LOCUS CR749359 3597 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686E02211 (from clone DKFZp686E02211).
ACCESSION CR749359
VERSION CR749359.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3597)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (17-AUG-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp686E02211) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686E02211
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3597
/db_xref="H-InvDB:HIT000306396"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686E02211"
/tissue_type="rectum tumor"
/note="transmembrane channel-like protein 5, N-terminus
truncated, differentially spliced"
/db_xref="taxon:9606"
CDS <2..2425
/codon_start=1
/gene="DKFZp686E02211"
/product="hypothetical protein"
/db_xref="GOA:Q6UXY8"
/db_xref="H-InvDB:HIT000306396.13"
/db_xref="HGNC:HGNC:22999"
/db_xref="InterPro:IPR012496"
/db_xref="InterPro:IPR038900"
/db_xref="UniProtKB/Swiss-Prot:Q6UXY8"
/protein_id="CAH18212.1"
/translation="DSLGKPDYPGADIQPNSPPFFGEPDYPSAEDNQNLPSTWREPDY
SDAENGHDYGSSETPKMTRGVLSRTSSIQPSFRHRSDDPVGSLWGENDYPEGIEMASM
EMANSYGHSLPGAPGSGYVNPAYVGESGPVHAYGNPPLSECDWHKSPQGQKLIASLIP
MTSRDRIKAIRNQPRTMEEKRNLRKIVDKEKSKQTHRILQLNCCIQCLNSISRAYRRS
KDSLSEILNSISLWQKTLKIIGGKFGTSVLSYFNFLRWLLKFNIFSFILNFSFIIIPQ
FTVAKKNTLQFTGLEFFTGVGYFRDTVMYYGFYTNSTIQHGNSGASYNMQLAYIFTIG
ACLTTCFFSLLFSMAKYFRNNFINPHIYSGGITKLIFCWDFTVTHEKAVKLKQKNLST
EIRENLSELRQENSKLTFNQLLTRFSAYMVAWVVSTGVAIACCAAVYYLAEYNLEFLK
THSNPGAVLLLPFVVSCINLAVPCIYSMFRLVERYEMPRHEVYVLLIRNIFLKISIIG
ILCYYWLNTVALSGEECWETLIGQDIYRLLLMDFVFSLVNSFLGEFLRRIIGMQLITS
LGLQEFDIARNVLELIYAQTLVWIGIFFCPLLPFIQMIMLFIMFYSKNISLMMNFQPP
SKAWRASQMMTFFIFLLFFPSFTGVLCTLAITIWRLKPSADCGPFRGLPLFIHSIYSW
IDTLSTRPGYLWVVWIYRNLIGSVHFFFILTLIVLIITYLYWQITEGRKIMIRLLHEQ
IINEGKDKMFLIEKLIKLQDMEKKANPSSLVLERREVEQQGFLHLGEHDGSLDLRSRR
SVQEGNPRA"
BASE COUNT 1008 a 822 c 819 g 948 t
ORIGIN
1 agactctctg ggaaagcctg attatccagg cgctgacatt caacctaact ctccaccctt
61 ttttggggag ccagactatc ccagtgctga ggacaatcag aacttgccaa gcacttggag
121 agaacctgat tattcagatg ctgagaatgg tcatgattat ggctcttctg agaccccaaa
181 gatgaccagg ggggtgctca gcagaacatc ttcaatccag ccctcatttc gtcacaggag
241 tgatgacccc gtgggcagtc tttggggaga gaatgattac cctgaaggca ttgaaatggc
301 atccatggag atggcaaact catatggcca ctctctgcca ggtgctcctg gaagtggcta
361 tgtgaaccct gcttatgtag gtgaaagtgg tcctgtccat gcttatggaa acccaccatt
421 gtctgaatgt gattggcaca agtcacccca aggacagaag ttaatcgcat cccttatacc
481 catgacatcc agagacagaa ttaaagccat caggaaccag ccaaggacca tggaagagaa
541 aaggaacctt aggaaaatag ttgacaaaga aaaaagcaaa cagacccatc gtatccttca
601 gctcaattgc tgtattcagt gtctgaactc catttcccgg gcttatcgga gatccaagga
661 cagcctgtcg gaaattctga attccatcag cctgtggcag aagacgctga agatcattgg
721 aggcaagttt ggaaccagcg tcctctccta tttcaacttt ctgagatggc ttttgaagtt
781 caacattttc tcattcatcc tgaacttcag cttcatcata atccctcagt ttaccgtggc
841 caaaaagaac accctccagt tcactgggct ggagtttttc actggggtgg gttattttag
901 ggacacagtg atgtactatg gcttttacac caattccacc atccagcacg ggaacagcgg
961 ggcatcctac aacatgcagc tggcctacat cttcacaatc ggagcatgct tgaccacctg
