LOCUS CR749241 4804 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp781J0262 (from clone DKFZp781J0262).
ACCESSION CR749241
VERSION CR749241.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4804)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (17-AUG-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp781J0262) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp781J0262
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4804
/db_xref="H-InvDB:HIT000306281"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="781 (synonym: hlcc4). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp781J0262"
/tissue_type="retina"
/note="FERM and PDZ domain containing 2, differentially
spliced"
/db_xref="taxon:9606"
CDS 304..4233
/codon_start=1
/gene="DKFZp781J0262"
/product="hypothetical protein"
/db_xref="GOA:Q68DX3"
/db_xref="H-InvDB:HIT000306281.13"
/db_xref="HGNC:HGNC:28572"
/db_xref="InterPro:IPR000299"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR011019"
/db_xref="InterPro:IPR011993"
/db_xref="InterPro:IPR014352"
/db_xref="InterPro:IPR018979"
/db_xref="InterPro:IPR018980"
/db_xref="InterPro:IPR019748"
/db_xref="InterPro:IPR019749"
/db_xref="InterPro:IPR029071"
/db_xref="InterPro:IPR029906"
/db_xref="InterPro:IPR035963"
/db_xref="InterPro:IPR036034"
/db_xref="UniProtKB/Swiss-Prot:Q68DX3"
/protein_id="CAH18097.1"
/translation="MQPLTKDAGMSLSSVTLASALQVRGEALSEEEIWSLLFLAAEQL
LEDLRNDSSDYVVCPWSALLSAAGSLSFQGRVSHIEAAPFKAPELLQGQSEDEQPDAS
QMHVYSLGMTLYWSAGFHVPPHQPLQLCEPLHSILLTMCEDQPHRRCTLQSVLEACRV
HEKEVSVYPAPAGLHIRRLVGLVLGTISEVEKRVVEESSSVQQNRSYLLRKRLRGTSS
ESPAAQAPECLHPCRVSERSTETQSSPEPHWSTLTHSHCSLLVNRALPGADPQDQQAG
RRLSSGSVHSAADSSWPTTPSQRGFLQRRSKFSRPEFILLAGEAPMTLHLPGSVVTKK
GKSYLALRDLCVVLLNGQHLEVKCDVESTVGAVFNAVTSFANLEELTYFGLAYMKSKE
FFFLDSETRLCKIAPEGWREQPQKTSMNTFTLFLRIKFFVSHYGLLQHSLTRHQFYLQ
LRKDILEERLYCNEEILLQLGVLALQAEFGNYPKEQVESKPYFHVEDYIPASLIERMT
ALRVQVEVSEMHRLSSALWGEDAELKFLRVTQQLPEYGVLVHQVFSEKRRPEEEMALG
ICAKGVIVYEVKNNSRIAMLRFQWRETGKISTYQEKFTITSSVTGKKHTFVTDSAKTG
KYLLDLCSAQHGFNAQMGSGQPSHVLFDHDKFVQMANLSPAHQARSKPLIWIQRLSCS
ENELFVSRLQGAAGGLLSTSMDNFNVDGSKEAGAEGIGRSPCTGREQLKSACVIQKPM
TWDSLSGPPVQSMHAGSKNNRRKSFIAEPGREIVRVTLKRDPHRGFGFVINEGEYSGQ
ADPGIFISSIIPGGPAEKAKTIKPGGQTLALNHISLEGFTFNMAVRMIQNSPDNIELI
ISQSKGVGGNNPDEEKNSTANSGVSSTDILSFGYQGSLLSHTQDQDRNTEELDMAGVQ
SLVPRLRHQLSFLPLKGAGSSCPPSPPEISAGEIYFVELVKEDGTLGFSVTGGINTSV
PYGGIYVKSIVPGGPAAKEGQILQGDRLLQVDGVILCGLTHKQAVQCLKGPGQVARLV
LERRVPRSTQQCPSANDSMGDERTAVSLVTALPGRPSSCVSVTDGPKFEVKLKKNANG
LGFSFVQMEKESCSHLKSDLVRIKRLFPGQPAEENGAIAAGDIILAVNGRSTEGLIFQ
EVLHLLRGAPQEVTLLLCRPPPGALPELEQEWQTPELSADKEFTRATCTDSCTSPILD
QEDSWRDSASPDAGEGLGLRPESSQKAIREAQWGQNRERPWASSLTHSPESHPHLCKL
HQERDESTLATSLEKDVRQNCYSVCDIMRLGRYSFSSPLTRLSTDIF"
BASE COUNT 1219 a 1178 c 1289 g 1118 t
ORIGIN
1 gagctcttcc tggctctctc acgggtcact ggctttgagg acgcaggctg ctggggtggc
