LOCUS CR627396 5485 bp mRNA linear HTC 07-OCT-2008 DEFINITION Homo sapiens mRNA; cDNA DKFZp686F19113 (from clone DKFZp686F19113). ACCESSION CR627396 VERSION CR627396.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5485) AUTHORS Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A., Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M., Wiemann S. CONSRTM The German cDNA Consortium JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter Landstr.1, D-85764 Neuherberg, GERMANY COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de; sequenced by Medigenomix (Martinsried/Germany) within the cDNA sequencing consortium of the German Genome Project. This clone (DKFZp686F19113) is available at the RZPD Deutsches Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany. Please contact RZPD for ordering: http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686F19113 Further information about the clone and the sequencing project is available at http://mips.gsf.de/projects/cdna/ FEATURES Location/Qualifiers source 1..5485 /db_xref="H-InvDB:HIT000306169" /organism="Homo sapiens" /mol_type="mRNA" /dev_stage="fetal" /clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host DH10B; sites SfiIA + SfiIB" /clone="DKFZp686F19113" /tissue_type="fetal kidney" /note="DNA strand-exchange protein SEP1, differentially spliced" /db_xref="taxon:9606" CDS 71..5155 /codon_start=1 /gene="DKFZp686F19113" /product="hypothetical protein" /db_xref="GOA:Q8IZH2" /db_xref="H-InvDB:HIT000306169.12" /db_xref="HGNC:HGNC:30654" /db_xref="InterPro:IPR004859" /db_xref="InterPro:IPR016494" /db_xref="InterPro:IPR027073" /db_xref="InterPro:IPR040992" /db_xref="InterPro:IPR041106" /db_xref="InterPro:IPR041385" /db_xref="InterPro:IPR041412" /db_xref="UniProtKB/Swiss-Prot:Q8IZH2" /protein_id="CAH10490.1" /translation="MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCS HPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRF RSAKEAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKS WQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHE AHFSLLREEVRFGGKKTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIE RIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLP RFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKG QENSLCWTALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPF KPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLI PFIDEKRLLEAMETCNHSLKKEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIER CCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQS SRGENMMLEILVDAESDELTVENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLE EPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEHYLRRKGIIINETSAVVYA QLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLR SMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDALIQNQHKYSIKYNPG YVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKK VGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEI ITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRP LEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDE EFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSSSSSV SSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVLPQ EISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIEN FLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMKGTRMLKEILKIDGSNTVDHKNEI KQIANEIPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQ IPPVSTPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEA KEKAALFALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTANIMPSSSHLFG SMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKE AQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHH KSTPISSSRRKSRKLAVNFGVSKPSE" BASE COUNT 1787 a 1039 c 1109 g 1550 t ORIGIN 1 ctgcggcgga gccccggcgg ggcgtttggt ttcggtttgg ccctgactgg gattagtgtt 61 gacgatcgaa atgggagtcc ccaagtttta cagatggatc tcagagcggt atccctgtct 121 cagcgaagtg gtgaaagagc atcagattcc tgaatttgac aacttgtacc tggatatgaa 181 tggaattata catcagtgct cccatcctaa tgatgatgat gttcacttta gaatttcaga 241 tgataaaatc tttactgata tttttcacta cctggaggtg ttgtttcgca ttattaaacc 301 caggaaagtg ttctttatgg ctgtagatgg tgtggctcct cgagcaaaaa tgaaccagca 361 gcgtgggagg cgttttaggt cagcaaagga ggcagaagac aaaattaaaa aggcaataga 421 gaagggagaa actcttccta cagaggccag atttgattcc aactgtatca caccaggaac 481 tgaatttatg gccaggttac atgaacatct gaagtatttt gtaaatatga aaatttccac 541 agacaagtca tggcaaggag ttaccatcta cttctcaggc catgagactc ctggagaagg 601 agagcataaa atcatggaat ttatcagatc cgagaaagca aagccagatc atgatccaaa 661 caccagacac tgtctttatg gtttagatgc tgacttgatt atgcttggat taacaagtca 721 tgaggcacat ttttctctct taagagaaga agttcgattt ggtggcaaaa aaacacaacg 781 ggtatgtgct ccagaagaaa ctacatttca ccttctacac ttgtctttaa tgagagagta 841 tattgactat gagttttcag tattaaaaga aaagatcaca tttaaatatg atattgaaag 901 gataatagat gattggattt tgatggggtt tcttgttggt aatgatttta tccctcatct 961 acctcattta catattaatc atgatgcact gcctcttctt tatggaacat atgttaccat 1021 cctgccagaa cttgggggtt atattaatga aagtgggcac ctcaacttac ctcgatttga 1081 gaaatacctt gtgaaactat cagattttga tcgggagcac ttcagtgaag tttttgtgga 1141 cctaaaatgg tttgaaagca aagttggtaa caagtacctc aatgaagcag caggtgtcgc 1201 agcagaagaa gccaggaact acaaggaaaa gaaaaagtta aagggccagg aaaattctct 1261 gtgttggact gctttagaca aaaatgaagg cgaaatgata acttctaagg ataatttaga 1321 agatgagact gaagatgatg acctatttga aactgagttt agacaatata aaagaacata 1381 ttacatgacg aagatggggg ttgacgtagt atctgatgac tttctggctg atcaagctgc 1441 atgttatgtt caggcaatac agtggatttt gcactattac tatcatggag ttcagtcctg 1501 gagctggtat tatccttatc attatgcacc tttcctgtct gatatacaca acatcagtac 1561 actcaaaatc cattttgaac taggaaaacc ttttaagcca tttgaacagc ttcttgctgt 1621 actcccagca gccagcaaaa atttacttcc tgcatgctac cagcatttga tgaccaatga 1681 agactcacca attatagaat attacccacc tgattttaaa actgacctaa atgggaaaca 1741 acaggaatgg gaagctgtgg tgttaatccc ttttattgat gagaagcgat tattggaagc 1801 catggagaca tgtaaccact ccctcaaaaa ggaagagagg aaaagaaacc aacatagtga 1861 gtgcctaatg tgctggtatg atagagacac agagtttatc tatccttctc catggccaga 1921 aaagttccct gccatagaac gatgttgtac aaggtataaa ataatatcct tagatgcttg 1981 gcgtgtagac ataaacaaaa acaaaataac cagaattgac cagaaagcat tatatttctg 2041 tggatttcct actctgaaac acatcagaca caaatttttt ttgaagaaaa gtggtgttca 2101 agtattccag caaagcagtc gtggagaaaa catgatgttg gaaatcttag tggatgcaga 2161 atcagatgaa cttaccgtag aaaatgtagc ttcatcagtg cttggaaaat ctgtctttgt 2221 taattggcct caccttgagg aagctagagt cgtggctgta tcagatggag aaactaagtt 2281 ttacttggaa gaacctccag gaacacagaa gctttattca ggaagaactg ccccaccatc 2341 taaagtggtt catcttggag ataaagaaca atctaactgg gcaaaagaag tacaaggaat 2401 ttcagaacac tacctgagaa gaaaaggaat aataataaat gaaacatctg cagttgtgta 2461 tgctcagtta ctcacaggtc gtaaatatca aataaatcaa aatggtgaag ttcgtctaga 2521 gaaacagtgg tcaaaacaag ttgttccttt tgtttatcaa actattgtca aggacatccg 2581 agctttcgac tcccgtttct ccaatatcaa aacattggat gatttgtttc