1021 cttcttcagt ttgctgttca gcatggccaa gtatttccgg aacaacttca ttaatcccca
1081 catttactcc ggagggatca ccaagctgat cttttgctgg gacttcactg tcactcatga
1141 aaaagctgtg aagctaaaac agaagaatct tagcactgag ataagggaga acctgtcaga
1201 gctccgtcag gagaattcca agttgacgtt caatcagctg ctgacccgct tctctgccta
1261 catggtagcc tgggttgtct ctacaggagt ggccatagcc tgctgtgcag ccgtttatta
1321 cctggctgag tacaacttag agttcctgaa gacacacagt aaccctgggg cggtgctgtt
1381 actgcctttc gttgtgtcct gcattaatct ggccgtgcca tgcatctact ccatgttcag
1441 gcttgtggag aggtacgaga tgccacggca cgaagtctac gttctcctga tccgaaacat
1501 ctttttgaaa atatcaatca ttggcattct ttgttactat tggctcaaca ccgtggccct
1561 gtctggtgaa gagtgttggg aaaccctcat tggccaggac atctaccggc tccttctgat
1621 ggattttgtg ttctctttag tcaattcctt cctgggggag tttctgagga gaatcattgg
1681 gatgcaactg atcacaagtc ttggccttca ggagtttgac attgccagga acgttctaga
1741 actgatctat gcacaaactc tggtgtggat tggcatcttc ttctgccccc tgctgccctt
1801 tatccaaatg attatgcttt tcatcatgtt ctactccaaa aatatcagcc tgatgatgaa
1861 tttccagcct ccgagcaaag cctggcgggc ctcacagatg atgactttct tcatcttctt
1921 gctctttttc ccatccttca ccggggtctt gtgcaccctg gccatcacca tctggagatt
1981 gaagccttca gctgactgtg gcccttttcg aggtctgcct ctcttcattc actccatcta
2041 cagctggatc gacaccctaa gtacacggcc tggctacctg tgggtagttt ggatctatcg
2101 gaacctcatt ggaagtgtgc acttcttttt catcctcacc ctcattgtgc taatcatcac
2161 ctatctttac tggcagatca cagagggaag gaagattatg ataaggctgc tccatgagca
2221 gatcattaat gagggcaaag ataaaatgtt cctgatagaa aaattgatca agctgcagga
2281 tatggagaag aaagcaaacc ccagctcact tgttctggaa aggagagagg tggagcaaca
2341 aggctttttg catttggggg aacatgatgg cagtcttgac ttgcgatcta gaagatcagt
2401 tcaagaaggt aatccaaggg cctgatgact cttttggtaa ccagacacca atcaaataag
2461 gggaggagac gaaaatggaa tgatttcttc catgccacct gtgcctttag gaactgccca
2521 gaagaaaatc caaggcttta gccaggagcg gaaactgact accatgtaat tatcaaagta
2581 aaattgggca ttccatgcta tttttaatac ctggattgct gatttttcaa gacaaaatac
2641 ttggggtttt ccaataaaga ttgttgtaat attgaaatga gcctacaaaa acctaggaag
2701 agataactag ggaataatgt atattatctt caagaagtgt gtgcaggaat gattggttct
2761 tagaaatctc tcctgccaga cttcccagac ctggcaaagg tttagaaact gttgctaaga
2821 aaagtggtcc atcctgaata aatatgtaat actccagcag ggatatgaag cctctgaatt
2881 gtagaacctg catttatttg tgactttgaa ctaaagacat cccccatgtc ccaaaggtgg
2941 aatacaacca gaggtctcat ctctgaactt tcttgcgtac tgattacatg agtctttgga
3001 gtcggggatg gaggaggttc tgcccctgtg aggtgttata catgaccatc aaagtcctac
3061 gtcaagctag ctttgcagtg gcagtaccgt agccaatgag atttatccga gacgcgatta
3121 ttgctaattg gaaattttcc caatacccca ccgtgatgac ttgaaatata atcggcgctg
3181 gcaatttttg acagtctcta cggagactga ataagaaaaa agaaaagaaa agaaattagc
3241 tgggtgcgat ggcttatgcc tgtaatcccg gcactttggg aggctgaggc aagcggatca
3301 cttaatgtca ggagttcaag accagcctgg ccaacatggt gaaaccccgt ctctactaaa
3361 aataaaaaaa ctagctgggc gtggtggtac atgcctataa tcccagctac tcgggaggct
3421 gaggcaggag aattgcttga acctgggagg cagaggttgc agtgaggcga gattgtacca
3481 ctgcattcca gcctgggcaa cagtgagact ctgcctcaaa aaaataaata aataaataaa
3541 taaagtaaat taaaagtctt attcaaacca aaaaaaagaa aaaaaaaaaa aaaaaaa
//