LOCUS CR749471 7033 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp781I1117 (from clone DKFZp781I1117).
ACCESSION CR749471
VERSION CR749471.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7033)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (17-AUG-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp781I1117) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp781I1117
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..7033
/db_xref="H-InvDB:HIT000306497"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="781 (synonym: hlcc4). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp781I1117"
/tissue_type="fetal kidney"
/note="ROD1 protein, differentially spliced"
/db_xref="taxon:9606"
CDS 111..1778
/codon_start=1
/gene="DKFZp781I1117"
/product="hypothetical protein"
/db_xref="GOA:O95758"
/db_xref="H-InvDB:HIT000306497.14"
/db_xref="HGNC:HGNC:10253"
/db_xref="InterPro:IPR000504"
/db_xref="InterPro:IPR006536"
/db_xref="InterPro:IPR012677"
/db_xref="InterPro:IPR021790"
/db_xref="InterPro:IPR033110"
/db_xref="InterPro:IPR034326"
/db_xref="InterPro:IPR034798"
/db_xref="InterPro:IPR035979"
/db_xref="UniProtKB/Swiss-Prot:O95758"
/protein_id="CAH18301.1"
/translation="MDGVVTDLITVGLKRGSDELLSSGIINGPFTMNSSTPSTGVYAN
GNDSKKFKRDRPPCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFL
EMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAV
QSGSLALSGGPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFT
KNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDF
TRLDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAVPGA
LGPLTITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFGVYGDVHRVK
IMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGL
TKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNLFIEAGCSVKAF
KFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI"
BASE COUNT 2072 a 1265 c 1289 g 2407 t
ORIGIN
1 ggcagagcca aagctcgctt gtccccggaa ccgccctgct gccgccgcct gcttcctctg
61 ctcgcggtta gcccgtcagt ccctgctctg tgcgcgcctc catctgggcc atggatggtg
121 ttgttacaga tcttataaca gtcggtttaa agcggggatc tgatgagctt ctttcttctg
181 gcatcattaa cggacctttt accatgaata gttctactcc ttctacaggt gtgtatgcta
241 atgggaatga cagcaagaaa tttaaacgag atagacctcc ctgttcgcct tcccgtgttc
301 tccatcttcg aaaaattcca tgtgatgtca ccgaagcaga gatcatatca ttaggtctac
361 catttggcaa agtaactaat cttttgatgt tgaaaggaaa aagccaggct ttcttagaaa
421 tggcttctga ggaagctgcc gttactatgg tgaattatta cactcctatt actcctcacc
481 ttcgaagcca gcctgtttat attcagtatt ccaatcacag agaacttaag actgacaatc
541 tacctaatca agctcgagcc caagctgcac tgcaggctgt cagtgccgtc caatcaggaa
601 gcctggccct ttctggaggt ccttccaatg aaggcacagt cctacctggg cagagccctg
661 tgcttcgaat aattattgaa aacctctttt accctgttac cctggaagtt cttcatcaga
721 tattttctaa atttggcaca gtcttgaaga ttatcacctt tacaaagaat aatcagtttc
781 aagccttgct tcagtatgct gacccagtaa atgcacatta tgccaaaatg gctctggatg
841 gccagaatat ctataatgca tgctgcactc tgcgcattga cttctccaag ctcaccagcc
901 ttaatgtgaa atataataat gacaaaagca gagacttcac tcgcttagac cttcctactg
961 gtgatggcca gccatccctt gaacccccta tggctgctgc ttttggtgca ccgggtataa
1021 tttcttcacc atatgcaggg gctgctggat ttgccccagc cattggattt cctcaagcta
1081 caggtctatc agttccagct gttcctggag ctcttggtcc tctcacaatc acctcttctg
1141 ctgtcactgg aaggatggcc attcctgggg ctagtggtat accaggaaat tctgttctac
1201 tcgtcacaaa tctcaatcct gatcttatca caccacatgg gctttttatc ctatttggag
1261 tctatggtga tgtacatcga gtgaagatta tgtttaataa gaaagaaaat gccttggttc
