LOCUS CR627364 2340 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686L18234 (from clone DKFZp686L18234).
ACCESSION CR627364
VERSION CR627364.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2340)
AUTHORS Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Medigenomix (Martinsried/Germany) within the cDNA
sequencing
consortium of the German Genome Project.
This clone (DKFZp686L18234) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686L18234
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..2340
/db_xref="H-InvDB:HIT000306139"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686L18234"
/tissue_type="small intestine"
/note="mesoderm specific transcript isoform b"
/db_xref="taxon:9606"
CDS 111..1091
/codon_start=1
/gene="DKFZp686L18234"
/product="hypothetical protein"
/db_xref="GOA:Q5EB52"
/db_xref="H-InvDB:HIT000306139.12"
/db_xref="HGNC:HGNC:7028"
/db_xref="InterPro:IPR000073"
/db_xref="InterPro:IPR000639"
/db_xref="InterPro:IPR029058"
/db_xref="UniProtKB/Swiss-Prot:Q5EB52"
/protein_id="CAH10465.1"
/translation="MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYK
GLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSD
KPRPHHYSIFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLT
IKSLCLSNGGIFPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRP
SESELWDMWAGIRNNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDP
VNPYPEFLELYRKTLPRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF"
BASE COUNT 640 a 515 c 493 g 692 t
ORIGIN
1 tcctccctgg gaacagggtg aaggccgaga acctctggcc tcaggaagcg catgcgcaac
61 cggttctccg aaacatggag tcctgtaggc aaggtcttac ctgaatcagg atgagggagt
121 ggtgggtcca ggtggggctg ctggccgtgc ccctgcttgc tgcgtacctg cacatcccac
181 cccctcagct ctcccctgcc cttcactcat ggaagtcttc aggcaagttt ttcacttaca
241 agggactgcg tatcttctac caagactctg tgggtgtggt tggaagtcca gagatagttg
301 tgcttttaca cggttttcca acatccagct acgactggta caagatttgg gaaggtctga
361 ccttgaggtt tcatcgggtg attgcccttg atttcttagg ctttggcttc agtgacaaac
421 cgagaccaca tcactattcc atatttgagc aggccagcat cgtggaagcg cttttgcggc
481 atctggggct ccagaaccgc aggatcaacc ttctttctca tgactatgga gatattgttg
541 ctcaggagct tctctacagg tacaagcaga atcgatctgg tcggcttacc ataaagagtc
601 tctgtctgtc aaatggaggt atctttcctg agactcaccg tccactcctt ctccaaaagc
661 tactcaaaga tggaggtgtg ctgtcaccca tcctcacacg actgatgaac ttctttgtat
721 tctctcgagg tctcacccca gtctttgggc cgtatactcg gccctctgag agtgagctgt
781 gggacatgtg ggcagggatc cgcaacaatg acgggaactt agtcattgac agtctcttac
841 agtacatcaa tcagaggaag aagttcagaa ggcgctgggt gggagctctt gcctctgtaa
901 ctatccccat tcattttatc tatgggccat tggatcctgt aaatccctat ccagagtttt
961 tggagctgta caggaaaacg ctgccgcggt ccacagtgtc gattctggat gaccacatta
1021 gccactatcc acagctagag gatcccatgg gcttcttgaa tgcatatatg ggcttcatca
1081 actccttctg agctggaaag agtagcttcc ctgtattacc tcccctactc ccttatctgt
1141 tgtgtattcc acttaggaag aaatgcccaa aagaggtcct ggccatcaaa cataattctc
1201 tcacaaagtc cactttactc aaattggtga acagtgtata ggaagaagcc agcaggagct
1261 ctgactaagg ttgacataat agtccacctc ccattacttt gatatctgat caaatgtata
1321 gacttggctt tgttttttgt gctattagga aattctgatg agcattacta ttcactgatg
1381 cagaaagacg ttcttttgca taaaagactt tttttaacac tttggacttc tctgaaatat
1441 ttagaagtgc taatttctgg cccaccccca acaggaattc tatagtaagg aggaggagaa
1501 ggggggctcc ttccctctcc tcgaatgacg ttatgggcac atgcctttta aaagttcttt
1561 aagcaacaca gagctgagtc ctctttgtca tacctttgga tttagtgttt catcagctgt
1621 ttttagttat aaacattttg ttaaaataga tattggttta aatgatacag tattttaggt
1681 atgatttaag actatgattt acctatacat tatatatatt ttataaagat actaaaccag
1741 cataccctta ctctgccaga gtagtgaagc taattaaaca cgtttggttt ctgaataaat
1801 tgaactaaat ccaaactatt tcctaaaatc acaggacatt aaggaccaat agcatctgtg
1861 ccagagatgt actgttatta gctgggaaga ccaattctaa cagcaaataa cagtctgaga
1921 ctcctcatac ctcagtggtt agaagcatgt ctctcttgag ctacagtaga ggggaaggga
1981 ttgttgtgta gtcaagtcac catgctgaat gtacactgat tcctttatga tgactgctta
2041 actccccact gcctgtccca gagaggcttt ccaatgtagc tcagtaattc ctgttacttt
2101 acagacagga aagttccaga aactttaaga acaaactctg aaagacctat gagcaaatgg
2161 tgctgaatac ttttttttta aagccacatt tcattgtctt agtcaaagca ggattattaa
2221 gtgattattt aaaattcgtt tttttaaatt agcaacttca agtataacaa ctttgaaact
2281 ggaataagtg tttattttct attaataaaa atgaattgtg ataaaaaaaa aaaaaaaaaa
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