LOCUS CR749518 5399 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686B22225 (from clone DKFZp686B22225).
ACCESSION CR749518
VERSION CR749518.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5399)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (17-AUG-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp686B22225) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686B22225
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..5399
/db_xref="H-InvDB:HIT000306536"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686B22225"
/tissue_type="small intestine"
/note="DNA strand-exchange protein SEP1, differentially
spliced"
/db_xref="taxon:9606"
CDS 49..5133
/codon_start=1
/gene="DKFZp686B22225"
/product="hypothetical protein"
/db_xref="GOA:Q8IZH2"
/db_xref="H-InvDB:HIT000306536.12"
/db_xref="HGNC:HGNC:30654"
/db_xref="InterPro:IPR004859"
/db_xref="InterPro:IPR016494"
/db_xref="InterPro:IPR027073"
/db_xref="InterPro:IPR040992"
/db_xref="InterPro:IPR041106"
/db_xref="InterPro:IPR041385"
/db_xref="InterPro:IPR041412"
/db_xref="UniProtKB/Swiss-Prot:Q8IZH2"
/protein_id="CAH18332.1"
/translation="MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCS
HPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRF
RSAKEAEDKIEKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLEYFVNMKISTDKS
WQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHE
AHFSLLREEVRFGGKKTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIE
RIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLP
RFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKG
QENSLCWTALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD
FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPF
KPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLI
PFIDEKRLLEAMETCNHSLKKEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIER
CCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQS
SRGENMMLEILVDAESDELTVENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLE
EPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEHYLRRKGIIINETSAVVYA
QLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVRDIRAFDSRFSNIKTLDDLFPLR
SMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDALIQNQHKYSIKYNPG
YVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKK
VGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEI
ITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRP
LEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDE
EFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSSSSSV
SSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFRPTIQEKGAVLPQ
EISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIEN
FLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMKGTRMLKEILKIDGSNTVDHKNEI
KQIANEIPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQ
IPPVSTPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEA
KEKAALFALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTANIMPSSSHLFG
SMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKE
AQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHH
KSTPIPSSRRKSRKLAVNFGVSKPSE"
BASE COUNT 1756 a 1019 c 1094 g 1530 t
ORIGIN
1 cgtttggttt cggtttggcc ctgactggga ttagtgttga cgatcgaaat gggagtcccc