1321 agatggcgga tgcaaatcaa gctcagctag caatgaacca tctaagtggt cagagacttt
1381 atgggaaagt gcttcgtgct acactgtcca aacatcaagc agtacagctt cctcgagagg
1441 gacaagaaga ccaaggtctg actaaggatt tcagcaatag tcctttgcat cgctttaaaa
1501 agccgggctc taaaaacttc cagaatatct ttccaccatc agccactctg catctttcca
1561 acattccccc ttctgttaca gtggatgatc tgaagaacct tttcatagaa gctggatgtt
1621 cagtgaaggc ttttaaattc tttcagaaag atcgcaaaat ggcgctcatt caattgggat
1681 ctgtggaaga agcaattcag gccctcattg agcttcataa ccatgacctt ggagaaaatc
1741 accacctcag agtttccttc tcaaaatcta caatctgact tttctgtgaa tttttctcct
1801 aaaactggac cataatttca gtaaaacctt cagacataga ctgaagcagc tcaagaccaa
1861 ttttgcctct ttcacaaaaa taactctttc tgagtttgat attcaagtat attttaaaaa
1921 tcaagggttt tttttttttt tgtattcccc ctgcccccgc cagtcaaagg tttcttttcc
1981 ctttttacca tggtttctac aaaaataacc ttcaggaaaa agaaaatcag gaaaaaaatt
2041 ttttttcaat aatcttattc cctatattaa attagatttg aagaggatta acgttgtttt
2101 agtttgggtc cagatcagcc ttatacaaca tttctaaact catttgtact tttaaaaaat
2161 ttaaacacag acttctaaaa ttacttgatg taagtaattt aaatcactta tgaccaagtt
2221 attaacctta tgaatcagaa gtctgaccct tgtaggaaat tatattcaca tataaagtac
2281 atcagatctt tgccatatat tgatggttat tatgcataaa cacattgagt tgtgttggaa
2341 gcagatttat aaacctgcat gttttctttg aatgatttct ttttttcact gtaagacact
2401 cctttaaata atgcctgtct ttaacttttt aagactattt ggaaaaatgc agtgtctcag
2461 ctgtccccag ggaaattaag tggaattcaa ctaagatctg ttaataagat gtcagaataa
2521 ctaataattt tattaggaaa aaatcatgtt ttaaatttca aaatgacact tatttgtcaa
2581 gtaatatgat cttggaaaat tttaaagaaa aataatccta cttataaact acttttttat
2641 aattgttttc agaaaaaaag tttacagtct taaggaaaat attcaggtct atcatatggt
2701 ttgacagatt ttttaaaagt tatttttggt aaggtcttct tttagaaaaa aattaatctc
2761 aagggttttt gtaccactat aatctctaat acttactcag aattactgtg tatttactta
2821 atttcttatt atgtgcctta ttatgtgctt aagatacaat aggttagagt ttaatctaaa
2881 tatcttgaaa gctatattgt gggcttggta agcattttgt tttttctttc tctgttttgg
2941 taaggattta aaattttttt cattgcaatt ttaagtggtt ttcaataagt aatagttttt
3001 atcaaatttt tggtgcttgg tgcagagacg gtgtggggaa gggtgaatgg ttttgggaat
3061 aattcagtgc acacctgtag gcctctttac attgtgactg ataggggtta ttgcatatca
3121 atttggggct gtagagtgca atctcagttt catctttttc acccatcaga atttgtctca
3181 ggattacttg gtttttctca gtcctcaagc gagaacttgc ttttctttgt taatgtgact
3241 ttcattactg agtacccacg tatttggagt atgagaaggt gggttatttc tcatactctg
3301 tccctctctt tttcattgaa tgtaagagta cattttaatg ttgcttcagt gattgtataa
3361 tgtaaaattg tttcttttta ataagaaact ttgctattat ttcttcaatt gttgatcaga
3421 attttttaaa gcagaatttg tcaaaagggt catttttttg tctacccctt ttacactttt
3481 cagattctca aagtgtctca tctcaacttt taaaagaata aagaatatct tgctgggcat
3541 ggtggtgtgc gcctgtgcgc ctgtagtccc agctacaggc tgagcctgta ggcaggaggc
3601 tacaggcagg aggatcactt gagcccagga gttcaaggct gcagtgcgct atgatcacat
3661 ttgtgaatag ccacttcact ccagccctgg aacatagtgt gaccccttct cttaaaagta
3721 aaaattaaga aaatctcaat ctctttgctg tattccagtg attaatttga acatagggag
3781 gtttttacag aagaaatttt accaaaaaat agagactgca agagatgata cagattgttt
3841 aaaaagcaga attcactcac cactgagcaa cacttagttg gtagaataga aaggagggat
3901 actaagttaa gacttttcaa atggatcagt ttggctgaat agatagatat actcatgtat
3961 gtagttgtgg gagtttttag ttttttgttt ttttacttat gaaataagtt ttgacctaga
4021 cacaaggggt atatgaagga ggaaaaaaat ttctttgcaa aatctcccaa aacttgcttt
4081 tttttccctt ccacacaggc actattataa ttttcagtgc catgttaaat tggattattt
4141 catttacttt aagttaggaa ttactgtgta atttattaat tcatgattct cataacattc