61 agtgcctgct aacaggccag agactgcgca ggacccaggg aatgagagtg gtggcaggaa
121 agggaagggg ccttgttgac tcactcgctg ggcagcaagt gcttagtgac aagcagtaaa
181 caaagacagc ggcaacagtg ctggtggcag ggagctccgc ggacagactt gcaagagacc
241 cctgctcctt gttggaaagt tgtcccatga tgaaggccta gacctggtca cggagacttt
301 tggatgcagc ctttaacgaa ggacgcaggc atgagcctgt cctctgtgac gctggccagc
361 gccctacagg tcaggggtga agctctgtct gaggaggaaa tctggtccct cctgttcctg
421 gccgctgagc agctcctgga agacctccgc aacgattcct cggactatgt ggtttgcccc
481 tggtcagccc tgctttctgc agctggaagc ctttctttcc aaggccgtgt ttctcatata
541 gaggctgctc ctttcaaggc ccctgaactg ctacagggac agagtgagga tgagcagcct
601 gatgcatctc agatgcatgt ctattcttta ggaatgaccc tctactggtc agcagggttt
661 catgttccgc cacatcagcc cctgcagctc tgcgagcccc tgcactccat cctgctgacc
721 atgtgtgaag accagcctca caggcggtgc acgttgcagt cggttctgga agcttgtcgg
781 gttcatgaga aagaagtgtc tgtctaccca gcccctgctg gtctccacat cagaaggctg
841 gttggcttgg ttctgggtac catttctgag gtggagaaaa gagttgtgga ggaaagctcc
901 tctgtgcagc agaacagaag ctacctgctc aggaagaggc tgcgtgggac aagcagcgag
961 agcccagcgg cacaggcccc ggagtgtctg catccttgca gagtttcaga aagaagcacg
1021 gagacccaga gctcaccaga gccccattgg agcaccttga cacacagtca ctgcagcctc
1081 cttgttaacc gcgctcttcc aggagcagat ccccaggacc agcaggcggg ccggaggctc
1141 agctctggat ctgtgcactc ggcagcagac agctcatggc caacaactcc ttctcagagg
1201 ggttttctgc aaagaaggag caagttttcc aggccagagt tcatcctgtt ggctggagag
1261 gccccgatga cactacatct gccgggatcg gttgtgacca aaaaagggaa atcctatttg
1321 gctctcaggg acctctgtgt ggtcctgctg aacgggcagc acctggaggt aaaatgtgat
1381 gttgaatcaa cagtgggagc tgtcttcaat gccgtgacat cctttgccaa cctcgaggaa
1441 ctcacctact ttggcttggc gtatatgaaa agcaaagagt tctttttcct ggacagtgaa
1501 accagattgt gcaaaatagc tcctgaaggc tggagagagc agcctcagaa gacctccatg
1561 aataccttca cactcttcct gaggataaag ttctttgtca gccactatgg gctgctccag
1621 cacagcctga caaggcacca gttttacctg cagcttcgga aagatatcct ggaggagagg
1681 ctgtactgca atgaagagat actgctgcag ctgggggtcc ttgccttgca ggctgagttt
1741 ggcaattacc ctaaggagca ggtggagagt aagccatact ttcacgttga agactacatc
1801 ccagcgagtc tgatcgagag gatgaccgct ctacgggtcc aggttgaagt ctcagagatg
1861 caccggctca gctctgcact gtggggagag gatgctgagc tgaagttctt gagggtcact
1921 cagcagctcc cagaatacgg tgtgctggtt caccaagtat tctcagagaa gaggaggcca
1981 gaagaggaga tggccctggg gatctgtgcc aagggtgtca tagtctatga agtgaaaaac
2041 aacagcagaa ttgcaatgtt acggtttcag tggagagaaa ccgggaagat ttctacttat
2101 caagaaaagt tcaccatcac aagcagtgtc actgggaaga agcacacatt tgtcacagat
2161 tcagccaaga ccggtaaata cttactggac ctctgctcag cccagcatgg gtttaatgca
2221 cagatgggct ctgggcagcc ttcccatgtt ttatttgacc atgataagtt tgtgcaaatg
2281 gccaatttga gtcctgcaca ccaggcccgg tctaagcctc tcatttggat tcagagattg
2341 tcatgctcag aaaacgagtt gtttgtatcc aggcttcagg gtgctgcagg aggcctgctg
2401 agtacatcaa tggataactt caacgtggac ggcagcaagg aggctggagc agaaggcatc
