LOCUS CR627427 6610 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686O238 (from clone DKFZp686O238).
ACCESSION CR627427
VERSION CR627427.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6610)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany)
within the cDNA sequencing consortium of the German Genome Project.
This clone (DKFZp686O238) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686O238
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..6610
/db_xref="H-InvDB:HIT000306195"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686O238"
/tissue_type="cervix"
/note="GTPase-activating protein GARNL4, differentially
spliced"
/db_xref="taxon:9606"
CDS 60..2207
/codon_start=1
/gene="DKFZp686O238"
/product="hypothetical protein"
/db_xref="GOA:Q684P5"
/db_xref="H-InvDB:HIT000306195.12"
/db_xref="HGNC:HGNC:29176"
/db_xref="InterPro:IPR000331"
/db_xref="InterPro:IPR035974"
/db_xref="UniProtKB/Swiss-Prot:Q684P5"
/protein_id="CAH10514.1"
/translation="MFGRKRSVSFGGFGWIDKTMLASLKVKKQELANSSDATLPDRPL
SPPLTAPPTMKSSEFFEMLEKMQDDYIPYPSIDEVVEKGGPYPQVILPQFGGYWIEDP
ENVGTPTSLGSSICEEEEEDNLSPNTFGYKLECKGEARAYRRHFLGKDHLNFYCTGSS
LGNLILSVKCEEAEGIEYLRVILRSKLKTVHERIPLAGLSKLPSVPQIAKAFCDDAVG
LRFNPVLYPKASQMIVSYDEHEVNNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFL
DLLGDTITLQDFKGFRGGLDVTHGQTGVESVYTTFRDREIMFHVSTKLPFTDGDAQQL
QRKRHIGNDIVAIIFQEENTPFVPDMIASNFLHAYIVVQVETPGTETPSYKVSVTARE
DVPTFGPPLPSPPVFQKGPEFREFLLTKLTNAENACCKSDKFAKLEDRTRAALLDNLH
DELHAHTQAMLGLGPEEDKFENGGHGGFLESFKRAIRVRSHSMETMVGGQKKSHSGGI
PGSLSGGISHNSMEVTKTTFSPPVVAATVKNQSRSPIKRRSGLFPRLHTGSEGQGDSR
ARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEICPNKEKPFMKLKENGRAISRSSS
STSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFVYSPSPSSESPSLGAAATPIIM
SRSPTDAKSRNSPRSNLKFRFDKLSHASPGAGH"
BASE COUNT 1424 a 1853 c 1839 g 1494 t
ORIGIN
1 gacagccccg gggacgtcgt tgggacatcg ctgggacccc gggctctgca gccacaacca
61 tgtttggccg gaagcgcagt gtctcctttg ggggcttcgg atggatcgac aagaccatgc
121 tggcaagtct gaaggtcaag aagcaggagc tggccaacag ctcggatgcg accctcccag
181 accggccgct ctcccctcct ctcacggcac ctcccaccat gaagtcgtcg gagttctttg
241 agatgctgga gaaaatgcag gacgactata tcccataccc cagcatcgac gaggttgtgg
301 agaagggagg cccgtaccct caggtcatcc tgccacagtt tgggggctat tggatcgagg
361 acccggagaa cgtgggcacc ccaacatcgc tggggagcag catctgtgag gaggaggaag
421 aggacaacct cagccccaac acatttggct acaagctcga gtgcaagggt gaagccaggg
481 cctaccggag gcacttcctg gggaaggatc atctaaactt ttactgtacc ggcagcagcc
541 tggggaactt gatcctgtcc gtcaagtgcg aggaagcaga ggggatcgag tacctccggg
601 tcatcctcag gtccaaactg aagacggtac atgagcggat ccccttggct ggactgagca
661 agcttcccag tgtccctcag attgcaaagg ctttctgtga tgatgcagtg ggactgagat
721 tcaatcctgt cctgtacccc aaggcctccc aaatgattgt gtcctatgat gagcatgaag
781 tcaacaacac attcaaattc ggagtcattt atcaaaaagc caggcagacc ctggaggagg
841 agctatttgg gaacaatgag gagagcccag cttttaagga gttcttggac ctgctggggg
901 acacgatcac actgcaggat ttcaaaggtt tccgaggagg cctggacgtg acccacggac
961 agacaggggt ggaatcagtg tacacaacat tccgggacag ggagatcatg tttcacgttt
1021 ccacaaagct gccatttacc gacggagacg cccagcagct ccagagaaag agacacattg
1081 gaaatgacat cgtggccatc atcttccaag aggaaaacac gccgtttgtc ccagacatga
1141 tagcctccaa tttcttacat gcctacatcg tcgtgcaggt cgagacccca ggcacagaga
