LOCUS CR749458 4781 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp779M0721 (from clone DKFZp779M0721).
ACCESSION CR749458
VERSION CR749458.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4781)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (17-AUG-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp779M0721) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp779M0721
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4781
/db_xref="H-InvDB:HIT000306486"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="779 (synonym: hncc1). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp779M0721"
/tissue_type="liver"
/note="protein tyrosine phosphatase type IVA, member 1"
/db_xref="taxon:9606"
CDS 988..1509
/codon_start=1
/gene="DKFZp779M0721"
/product="hypothetical protein"
/db_xref="GOA:Q93096"
/db_xref="H-InvDB:HIT000306486.14"
/db_xref="HGNC:HGNC:9634"
/db_xref="InterPro:IPR000340"
/db_xref="InterPro:IPR000387"
/db_xref="InterPro:IPR003595"
/db_xref="InterPro:IPR029021"
/db_xref="PDB:1RXD"
/db_xref="PDB:1XM2"
/db_xref="PDB:5BX1"
/db_xref="UniProtKB/Swiss-Prot:Q93096"
/protein_id="CAH18292.1"
/translation="MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTT
IVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAV
HCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRF
KDSNGHRNNCCIQ"
BASE COUNT 1500 a 807 c 880 g 1594 t
ORIGIN
1 gaggacttga gttgccttgt ctggtatcct tatgcagaat gaactgaaat aatcatcaat
61 ctgaaaagct actcttaaac agagacttgc ttcaacacca ggaagaacat gaaagggtga
121 ctcataattc ccagcagcag tgctagttca tgtgctggga ttctgaccac aagtctaaca
181 atcaggtcag ggagtcagat ttctgttgga tttagaaaag catctatgtg tttatgaaag
241 aaacccactg gatttttaat agttctgcag ctcttggagg ctctacatct accctttctc
301 cccagccaag agcatggcta tgggagaagg aaggcaggca gcaggcagat tttccacagt
361 ttggcttctg gattcatgcc tctcaaatct tgaatctcct ctatgctcac atactaccag
421 taccagccac aggacctgct catggctgca tacatcctat gtatgggtca gcacagcaca
481 gtggatggta ggactatttc tggaagcctt ttctatacca aggcagctag ctgtacatgg
541 agcaattctg tggtgttctt ggtcacacat ttatggagtt tctgaagggc agtggagatt
601 actgccaggc acagcacgac ctctatgcag acaagtgaac tgtagaaact gattactgct
661 ccaccaagaa gcccccataa gagtggttat cctggacaca gaagtgttga attgaaatcc
721 acagagcatt ttacaagagt tctgacctgg atggggtaaa cctcagtgca cttcttttct
781 gttggcctca gtattactgg attgaagaat tgctgcttct tgttaggagg ttcatttcac
841 ttatcattac ttacaacttc atactcaaag cactgagaat ttcaagtgga gtatattgaa
901 gtagacttca gtttctttgc atcatttctg tattcaattt ttttaattat ttcataaccc
961 tattgagtgt tttttaacta aattaacatg gctcgaatga accgcccagc tcctgtggaa
1021 gtcacataca agaacatgag atttcttatt acacacaatc cgaccaatgc gaccttaaac
1081 aaatttatag aggaacttaa gaagtatgga gttaccacaa tagtaagagt atgtgaagca
1141 acttatgaca ctactcttgt ggagaaagaa ggtatccatg ttcttgattg gccttttgat
1201 gatggtgcac caccatccaa ccagattgtt gatgactggt taagtcttgt gaaaattaag
1261 tttcgtgaag aacctggttg ttgtattgct gttcattgcg ttgcaggcct tgggagagct
1321 ccagtacttg ttgccctagc attaattgaa ggtggaatga aatacgaaga tgcagtacaa
1381 ttcataagac aaaagcggcg tggagctttt aacagcaagc aacttctgta tttggagaag
1441 tatcgtccta aaatgcggct gcgtttcaaa gattccaacg gtcatagaaa caactgttgc
1501 attcaataaa attagggtgc ctaatgctac tggaagtgga acttgagata gggcctaatt
1561 tgttatacat attagccaac atgttggctt agtaagtcta atgaagcttc cataggagta
1621 ttgaaaggca gttttaccag gcctcaagct agacagattt ggcaacctct gtatttgggt
1681 tacagtcaac ctatttggat acttggcaaa agattcttgc tgtcagcata taaaatgtgc
1741 ttgtcatttg tatcaattga cctttcccca aatcatgcag tattgagtta tgacttgtta
1801 aatctattcc catgccagaa tcttatcaat acataagaaa tttaggaaga ttaggtgcca