4201 agcataagtg tagcaaagtt gctaataacg gaaggggatc atagtggtgt tgaatgtaac
4261 tttgaagtag ggaatggcct tttaagtctg ggagagaaca tttgaatcct tttcagggat
4321 ttgtgtaggg gtgtgtttgt gtgtgtgtgt gaatgtgtgt gtgtgtagat aagtgtatat
4381 acataaatac actcttctaa agttgtatat acatatgcac attacataca ttttaattta
4441 ttgacaaaat taaccaaatt aagatttgga gatgtgggat gttcttgttt taaaatagca
4501 tgtttgaaac catcagtttg tgtctaaaat tagctgtagc acatggatgt tgtccatatt
4561 aagctatttg ctgtttgaat tatagaggtc tacagtattt gtgttggcat agtttttgta
4621 aaaaaaagat taaaaaatat caggatggtg gaaaaactag atctgtgtat ctctgttttg
4681 gcatgcattt attcagtatc ttctagcaat ggtttttctc tgttgatctg ccgtagtatc
4741 ctatttttaa gtttatttta tttttaagga gtattgtcat cacttttcaa ggtgtcttga
4801 cttctacaca aagtatatat attcaggact ttaaaaaata gcagtacaca tttaacagta
4861 gcgaattaca ccaaaatgat ttactttgag atttgaataa tttgcatagc agtaaaatgt
4921 gttttgtgta acatacaaat agaaaaatga cccagtatct taattgatac ttactggaga
4981 gtatcagaat tacccagcag ctcttacaga atgccataaa ttctttaaga ctaaatattg
5041 aaatcaatta tttgaagtaa tgtttctgat ttactgttaa aagttgctga gctcagtttt
5101 tggagatatc atttatgcct gcctgttccc ttatgacagt gaggccttct ttggctccac
5161 ctagtatgat aatcatgggt tctgttttag ttgatgagaa gtggctccta tgaatgcctc
5221 tgctcaattt ctttttattt tactttattt tatttttagg ggtctcgcca actcctgggc
5281 tcaagtgatt ctcctgcttc cacctcccca cagtgctggg attacaggca tgagccacca
5341 cgcctggctc tctgttcttt tcagtgtctc cgtgccatca gtcagcagtg cttacatgtt
5401 tagcatattg tcatgcagtt tctcttctgt tcccacgaga tatttttgga caaaaaattg
5461 acaaaagtac atgtgttttt ccccacctat cccttagaaa acctaatgtg tactgctatt
5521 tttaaaacca aaaagagaca gcgtgacgat gcgtaaagca tttttcttag cctttccttt
5581 gtcttgatct gttaatgaga acaaaactgc cagactcaaa atactctact attgtgctga
5641 aagaaataca atttagattg cacaaaattt gaaaatataa ctcagctgtc ttttaaaaga
5701 gttgtgttgt tatctacaag actattagca gtcttttttc agagcaaatt ttaacagcta
5761 gttgtgagtg gtttaaaata tagaaaatta ttaaaatctt agtttgaggg gttttatagt
5821 gggagaaaaa acaggaccaa agtttatgtg ccttcttcag tagtcttaat tgaccttttc
5881 ttcctatttg agactaaagt agtatcagta ttctggtttt caggaaatat gtactatata
5941 gttttaaaag aatgttgtcc caccaactat tcatccaagc aaagaattgt aactataaat
6001 aaagtctcag ttacactttt gcctttatca cataatattc attgtagagc attgtgcagg
6061 tccaagaata gagctgctca aaatctttgt ggtagtttcc ttagtttttg taacctgagg
6121 catatgttcc agagaacagg gatatttgtc tggtccagtg accttggtga tcatagtcat
6181 aattgaaaga tgcctatggc atgcttaaat cagcattgtc aactgatttg ttgttgtatt
6241 attttcactt cttggatcta tgtagtagtt gtaataacaa atatttaaat agctattttt
6301 ttgatgccat taaaaaaatc atactctggc cttttttccc ccttactgtt gtttcccaga
6361 tcttttaaaa attcatccca tatccagaaa gtaccagtta taaagattgc tgaccaagca
6421 aagttttgca tcaaagtgtc acctcattgc tctgaccaaa gactgactgt tgtggtttta
6481 actcctctct gtaaagcatt ttgcattttc cccaagctcc tttctgaaag aagacccagt
6541 gcagagcggc ctttactttc aatttctact gctgaataga ctacttagag aaaatgtgag
6601 tttcagtgtg aacagaatgg attaggatga cgagtttgat gggcattttc agtactgtat
6661 ctaagaaaaa aaatagcaca gctaggagcc tctgacattg tctggtgttt tacgtggtct
6721 gttcatcaaa attccccttt tcagttttta agaatgttcg tctaacagaa gaaaatgctg
6781 taaatatttg taacaacatt ttttttaaca aggccaaaaa agaaaaaaag gtttttggga
6841 acaaatgaac ttataaagtg gttttatata aaacatcaat tgtcttgtat attttggata
6901 agcagcagta ccagctttca tttgtaacag tctgtggcat tggaaaaaaa ggagtctgtg
6961 attgttgaag tgaattatgt tataaatgca aagagaagat aaaatattaa aaaacaaaaa
7021 aaaaaaaaaa aca
//