LOCUS CR627387 2692 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp781D2042 (from clone DKFZp781D2042).
ACCESSION CR627387
VERSION CR627387.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2692)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp781D2042) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp781D2042
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..2692
/db_xref="H-InvDB:HIT000306160"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="781 (synonym: hlcc4). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp781D2042"
/tissue_type="hippocampus"
/note="synaptotagmin I"
/db_xref="taxon:9606"
CDS 258..1526
/codon_start=1
/gene="DKFZp781D2042"
/product="hypothetical protein"
/db_xref="GOA:P21579"
/db_xref="H-InvDB:HIT000306160.12"
/db_xref="HGNC:HGNC:11509"
/db_xref="InterPro:IPR000008"
/db_xref="InterPro:IPR001565"
/db_xref="InterPro:IPR015428"
/db_xref="InterPro:IPR035892"
/db_xref="PDB:2K45"
/db_xref="PDB:2K4A"
/db_xref="PDB:2K8M"
/db_xref="PDB:2KI6"
/db_xref="PDB:2LHA"
/db_xref="PDB:2N1T"
/db_xref="PDB:2R83"
/db_xref="PDB:3F00"
/db_xref="PDB:3F01"
/db_xref="PDB:3F04"
/db_xref="PDB:3F05"
/db_xref="PDB:4ISQ"
/db_xref="PDB:4V11"
/db_xref="PDB:6G5F"
/db_xref="PDB:6G5K"
/db_xref="UniProtKB/Swiss-Prot:P21579"
/protein_id="CAH10483.1"
/translation="MVSESHHEALAAPPVTTVATVLPSNATEPASPGEGKEDAFSKLK
EKFMNELHKIPLPPWALIAIAIVAVLLVLTCCFCICKKCLFKKKNKKKGKEKGGKNAI
NMKDVKDLGKTMKDQALKDDDAETGLTDGEEKEEPKEEEKLGKLQYSLDYDFQNNQLL
VGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYS
ELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGD
ICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN
TLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWS
DMLANPRRPIAQWHTLQVEEEVDAMLAVKK"
BASE COUNT 901 a 509 c 562 g 720 t
ORIGIN
1 accaccaaga ataaaatagt tgtttgtccc ctacagtaga acaagtttgc ccattcatcc
61 ttgtgataga tatgcatgca aaaccaaaat gaaatcaaat ccccacagat ggctcgtaag
121 tcaaaaacac tgtttaattc tttcactgca tccctttggg aagcctggcc cttgaaaaac
181 agaataattc tgaaagaaag aaaacaaaga aaaacatact ccagaattcc taatagaaca
241 cttcacctga acctaaaatg gtgagcgaga gtcaccatga ggccctggca gccccgcctg
301 tcaccactgt cgcgactgtt ctgccaagca acgccacaga gccagccagt cctggagaag
361 gaaaggaaga tgcattttct aagctgaagg agaagtttat gaatgagttg cataaaattc
421 cattgccacc gtgggcctta attgcaatag ccatagtcgc agtcctttta gtcctgacct
481 gctgcttttg tatctgtaag aaatgtttgt tcaaaaagaa aaacaagaag aagggaaagg
541 aaaaaggagg gaagaatgcc attaacatga aagatgtaaa agacttaggg aagacgatga
601 aagatcaggc cctcaaggat gatgatgctg aaactggatt gacagatgga gaagaaaaag
661 aagaacccaa agaagaggag aaactgggaa aacttcagta ttcactggat tatgatttcc
721 aaaataacca gctgctggta gggatcattc aggctgccga actgcccgcc ttggacatgg
781 ggggcacatc tgatccttac gtgaaagtgt ttctgctacc tgataagaag aagaaatttg
841 agacaaaagt ccaccgaaaa acccttaatc ctgtcttcaa tgagcaattt actttcaagg
901 taccatactc ggaattgggt ggcaaaaccc tagtgatggc tgtatatgat tttgatcgtt
961 tctctaagca tgacatcatt ggagaattta aagtccctat gaacacagtg gattttggcc
1021 atgtaactga ggaatggcgt gacctgcaaa gtgctgagaa ggaagagcaa gagaaattgg
1081 gtgatatctg cttctccctt cgctacgtac ctactgctgg taagctgact gttgtcattc
1141 tggaggcaaa gaacctgaag aagatggatg tgggtggctt atccgatcct tatgtgaaga
1201 ttcatctgat gcagaatggt aagaggctga agaagaaaaa gacaacaatt aaaaagaaca
1261 cacttaaccc ctactacaat gagtcattca gctttgaagt accttttgaa caaatccaga
1321 aagtgcaggt ggtggtaact gttttggact atgacaagat tggcaagaac gatgccatcg
1381 gcaaagtctt tgtgggctac aacagcaccg gcgcggagct gcgacactgg tcagacatgc
1441 tggccaaccc caggcgacct attgcccagt ggcacaccct gcaggtagag gaggaagttg
1501 atgccatgct ggccgtcaag aagtaaagga aagaagaagc ctttctgcat ttgcccatat
1561 agtgctcttt agccagtatc tgtaaatacc tcagtaatat gggtcctttc atttttccag
1621 ccatgcattc ctaacacaat tcagtggtac ttggaatcct gttttaattt gcacaaattt
1681 aaatgtagag agcccctaag tccttcatca taccactgcc ctccaaatct actcttcttt
1741 taagcaatat gatgtgtaga tagagcatga atgaaattat ttattgtatc acactgttgt
1801 atataccagt atgctaaaga tttatttcta gtttgtgtat ttgtatgttg taagcgtttc
1861 ctaatctgtg tatatctaga tgtttttaat aagatgttct attttaaact atgtaaattg
1921 actgagatat aggagagctg ataatatatt atacggtaaa tatagtatcg tctgcattcc
1981 agcaaaaata tcaactcgta aggcactagt acagttaaac tgacatctta aaggacaact
2041 taaacctgag ctttctattg aatcatttga gtaccaagat aaacttacac cacatacttg
2101 gtgggtgaat ccaattttgt agaattccta cacaggcaaa atagcatgat ctgagcagca
2161 gcatccaggc tgacctcaag gaagcatagc cacaaaacag aatagcacct gtctgtacat
2221 atttacaaag ctaaaataat ggcttcactc ttatatttga ggaagcaact gaacaggagt
2281 caatgatttc atattactgc atatagaata acaacaaggt gttccgtgtg tgtgtgtgtg
2341 tgtgtgtgtg tgtgtgcaca tttgtttggg gatgggggag aagaagctaa ggggagaagt
2401 caacatttat gaaatattgc ctgactattt aaaaagaaaa aagtagctct ccattatcac
2461 ctttatacaa aatgtacatc ctgtgaattc tgttccagat ttcacaccta caataattcc
2521 aaaaggtttg cacattagag tttgtaacaa aatattttat tatataaaac caggttagaa
2581 ggaatgcagg atatttttaa cacaacaatc tgtgcttatt acacaaaatt actttgtggt
2641 aaacagacag tattgtaatc ccatcaaaag ataaaaaaaa aaaaaaaaaa aa
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