1861 aaatacccaa cacaatactt gtatattttt agtaccatac agaagtaaaa tcccaggaac
1921 tatgaacact agaccttatg tggtttattc cttcaatcat ttcagacatt gaaagtaggg
1981 cctacatggt tatttgcctg ctcactttat gtttacatct cccacattca taccaatata
2041 cgtcaggttt gcttaaccat tgatttttct tttttttacc aagtcttaca gtgattattt
2101 tacgtgtttc catgtatctc actttgtgct gtattaaaaa aacctccatt ttgaaaatct
2161 acgttgtaca gaagcacatg tctttaatgt cttcagacaa aaaagcctta cattaattta
2221 atgtttgcac tctgaggtgc aacttaacag ggagggcctg agaaaagaat gggagggggc
2281 tattaattat ttttagcaaa atgttgcctt tgtcttgtgc aaacatgtag aatatgctct
2341 ttaatttagt aaaatatttt tttaaaaggt agagatgctt tgttattgta atcataaact
2401 tcctgaaatt cttgtaattt ttttcccata cttatcagaa gtgtgtttac caacttattt
2461 ttgtttgaaa gtgtgatttt ctttttcctt cccaacctct cttgcaaaaa aagaaatggg
2521 tttctgctaa tgaattgagc agacatctaa tattttatat gccttttgag ctgtgtaact
2581 taatatttgg atacttgaca atttgtttta ttatgtaatt gataaaatgg tgatgtgtat
2641 taatgttagt tcaaccatat atttatactg tctggggatg tgtggttata gttctgtggg
2701 agaaataatt ttgtcagtgt tcaccagctt gtaaaaactt agtgcgagag ctgaaacatc
2761 taaataaata atgacatgca tttatcatca ttgagattgg tttgcttaaa attaacttat
2821 tttgtagaag acaaaatgaa ttgcacttca cttaatgtgt gtcctcatct ttttacaaat
2881 aaatgaagga ttataaatga tgtcagcatt ttagtaaact tttagacaaa atttgttagg
2941 gtcattcatg aaaactttaa tactaaaagc actttccatt atatactttt taaaggtcta
3001 gataattttg aaccaattta ttattgtgta ctgaggagaa ataatgtata gtagaggaca
3061 gccttggttt gtaaagctca gttccactag ttcatggttt tgtgcaactt ctgagcctca
3121 gttttctcct ttgcaaatta ataattacat acctttatag attttgaaat taatttaaat
3181 attagtattt ggtacatgaa ggcttaatgt taagtttcct ttaatgatcc acaataatcc
3241 ctttgatcac gttaatctaa atctagatgt ctttgtctaa ttttttttga atagcagtta
3301 taaatgtaaa ggactcaaag tttaagtaaa aagtgatact ccaccttgtg tttcaaagaa
3361 tttagttcca cctcttcata ccagtttaac acttaatata tttcattgga ttttagacag
3421 ggcaaaagga agaacagggg cctctggagg cccttggtta tttaaatctt ggattatttg
3481 tgatagtaat cacaaatttt tggctaattt ttaacctgag gttttgtttt ttttttaaag
3541 gaaatgcagc ctagtcttga gaacataatt ttatataatc aattactaaa tgttaaacta
3601 ttaccacaca gcccataaaa cagcatttgc gtttattgag agagaggatg tgccatcatg
3661 attaatgaaa actatctttt gagtttgaaa agaaattaat ttgcagtgtt tggattgtat
3721 atatggtgct aaaaataaat taatttactt tataaacctt atctgtacat tatacgatgt
3781 gatgaaattt gctttttatc caaatatttt gtatcttgta aatatggcta attataggaa
3841 tgcctataat acatcttaga ttccttatat ctaataagag ttcaaagagt tatgagttga
3901 agtcttgaat gcaggaaact atctgatggt gttctaaaat ttggttactt gggtttggat
3961 acccttagtg ggatgatgta aatagaggct ggctacctag gcttgtctat agcaaccata
4021 atgttgatgt aagtaatgcg gttactgaat cataagaaaa tgccatctct ttttagttga
4081 aggaaaactc tggaagtagg tgccattggt cattctgcgg tgcactgcaa ccattgtttc
4141 ccctagtgcc ctcttttccc tagggcattg ctctcctatt cccacgcctt aacacagctc
4201 tatacctaga agcagccagc ccaggcatgc agtcacattt aatcacatcc cccttctaga
4261 gtgcttcaaa atgatgtagt ccctcaactt ggctaaagaa tctcaatctc ttgaaattta
4321 tttttttaat gtcatattca tctggtaaat atctactgtt tgccaggcat ttaagaatat
4381 ggcaaagaac ataaaagatg gtgtcaccag attttggcca ccaatgagta cccgacccgt
4441 tgccatgatt aagagaggat gctttctatt ggagtttcag gaaatataat ttgagaatac
4501 tttaaaggga agtggaagta taagtgaatg acatttttct tttacatgta aacaatgaag
4561 ttatttcaaa gttaagtttt aaacaaaata catgaagtag tgtctgccat acatgttaat
4621 attctacatt cttgcttcct taaattaata tgtttgtgtg tatatatgtg cctcacacct
4681 gaattgaaaa ttaaagactg gtttaaaagt gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4741 aaaaaaaaaa aaaaaaaaag aaaaaaaaaa aaaaaaaaac a
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