LOCUS CR749550 4347 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp779K1053 (from clone DKFZp779K1053).
ACCESSION CR749550
VERSION CR749550.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4347)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (17-AUG-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp779K1053) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp779K1053
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4347
/db_xref="H-InvDB:HIT000306560"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="779 (synonym: hncc1). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp779K1053"
/tissue_type="liver"
/note="histone deacetylase 9 isoform 3, differentially
spliced"
/db_xref="taxon:9606"
CDS 109..1890
/codon_start=1
/gene="DKFZp779K1053"
/product="hypothetical protein"
/db_xref="H-InvDB:HIT000306560.12"
/db_xref="InterPro:IPR024643"
/db_xref="UniProtKB/TrEMBL:Q68D71"
/protein_id="CAH18349.1"
/translation="MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREK
QLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQERIKLQQELLAIKQQQEL
LEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSAT
KDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPL
RKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGS
GPSSPNNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNIT
LGLPAVPSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPN
SSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLN
RTQSAPLPQSTLARLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEA
EEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEM
ESGEQAAFMQQVIGKDLAPGFVIKVII"
BASE COUNT 1469 a 808 c 836 g 1234 t
ORIGIN
1 agctgaagta agagtgactg gaatatgctg cagacaattt acgagagtga ctcctgtttt
61 tcctcagatg gggtggctgg acgagagcag ctcttggctc agcaaagaat gcacagtatg
121 atcagctcag tggatgtgaa gtcagaagtt cctgtgggcc tggagcccat ctcaccttta
181 gacctaagga cagacctcag gatgatgatg cccgtggtgg accctgttgt ccgtgagaag
241 caattgcagc aggaattact tcttatccag cagcagcaac aaatccagaa gcagcttctg
301 atagcagagt ttcagaaaca gcatgagaac ttgacacggc agcaccaggc tcagcttcag
361 gagcgtatca agttgcaaca ggaacttcta gccataaaac agcaacaaga actcctagaa
421 aaggagcaga aactggagca gcagaggcaa gaacaggaag tagagaggca tcgcagagaa
481 cagcagcttc ctcctctcag aggcaaagat agaggacgag aaagggcagt ggcaagtaca
541 gaagtaaagc agaagcttca agagttccta ctgagtaaat cagcaacgaa agacactcca
601 actaatggaa aaaatcattc cgtgagccgc catcccaagc tctggtacac ggctgcccac
661 cacacatcat tggatcaaag ctctccaccc cttagtggaa catctccatc ctacaagtac
721 acattaccag gagcacaaga tgcaaaggat gatttccccc ttcgaaaaac tgcctctgag
781 cccaacttga aggtgcggtc caggttaaaa cagaaagtgg cagagaggag aagcagcccc
841 ttactcaggc ggaaggatgg aaatgttgtc acttcattca agaagcgaat gtttgaggtg
901 acagaatcct cagtcagtag cagttctcca ggctctggtc ccagttcacc aaacaatggg
961 ccaactggaa gtgttactga aaatgagact tcggttttgc cccctacccc tcatgccgag
1021 caaatggttt cacagcaacg cattctaatt catgaagatt ccatgaacct gctaagtctt
1081 tatacctctc cttctttgcc caacattacc ttggggcttc ccgcagtgcc atcccagctc
1141 aatgcttcga attcactcaa agaaaagcag aagtgtgaga cgcagacgct taggcaaggt
1201 gttcctctgc ctgggcagta tggaggcagc atcccggcat cttccagcca ccctcatgtt
1261 actttagagg gaaagccacc caacagcagc caccaggctc tcctgcagca tttattattg
1321 aaagaacaaa tgcgacagca aaagcttctt gtagctggtg gagttccctt acatcctcag
1381 tctcccttgg caacaaaaga gagaatttca cctggcatta gaggtaccca caaattgccc