ctctgagaag 2641 tatggtcttt atgctgggaa ctccctatta tggctgcact ggagaagttc aggattcagg 2701 tgatgtgatt acagaaggta ggattcgtgt gattttcagc attccatgtg aacccaatct 2761 tgatgcttta atacagaacc agcataaata ttctataaag tacaacccag gatatgtgtt 2821 ggccagtcgc cttggagtga gtggatacct tgtttcaagg tttacaggaa gtatttttat 2881 tggaagagga tctaggagaa accctcatgg agaccataaa gcaaatgtgg gtttaaatct 2941 caaattcaac aagaaaaatg aggaggtacc tggatatact aagaaagttg gaagtgaatg 3001 gatgtattca tctgcagcag aacaacttct ggcagagtac ttagagagag ctccagaact 3061 atttagttat atagccaaaa atagccaaga ggatgtgttc tatgaagatg acatttggcc 3121 tggagaaaat gagaatggtg ctgaaaaagt tcaagaaatt attacttggc taaaaggaca 3181 tcctgtcagt actttatctc gttcttcttg tgatttacaa attctggatg cagctattgt 3241 tgagaaaatt gaggaagaag tcgaaaagtg caagcaaaga aagaataata agaaggtgcg 3301 agtaacagtg aaaccccatt tgctatacag acctttagaa cagcaacatg gagtcattcc 3361 tgatcgggat gcagaatttt gtctttttga ccgtgttgta aatgtgagag aaaacttctc 3421 agttccagtt ggccttcgag gcaccatcat aggaataaaa ggagctaata gagaagccga 3481 tgtactattt gaagtattat ttgatgaaga atttcctgga gggttaacaa taagatgctc 3541 acctggtaga ggttatcgac tgccaacaag tgccttggtg aacctttctc atgggagtcg 3601 ctctgaaact ggaaatcaga agttgacagc catcgtaaaa ccacaaccag ctgtacatca 3661 acatagctca agttcatcag tttcctctgg gcatttggga gccctcaacc attcccctca 3721 atcacttttt gttcctactc aagtacctac taaagatgat gatgaattct gcaacatttg 3781 gcagtcctta cagggatctg gaaagatgca atactttcag ccaactatac aagagaaggg 3841 tgcagttcta cctcaagaaa taagccaagt aaatcaacat cataaatctg gctttaatga 3901 caacagtgtt aaatatcagc aaagaaaaca tgaccctcac agaaaattta aagaagagtg 3961 taagagtcct aaagctgagt gttggtccca aaaaatgtcc aataagcagc ctaactctgg 4021 aattgagaac tttttagcat ctttgaatat ctccaaagaa aatgaagtac agtcatctca 4081 tcatggggag cctccaagtg aagagcattt gtcaccacag tcatttgcca tgaagggaac 4141 acggatgctt aaagaaattc taaaaattga tggctctaac actgtggacc ataagaatga 4201 aatcaaacag attgctaatg aaatccctgt ttcctctaac agaagagatg aatatggatt 4261 accctctcag cctaaacaaa ataagaaatt agcatcttat atgaacaagc ctcacagtgc 4321 taatgagtac cataatgttc agtctatgga caatatgtgt tggcctgccc ccagccagat 4381 ccctcctgta tccacaccag taactgaact ttctcgaatt tgttcccttg ttggaatgcc 4441 acaacctgat ttctcctttc ttaggatgcc acagacaatg accgtttgcc aagtaaaatt 4501 atctaatggc ttactggtac atgggccaca gtgccactct gaaaatgaag ccaaagagaa 4561 agctgcactt tttgctttac aacagttggg ctccttaggc atgaatttcc ctttgccttc 4621 acaagtattt gcaaattatc cttcagctgt accacctgga accattcctc cagcctttcc 4681 cccacctact gctaatataa tgccttcgtc gtctcatctc tttggctcaa tgccatgggg 4741 accatcggtg ccagttcctg ggaagccctt ccatcatact ttatattctg ggaccatgcc 4801 catggctggg ggaataccag ggggtgtgca caatcagttt atacctctgc aggttactaa 4861 aaaaagggtt gcaaacaaaa agaactttga gaataaggaa gcccagagtt ctcaagccac 4921 tccagttcag actagccagc cagattcttc caacattgtc aaagtaagtc cacgggagag 4981 ctcatcagct tctttgaagt cctctccgat tgctcaacct gcatcttctt ttcaagttga 5041 aactgcctct caaggccata gtatatctca ccataagtca acaccaatct cttcttcaag 5101 aagaaaatca agaaaactgg ctgttaattt tggtgtttct aaaccttctg agtaaatttg 5161 gctcttagaa ttaagttaat ttcttctctt tccatctacc tttttataaa tacatatcta 5221 tgtctcataa aaattagaat gtactatttt aaaataatat gtgtaaattg aaattttttt 5281 catttttaag ttatcaggca cttttcatgc tgtttaaaag actgtgtatc aaattgtgca 5341 ctttaagtat gtgcagtttg ttgtatgtca attatacctc aataaatctg taataaaaaa 5401 ctaaattaaa ccttgcatta aaataatatc acagtatcag tggactaaac attaaaatgt 5461 accactcgaa aaaaaaaaaa aaaaa //