2461 gggcgcagcc cctgcactgg ccgggagcag ctgaagagtg cctgtgtgat ccagaagcca
2521 atgacctggg actctctctc tggaccacct gttcagagca tgcatgcagg ctcaaagaat
2581 aataggagga agagctttat agctgaaccg ggccgagaaa ttgtacgtgt gacactgaaa
2641 cgtgacccac atcgtggttt tgggtttgtc attaatgagg gagagtattc aggccaagct
2701 gaccctggca tttttatatc ttctattata cctggaggac cagcagaaaa agcaaaaacg
2761 atcaaaccag gagggcagac actagccctg aatcacatca gtctggaggg cttcacattc
2821 aacatggctg ttaggatgat ccagaattcc cctgacaaca tagaattaat tatttctcag
2881 tcaaaaggtg ttggtggaaa taacccagat gaagaaaaga atagcacagc caattctggg
2941 gtctcctcta cagacatcct gagcttcggg taccagggaa gtttgttgtc acacacacaa
3001 gaccaggaca gaaatactga agaactagac atggctgggg tgcagagctt agtgcccagg
3061 ctgagacatc agctttcctt tctgccgtta aagggtgctg gttcttcttg tcctccatca
3121 cctccagaaa tcagtgctgg tgaaatctac tttgtggaac tggttaaaga agatgggaca
3181 cttggattca gtgtaactgg tggcattaac accagtgtgc catatggtgg tatctatgtg
3241 aaatccattg ttcctggagg accagctgcc aaggaagggc agatcctaca gggtgaccga
3301 ctcctgcagg tggatggagt gattctgtgc ggcctcaccc acaagcaggc tgtgcagtgc
3361 ctgaagggtc ctgggcaggt tgcaagactg gtcttagaga gaagagtccc caggagtaca
3421 cagcagtgtc cttctgctaa tgacagcatg ggagatgaac gcacggctgt ttccttggta
3481 acagccttgc ctggcaggcc ttcgagctgt gtctcagtga cagatggtcc taagtttgaa
3541 gtcaaactaa aaaagaatgc caatggtttg ggattcagtt tcgtgcagat ggagaaagag
3601 agctgcagcc atctcaaaag tgatcttgtg aggattaaga ggctctttcc ggggcagcca
3661 gctgaggaga atggggccat tgcagctggt gacattatcc tggccgtgaa tggaaggtcc
3721 acggaaggcc tcatcttcca ggaggtgctg catttactga gaggggcccc acaggaagtc
3781 acgctcctcc tttgccgacc ccctccaggt gcgctgcctg agctggagca ggaatggcag
3841 acacctgaac tctcagctga caaagaattc accagggcaa catgtactga ctcatgtacc
3901 agccccatcc tggatcaaga ggacagctgg agggacagtg cctccccaga tgcaggggaa
3961 ggcctgggtc tcaggccaga gtcttcccaa aaggccatca gagaggcaca atggggccaa
4021 aacagagaga gaccttgggc cagttccttg acacattctc ctgagtccca ccctcattta
4081 tgcaaacttc accaagaaag ggatgaatca acattggcga cctctttgga aaaggatgtg
4141 aggcaaaact gctattcagt ttgtgatatc atgagacttg gaagatattc cttctcatct
4201 cctctaacca gactttcgac agatattttc tgagcacctt ctctgcatgt ctgcagtgct
4261 gtgtaaaatg ccctaccttt gcatggacta ttctttctaa tcaagaggcg tgtgtggcga
4321 acttggggca gcccctggaa gtcttgttct ttgaccatta cgtctgcggc tgcatcacca
4381 gataatgagc ttcaccactc gtctgcctcc tgtgtccttc cgcggggagt aaatgtcact
4441 tcagcttgcc gcatctctaa ataggcaaat tttcagtgct cagaaaagga cctgatcttt
4501 gcacaaagtg ctttgatggt tgcctgcttg agtcactccc aatcccttcc tgaagccctt
4561 tctttataat tcttctgttg aaatagccat catattcaca gtactaatca cagcatctca
4621 catttactaa aaacttaccc cataccagga acccagagtt gggggggctg tgtcagaatt
4681 atgtaattta cgtgtcccaa taatcctaga cgcttcttga ccatctagtt ttgtcaaatg
4741 agaaaactga ggttccaaag aagtcaataa acttgtccaa agtcaaaaaa aaaaaaaaaa
4801 aaaa
//