1441 cgtcacagac ccctgaaccg aacccagtct gcacctttgc ctcagagcac gttggctcgg
1501 ctggtcattc aacagcaaca ccagcaattc ttggagaagc agaagcaata ccagcagcag
1561 atccacatga acaaactgct ttcgaaatct attgaacaac tgaagcaacc aggcagtcac
1621 cttgaggaag cagaggaaga gcttcagggg gaccaggcga tgcaggaaga cagagcgccc
1681 tctagtggca acagcactag gagcgacagc agtgcttgtg tggatgacac actgggacaa
1741 gttggggctg tgaaggtcaa ggaggaacca gtggacagtg atgaagatgc tcagatccag
1801 gaaatggaat ctggggagca ggctgctttt atgcaacagg taataggcaa agatttagct
1861 ccaggatttg taattaaagt cattatctga acatgaaatg cattgcaggt ttggtaaatg
1921 gatatgattt cctatcagtt tatatttctc tatgatttga gttcagtgtt taaggattct
1981 acctaatgca gatatatgta tatatctata tagaggtctt tctatatact gatctctata
2041 tagatatcaa tgtttcattg aaaatccact ggtaaggaaa tacctgttat actaaaatta
2101 tgatacataa tatctgagca gttaataggc tttaaattta tcccaaagcc tgctacacca
2161 attacttcta aagaaaacaa attcactgtt attttgagtt tatgtgttga gatcagtgac
2221 tgctggatag tctcccagtc tgatcaatga agcattcgat tagtttttga ttttttgcaa
2281 catctagaat ttaattttca catcactgta cataatgtac catactatag tcttgaacac
2341 tgttaaaggt agtctgcccc ttccttcctc tctctttttt tagttaagta gaaatgttct
2401 ggtcaccatg ccagtagtcc taggttatcg tgtaggttgc aattgaacat attaggaata
2461 caggtggttt taaatatata gatgcaaatt gcagcactac tttaaatatt agattatgtc
2521 tcacatagca ctgctcattt tacttttatt ttgtgtaatt tgatgacact gtctatcaaa
2581 aaagagcaaa tgaagcagat gcaaatgtta gtgagaagta atgtgcagca ttatggtcca
2641 atcagataca atattgtgtc tacaattgca aaaaacacag taacaggatg aatattatct
2701 gatatcaagt caaaatcagt ttgaaaagaa ggtgtatcat attttatatt gtcactagaa
2761 tctcttaagt ataattccat aatgacatgg gcatataccg taacattctg gcaaataaca
2821 attagaaaag ataggtttaa caaaaaaatt tacttgtata taatgcacct tcaggaggac
2881 tatgtccttt gatgctataa aatacaaaca actttgaagg caacagaaga cactgtttat
2941 tcaagtcagt tctttgtcag gttcctgctg ttctcctaca gaaaagtgat tctgtgaggg
3001 tgaacaggaa atgccttgtg gaaacaggaa gtccaagtga ttcatgtact gaggaatgta
3061 ggaaaaaaaa tctgaggata gtgctttact ctttctgttt ttaaagggca ctctatgaat
3121 tgatttattg tctaagaaaa taacaccaca agtagggaaa ttgttacgga agcttttcac
3181 tggaacattt ccttcatatt cccttttgat atgtttacct tgttttatag gtttactttt
3241 gttaagttag ttaaaggttc gttgtattaa gaccccttta atatggataa tccaaattga
3301 cctagaatct ttgtgaggtt ttttctatta aaatatttat atttctaaat ccgaggtatt
3361 tcaaggtgta gtaacctatt tcaaaggaga tatagcagtt ttgccaaatg tagacattgt
3421 tcaactgtat gttattggca cgtgttgttt acattttgct gtgacattta aaaatatttc
3481 tttaaaaatg tcactgctaa agatacatta tcctttttta aaaagtctcc attcaaatta
3541 aattaacata actagaagtt agaaagttta aaagttttcc acataatgaa agtccttccg
3601 ataatttgac aaatagctat aataggaaca ctccctatca ccaacatatt ttggttagta
3661 tattccttca tattaaaatg actttttgtc agttgttttg cattaaaaat atggcatgcc
3721 taagataaaa ttgtatattt tttccatctc ataaatattc attttcttca aagtcttttt
3781 tcaatctcat aaaaaaggga tagtgcatct tttaaaatac attttatttg gggaggaaca
3841 tgtggctgag cagacttttg tataatatta cttcaaagat atgtaatcac aaacaaaaaa
3901 aactattttt ataatgtcat ttgagagagt ttcatcagta cagttggtgg acgttaattg
3961 tttgaatttg atagtctttg aatttaatca agaaactacc tggaaccagt gaaaaggaaa
4021 gctggactta aataatctta gaattaattg ataaatgtct cttttaaaat ctactgtatt
4081 tattataatt tacacccttg aaggtgatct cttgttttgt gttgtaaata tattgtttgt
4141 atgtttccct tcttgccttc tgttataagt ctcttccttt ctcaaataaa gtttttttta
4201 aaagaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4321 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//