61 aagttttaca gatggatctc agagcggtat ccctgtctca gcgaagtggt gaaagagcat
121 cagattcctg aatttgacaa cttgtacctg gatatgaatg gaattataca tcagtgctcc
181 catcctaatg atgatgatgt tcactttaga atttcagatg ataaaatctt tactgatatt
241 tttcactacc tggaggtgtt gtttcgcatt attaaaccca ggaaagtgtt ctttatggct
301 gtagatggtg tggctcctcg agcaaaaatg aaccagcagc gtgggaggcg ttttaggtca
361 gcaaaggagg cagaagacaa aattgaaaag gcaatagaga agggagaaac tcttcctaca
421 gaggccagat ttgattccaa ctgtatcaca ccaggaactg aatttatggc caggttacat
481 gaacatctgg agtattttgt aaatatgaaa atttccacag acaagtcatg gcaaggagtt
541 accatctact tctcaggcca tgagactcct ggagaaggag agcataaaat catggaattt
601 atcagatccg agaaagcaaa gccagatcat gatccaaaca ccagacactg tctttatggt
661 ttagatgctg acttgattat gcttggatta acaagtcatg aggcacattt ttctctctta
721 agagaagaag ttcgatttgg tggcaaaaaa acacaacggg tatgtgctcc agaagaaact
781 acatttcacc ttctacactt gtctttaatg agagagtata ttgactatga gttttcagta
841 ttaaaagaaa agatcacatt taaatatgat attgaaagga taatagatga ttggattttg
901 atggggtttc ttgttggtaa tgattttatc cctcatctac ctcatttaca tattaatcat
961 gatgcactgc ctcttcttta tggaacatat gttaccatcc tgccagaact tgggggttat
1021 attaatgaaa gtgggcacct caacttacct cgatttgaga aataccttgt gaaactatca
1081 gattttgatc gggagcactt cagtgaagtt tttgtggacc taaaatggtt tgaaagcaaa
1141 gttggtaaca agtacctcaa tgaagcagca ggtgtcgcag cagaagaagc caggaactac
1201 aaggaaaaga aaaagttaaa gggccaggaa aattctctgt gttggactgc tttagacaaa
1261 aatgaaggcg aaatgataac ttctaaggat aatttagaag atgagactga agatgatgac
1321 ctatttgaaa ctgagtttag acaatataaa agaacatatt acatgacgaa gatgggggtt
1381 gacgtagtat ctgatgactt tctggctgat caagctgcat gttatgttca ggcaatacag
1441 tggattttgc actattacta tcatggagtt cagtcctgga gctggtatta tccttatcat
1501 tatgcacctt tcctgtctga tatacacaac atcagtacac tcaaaatcca ttttgaacta
1561 ggaaaacctt ttaagccatt tgaacagctt cttgctgtac ttccagcagc cagcaaaaat
1621 ttacttcctg catgctacca gcatttgatg accaatgaag actcaccaat tatagaatat
1681 tacccacctg attttaaaac tgacctaaat gggaaacaac aggaatggga agctgtggtg
1741 ttaatccctt ttattgatga gaagcgatta ttggaagcca tggagacatg taaccactcc
1801 ctcaaaaagg aagagaggaa aagaaaccaa catagtgagt gcctaatgtg ctggtatgat
1861 agagacacag agtttatcta tccttctcca tggccagaaa agttccctgc catagaacga
1921 tgttgtacaa ggtataaaat aatatcctta gatgcttggc gtgtagacat aaacaaaaac
1981 aaaataacca gaattgacca gaaagcatta tatttctgtg gatttcctac tctgaaacac
2041 atcagacaca aatttttttt gaagaaaagt ggtgttcaag tattccagca aagcagtcgt
2101 ggagaaaaca tgatgttgga aatcttagtg gatgcagaat cagatgaact taccgtagaa
2161 aatgtagctt catcagtgct tggaaaatct gtctttgtta attggcctca ccttgaggaa
2221 gctagagtcg tggctgtatc agatggagaa actaagtttt acttggaaga acctccagga
2281 acacagaagc tttattcagg aagaactgcc ccaccatcta aagtggttca tcttggagat
2341 aaagaacaat ctaactgggc aaaagaagta caaggaattt cagaacacta cctgagaaga
2401 aaaggaataa taataaatga aacatctgca gttgtgtatg ctcagttact cacaggtcgt
2461 aaatatcaaa taaatcaaaa tggtgaagtt cgtctagaga aacagtggtc aaaacaagtt
2521 gttccttttg tttatcaaac tattgtcagg gacatccgag ctttcgactc ccgtttctcc
2581 aatatcaaaa cattggatga tttgtttcct ctgagaagta tggtctttat gctgggaact
2641 ccctattatg gctgcactgg agaagttcag gattcaggtg atgtgattac agaaggtagg
2701 attcgtgtga ttttcagcat tccatgtgaa cccaatcttg atgctttaat acagaaccag