1201 ccccatccta caaggtctct gtcactgcgc gggaagatgt gcccaccttt ggtccacctc
1261 tgcccagtcc ccccgttttc cagaagggcc cggaattcag ggagtttctg ctcaccaagc
1321 tcaccaatgc cgagaacgcc tgctgcaagt cggacaagtt tgcaaagctg gaggaccgga
1381 ccagggctgc cctcctggac aaccttcacg atgagctcca cgcccacaca caggccatgc
1441 tgggactggg cccagaggag gacaagtttg agaatggagg ccacgggggg ttcctggagt
1501 cttttaagag ggccatccgc gtacgcagcc actccatgga gaccatggtg ggcggccaga
1561 agaagtcgca cagtgggggc atccctggca gcctcagcgg gggcatctcc cacaacagca
1621 tggaggtcac caagaccacc ttctcgcctc cagtggtggc ggcaacggtg aagaaccagt
1681 cacggagtcc catcaagcga cgctcggggc tcttcccccg cctgcacacg ggctcagaag
1741 gccagggcga cagccgggca cgatgtgaca gcacatccag cacacccaag accccagatg
1801 gtggacactc ctctcaggag ataaagtctg agacctcatc caatcccagc tctccagaaa
1861 tctgccccaa caaggagaag cccttcatga agttgaagga aaacggccgc gccatctccc
1921 gctcctcctc cagcaccagc agcgtcagca gcactgcagg ggagggcgag gccatggagg
1981 agggcgacag tgggggcagc cagccgtcca cgacctcacc cttcaagcag gaggtgtttg
2041 tctacagccc gtccccgagc agcgagagcc ccagcctggg ggcagctgcc accccaatca
2101 tcatgagccg gagtcccaca gatgccaaaa gcagaaactc cccgagatcg aacctgaaat
2161 tccgctttga caagctcagc catgccagcc ctggtgcggg tcactaatgt gaaagtggag
2221 tccttcgcct gtccaaggga atcccctctt ctgtcctgga aaaggctcct gtaccagcag
2281 tttgggagtg ccgtccacga ccctgacagt cccagccctg ctgccccatg gccacgtgcc
2341 cacagatgtg ctgttggtcc aggtgtccca gtctggccac agccctgcct ccgccctcac
2401 ctacatgccc tcccagcccc tcccatctct ggacgaggcc tccttcctca ggttcctcct
2461 gctcctgacc tcccagtgtg atgtccgggt cctttatcat cctattcatc ctggagagga
2521 aaagtgtcgg gcaaaggggg atctgggggg agctcagcag tgactgggga gctggtctgc
2581 ctcagagaca gagtaggggg tgggagcaga gcctcggtga gggtcttggc cacagggcag
2641 tgccttcctg aacgtggcag gctttactac caggaacgca ctcggtggtg gaggccccat
2701 gttcccagga gccaagattc gtagcatcct tgaggccatc ctgataaaat tcggcgctat
2761 tgcccccgta gctctggagc tctaaaccgt ctatctgctt ctgtgctgaa cgcctttccc
2821 atctgctgac gtaggcccag ggctgccctg cccctgctgc cagtgtaccg tgagcggggc
2881 tccagccagt tcaagctcag agccagagct ggacgggcca gaactgcgct gcacacttcc
2941 tggactgagg cggggtactt tgggtcccac ccggtttctc ctgattatgg ctgctgtggg
3001 gtgaggggag ggaggggcag ccccgaggca gtctcttccc tttgagaaga tattttccca
3061 caaaggggtg ggaagccagg agtgagaagg aattcaggga gagcaaagga gccagtgctg
3121 agatgctgct gtgttggttg aggaaaacct cgggcctgag ggccaggccg gagcccaggt
3181 ctctgctgac aatgggggtt caaggaagac gtcgttatct cccctcccca cttactcgag
3241 gagagaggtg agggggggat gacttgcggg ttctgatcag gcccctgggt ggggaagggg
3301 cacagtgtcc ctcagcagct tacgcccctg gagtcttggg gggcccagcc tggccctggg
3361 gccttttcca gctactgtgc ccttgggcag ctgcgtctgg ggctcaaccc cccaatcctg
3421 ttcccctctc cagctgcggg tctgtaggca gctgtcacat ctgaagggtt tctgcaacct
3481 ggaccccatc tgggtgtggg tcagaccctg tgacccacat gccaccccca ccctccacag
3541 agcccccttg ctgggacagc cagctcacct ccaaggacat cccctcctgg cttctccccc
3601 ttccgagtct gcagcgccgt gggcttctct gccgatgggc ccgggttggg gttaaggtgg
3661 gcatcctcca ggtacaacga gcctgaagag cccctttcag tgcagacggg gctgcagagt
3721 gacactggct gggcacctgc cccacgacca atgacaagga tttccagctg aatgctttat
3781 tcccataggg atctggacct gtgcccaaga tataaatact acactttttt tttttttttt
3841 aactgacatt gtgaaattct ccctatagct tttgccattc aagcaacatt gtgatctttc
