtggg attaagagcc aagaaaagcc tagagagact ggatatcaca
2761 atttttttta attttataaa ctgaagtagt tccttgaatg tctgttgatg aaatagtcac
2821 tgtttaagga aaaaagtaat tatgaggtgt agcagattgc agaaaaacag gattagaaac
2881 acacttaaaa agaacacaca tttagagtct ctcttcctcc tcagcgaacc actaggcccc
2941 ctttttaaaa acacctttag agcctaatta ctccaataaa agtaactaga ggtttggagt
3001 ctggttaaat aaattctgag taaaattctt aagccaaatg gaaattctta atgcaatcat
3061 gaggacttct attgtctctt actgttgtat tagatcctat aaattgaact gatttttcca
3121 taaggaaaat gcttcttttg agattaattc taataacgta tttgctattg cagtgcagag
3181 cccactgcaa ctgctaggac tgaaagcaga ggctgggtgc cagagcacgt gattcttaac
3241 atcatttcca cagacccctc tgccctgacc ctctgcattg gatgcaggaa gctgggaaag
3301 actgatgttg atttggaaac atgggctgaa aatgaaggcc ccatagtgca taggaacagt
3361 aaagccaggg tgctgacgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtggtgt
3421 tgcgtgtgtt tgtgcgtgca ccctacacat gtgtggtacc tcactgctgc tgtttaggga
3481 acttgaggga cgcgtttcaa ggggttgggt attactgacg agctttggct caaaatatag
3541 caggaccagg tcttttgttg ataagtactg tttgtttatt aatatgtcat taatggtatt
3601 tcttttttac actctacaag tgaattaggg agtctcttgt tgaccccttt gttgcaggaa
3661 tgtgcgtcgg gctaggttat ccatgagttt ctttattcct aatgcagtta gaaagacctt
3721 tctccttgag ctctttgact cccagaaggt accccagtcc ccagtgtact tagaaaggat
3781 ctcgaacatt gctggacgtc ctcatagtac tcacaaaggg ctagccttga atgtcactcg
3841 cccagtcttc agtctcctga cttagagata caatcacgtc acaggtctct tggcctcaat
3901 ctgaaaactg ctgccgccgc gccgaggaga ctcgcatgcc gccaccacct cactgggagg
3961 gcgccgagcc caccgtcgcc ccctagaccc tgacagctgc agctgccttg ccttgccgcc
4021 gcctccctgc agggcccctg ttccaatgaa aaacagaaca caaaagagca gagcacctaa
4081 gcctgtctct gcctccctgt ctacctgact ggccagggcc caagaccccc gctgctccac
4141 tgcggggctg ggcgggctga ctccctgctt cctccaagct gctgcctccc ctgcagccag
4201 ggtctgggca gggtgcagcc ggtcctcggg gcacgcagct tcctccaagt acactgtgtg
4261 tgcttcccgg acctgcggcg atgccacggg cctgcctttt ctatgcgcct cactagctta
4321 ccaccctgtg caggtaatgc aactgacttt gtctcatcag tctttttctt tccctgccac
4381 cctttattta tcaagcgtaa tgttacactt taaaggacag caaataagaa ctttgtagaa
4441 tcccaccagg actttgctaa caataatgtt tggaaataaa gaagtgctct gaaaaaatat
4501 cagccaccaa aatagttatg ttggcactgt gttcacacgc atggtcccca cacccccagg
4561 ttgggtgggt ttttttgttt tttgggtttt tttggggggg ggctttttca tgttacatcc
4621 atatctgtat ttatatctta tttgtttcac tttcaagtgt atcatggcaa atgtacagat
4681 ttttttgtta ataatgtgct aggatttgct aaaaaagaaa aaaaaaaaac ccttttgagt
4741 ttgccctaga ataaatgaga cttaattcaa aaaaaaaaaa aaaaaaa
//