2761 cataaatatt ctataaagta caacccagga tatgtgttgg ccagtcgcct tggagtgagt
2821 ggataccttg tttcaaggtt tacaggaagt atttttattg gaagaggatc taggagaaac
2881 cctcatggag accataaagc aaatgtgggt ttaaatctca aattcaacaa gaaaaatgag
2941 gaggtacctg gatatactaa gaaagttgga agtgaatgga tgtattcatc tgcagcagaa
3001 caacttctgg cagagtactt agagagagct ccagaactat ttagttatat agccaaaaat
3061 agccaagagg atgtgttcta tgaagatgac atttggcctg gagaaaatga gaatggtgct
3121 gaaaaagttc aagaaattat tacttggcta aaaggacatc ctgtcagtac tttatctcgt
3181 tcttcttgtg atttacaaat tctggatgca gctattgttg agaaaattga ggaagaagtc
3241 gaaaagtgca agcaaagaaa gaataataag aaggtgcgag taacagtgaa accccatttg
3301 ctatacagac ctttagaaca gcaacatgga gtcattcctg atcgggatgc agaattttgt
3361 ctttttgacc gtgttgtaaa tgtgagagaa aacttctcag ttccagttgg ccttcgaggc
3421 accatcatag gaataaaagg agctaataga gaagccgatg tactatttga agtattattt
3481 gatgaagaat ttcctggagg gttaacaata agatgctcac ctggtagagg ttatcgactg
3541 ccaacaagtg ccttggtgaa cctttctcat gggagtcgct ctgaaactgg aaatcagaag
3601 ttgacagcca tcgtaaaacc acaaccagct gtacatcaac atagctcaag ttcatcagtt
3661 tcctctgggc atttgggagc cctcaaccat tcccctcaat cactttttgt tcctactcaa
3721 gtacctacta aagatgatga tgaattctgc aacatttggc agtccttaca gggatctgga
3781 aagatgcaat actttcggcc aactatacaa gagaagggtg cagttctacc tcaagaaata
3841 agccaagtaa atcaacatca taaatctggc tttaatgaca acagtgttaa atatcagcaa
3901 agaaaacatg accctcacag aaaatttaaa gaagagtgta agagtcctaa agctgagtgt
3961 tggtcccaaa aaatgtccaa taagcagcct aactctggaa ttgagaactt tttagcatct
4021 ttgaatatct ccaaagaaaa tgaagtacag tcatctcatc atggggagcc tccaagtgaa
4081 gagcatttgt caccacagtc atttgccatg aagggaacac ggatgcttaa agaaattcta
4141 aaaattgatg gctctaacac tgtggaccat aagaatgaaa tcaaacagat tgctaatgaa
4201 atccctgttt cctctaacag aagagatgaa tatggattac cctctcagcc taaacaaaat
4261 aagaaattag catcttatat gaacaagcct cacagtgcta atgagtacca taatgttcag
4321 tctatggaca atatgtgttg gcctgccccc agccagatcc ctcctgtatc cacaccagta
4381 actgaacttt ctcgaatttg ttcccttgtt ggaatgccac aacctgattt ctcctttctt
4441 aggatgccac agacaatgac cgtttgccaa gtaaaattat ctaatggctt actggtacat
4501 gggccacagt gccactctga aaatgaagcc aaagagaaag ctgcactttt tgctttacaa
4561 cagttgggct ccttaggcat gaatttccct ttgccttcac aagtatttgc aaattatcct
4621 tcagctgtac cacctggaac cattcctcca gcctttcccc cacctactgc taatataatg
4681 ccttcgtcgt ctcatctctt tggctcaatg ccatggggac catcggtgcc agttcctggg
4741 aagcccttcc atcatacttt atattctggg accatgccca tggctggggg aataccaggg
4801 ggtgtgcaca atcagtttat acctctgcag gttactaaaa aaagggttgc aaacaaaaag
4861 aactttgaga ataaggaagc ccagagttct caagccactc cagttcagac tagccagcca
4921 gattcttcca acattgtcaa agtaagtcca cgggagagct catcagcttc tttgaagtcc
4981 tctccgattg ctcaacctgc atcttctttt caagttgaaa ctgcctctca aggccatagt
5041 atatctcacc ataagtcaac accaatccct tcttcaagaa gaaaatcaag aaaactggct
5101 gttaattttg gtgtttctaa accttctgag taaatttggc tcttagaatt aagttaattt
5161 cttctctttc catctacctt tttataaata catatctatg tctcataaaa attagaatgt
5221 actattttaa aataatatgt gtaaattgaa atttttttca tttttaagtt atcaggcact
5281 tttcatgctg tttaaaagac agtgtatcaa attgtgcact ttaagtatgt gcagtttgtt
5341 gtatgtcaat tatacctcaa taaatctgta ataaaaaact aaaaaaaaaa aaaaaaaaa
//