3901 ttccccgcca cgtgtgtggg aatgattgag tcctgtttgc aagctggaga ggagctctcc
3961 ctttgctagt actttctcta aagtactagt ctagtaaaat ttattcttgt tagaaggtca
4021 acaaaatatc tgtttagctt ttatgaagag tcaccgtagc agcccccacg gctggaaaga
4081 ggcctgtacg ttctggacgc gttttgttgg ctgggcttct ggaggcactg gcaaggtcaa
4141 actgcatttc tttaagaaca gttgcaggat ctggctcgcc tctgtgggaa gccggcatta
4201 caggtgcttg gtggatgggc cgtgtcacat tgccatctgg ggtcctttgg ggtttccagg
4261 ttgtcaccat gctgtcccat ttgggaatcc catacctgcc tgtccccact gcgctggctg
4321 acccttgctg cctgctgcct cttgggaggg ctttgtccct gcctctgagc tggtgggcag
4381 gatggctggg tggcccccag agaagcacag acctgagatg gggtctccat gcccggtttg
4441 ctgttggaat gatctgaaca ggaccccaaa tgcctcttcc ctctggtcat gcctcactat
4501 ctctaggagc tccatcctgt ggcttccaga gtgtgcactt ccagcccacc cgggcagtgc
4561 tgagagggag gaggagaaca aggatggccc agcctcccct ccctccccta gaccacgggg
4621 cgggcagctc gggttcctgg agggctgttt cccccacgct gtccctacat ctgctctgat
4681 ctaaaatgtc tttcctttta tgctgcgccc agtcttgggg ctcaaagatt tgcccaaacc
4741 tcattggccc tcgtgactag gctcatctag atggtgctca cgctggtgtt tgaggcattt
4801 ccactgtgat ctccacgagg ggatgttttc cgggacacat ctctggctct gggaactgcc
4861 tgactcactg aagaaactac ttttcaggca ctgtagggtc acccatatgc ctccagctca
4921 gttgacgctt aaaaacaggt gcagaaaagc tcgcgatgga aggtcttaat gagagtgtct
4981 gtctatgcca atcatgtaaa atgacgtttc ttgaaaaaga ttcagtggtt cagctttgtc
5041 agcatcatct caacacaagc ctgctggctc tttttagcat ctcatccaac catgtcatcg
5101 tccagatgag aaatcttagc ccaggtgagg ggagtaactt gcttgaggtc acacagctgg
5161 ctgttggcaa agctgggatt agaaccctca acccagggtc ccttcctctg cagcgcctac
5221 atggttggtt gaataagtgg ctgcgtttcc tggggccctg ggttttgggg aagccagtta
5281 gctgctgctt tggcactggc atggaggtga gcagtcaagg atgctggtga ggctgcagtt
5341 tctgctcttt ttcatcaggg gggatagtct ctaggatttt tcagtgagga cccttgggct
5401 ttggatgcag cttgaaccaa gaaaacgagg agggaaaggg attcagtgaa ctattcctca
5461 gtgggatcgg ttcttcagct cctgatgggg gctgtgtaat gggggcagag gccagggaaa
5521 aagatgctgt tcacccaccc tcagcttccc ttttcctaaa ttaagaggaa aagtggtcaa
5581 agaaaaactc ttcatttctc cctgattctt aaacgaaggt ggttaataga aactcaggct
5641 cccgtgacaa ggcaggacaa gagcctgttt cgctttcctc cctggccctg ccaggtgcca
5701 actcaaacac tacctttctc attggtttct aagtcagtag agacagatct gttttaagca
5761 gttgggggtt cgagtagatc tcatgggtac aggaggccag cagggaccag gccagtcagc
5821 catgctcagg acccctcggc tcctccccca gcctctagct accctgtatc gaggcaaggg
5881 gaggccagta aagtttgcca agcctgatcc tgcagcctgg tggggctggc tggggtattc
5941 ttttaccaaa ctctgtttta ccgccagccc cttgtacacc ccaatcccat gtctccctcc
6001 cttcagctgg accgtgtgcc cctttgggag gaagaagaca agccccacta gggccaaggg
6061 cagcagagcc ctgccgagtg agaggctgtg gggcagcggc tctgtcctgt gccttaccag
6121 ccctggggag gggggcattt ggctggaaga ctggaattta attgccatcg tctttgattt
6181 tgtgacattt ctgcttggaa gtgtgaacta cccccccccc cccccccgct tcctgctcct
6241 tagcatgcgt gcagctctct cctgttttgg gtgttaccct tggacactcc agctcgggga
6301 ctgctggcgt gtgagtgtgc agattcccct gtgtggtcga acctaagaac tgtggcttgg
6361 aagtgatgct ccatgtgacg acgactttgc tttctttcct cttagtgagg aggtgattcg
6421 tagatcccaa ctgcctatgt aatgtaaata atgtacattt aatttattgc tatggtagca
6481 cattgtattt gttaatgtac aaaacaaatt ctaaaaggtt gacaaatgta tattttgttg
6541 cttaaatgtg tctttgcaga aattgacaat aaataacata ttttgtgtcc taaaaaaaaa
6601 aaaaaaaaaa
//