LOCUS CR627109 6949 bp mRNA linear HTC 07-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686F0145 (from clone DKFZp686F0145).
ACCESSION CR627109
VERSION CR627109.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6949)
AUTHORS Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (17-AUG-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Medigenomix (Martinsried/Germany) within the cDNA
sequencing
consortium of the German Genome Project.
This clone (DKFZp686F0145) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686F0145
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..6949
/db_xref="H-InvDB:HIT000306080"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686F0145"
/tissue_type="amygdala"
/note="inter-alpha trypsin inhibitor heavy chain precursor
5, N- and C-terminus truncated, not fully spliced"
/db_xref="taxon:9606"
CDS <5192..>6571
/codon_start=1
/gene="DKFZp686F0145"
/product="hypothetical protein"
/db_xref="GOA:Q86UX2"
/db_xref="H-InvDB:HIT000306080.14"
/db_xref="HGNC:HGNC:21449"
/db_xref="InterPro:IPR002035"
/db_xref="InterPro:IPR010600"
/db_xref="InterPro:IPR013694"
/db_xref="InterPro:IPR036465"
/db_xref="UniProtKB/Swiss-Prot:Q86UX2"
/protein_id="CAH10363.1"
/translation="DDSGPPPSTVINQNETFANIIFKPTVVQQARIAQNGILGDFIIR
YDVNREQSIGDIQVLNGYFVHYFAPKDLPPLPKNVVFVLDSSASMVGTKLRQTKDALF
TILHDLRPQDRFSIIGFSNRIKVRKDHLISVTPDSIRDGKVYIHHMSPTGGTDINGAL
QRAIRLLNKYVAHSGIGDRSVSLIVFLTDGKPTVGETHTLKILNNTREAARGQVCIFT
IGIGNDVDFRLLEKLSLENCGLTRRVHEEEDAGSQLIGFYDEIRTPLLSDIRIDYPPS
SVVQATKTLFPNYFNGSEIIIAGKLVDRKLDHLHVEVTASNSKKFIILKTDVPVRPQK
AGKDVTGSPRPGGDGEGDPNHIERLWSYLTTKELLSSWLQSDDEPEKERLRQRAQALA
VSYRFLTPFTSMKLRGPVPRMDGLEEAHGMSAAMGPEPVVQSVRGAGTQPGPLLKKPY
QPRIKISKTS"
BASE COUNT 1899 a 1510 c 1611 g 1929 t
ORIGIN
1 aagaggatgg agctagtatg tattgagcac ctactgtctg ccaggcacca cacggggtac
61 cttacatatg agatctcact acatctcaac aatgattctg tgactgtgga attgtttcca
121 tgtaacagat gtgggactga agctcaggaa tattaagtca gtcgttttga ttcagtcaca
181 ctctagaacc cactctcttt ggtattctgt agtttgcaaa gataacacaa aacttcttgc
241 tctaaaatac tgggctttag aaaagaagag agccccctgg gagtcctggt ggcctgagag
301 gcagggaaga gtcagtgagt ggaggaagag catgaatgaa ttttcccgag ggcaggagag
361 gcagttgtgt gtccctgggg ttgtcttgca tgggatcacc aatgcctgca tgaagacagg
421 aagatgggat tagaagactt ggcctccctc aaatcggagc agctgctcca gctcaccata
481 gaagtgggca agaaggagag aacacgaagg aggaaagaga catgggttct cattagacaa
541 gtgggtcaga ttcttcctct tttttgttct gcaccaatgt ctttccttgc ggtcttcatt
601 aacctgtgac tctgatgacc ctgcgggtga ctcatttttg tgcttaggaa atatctgtgg
661 cggtaagcag ggtgagcccc cattcacagc aaggaaaaac ggagtcatgt tcttctgctc
721 tgggattttg gtcagtaacg gtggaacagc ccatatgaac ctacttaaca gattttttcc
781 cccttaataa aaagatgatt ctattttcta gagatgctcc tctggaattg ctcccagtaa
841 acttaaaaaa aaagtagtga aaaatttatt gggtcacatt tactgtctgc ttcttcctgg
901 gtggtggttg gcctcaggaa ccaggctcct tggtgagtaa ccaaactgag aatcaaccca
961 ttctttgggt gtgtaaaata atcccattta gttgaatctc atgaattttc atcatgagct
1021 agtaaaacca gaggtcacta ggaagccaaa ataatcatac agtatccttc ctcatggtcc
1081 atatcaaaga gcctagtcga gtgaatgatg gacagagaaa ttatactttc taatccccag
1141 tgcttttact cagccatgaa tggtattaat tcagggagct tgtaaaaagc attttcacga
1201 gattggaagc aagactaagt aggtacatgc tggcagcata aagagagtct aatctaatta
1261 ttgtagaatc ttagagataa tctaagtgct gcctaattgc atacaacaca ttttattgac
1321 acttttctat gtgtaaggca cacagaccat gtgtaagcta catgcctatt ttctatgggc
1381 aaaaaccgga atcacccaga gggctcgtta aaacacaaat ggcggagtcc catccccaga
1441 gtttctgact ccgagtttct ggggtgggcc tgagaattgg catttctagc aagttcccag
1501 gagctgctga tgctgctggt tcaagatcac actgtgagaa ctgctctaca ccctcgtggg
1561 ggggattatt ccagggttca cttgagccct tctaatggga tgggttgtga aggcggccga
1621 tcccaacagg acagctttct tagggttcac cgacactgcg ctgaaaagtg cctcccggaa
1681 actctctccc tggtcctaat tctgccggct ggaattgctc tggacacacc taatcctcat
1741 ttaataaatg cccatgcaca ttcatcctaa ggagaaggac agagaggggt ctgtttggca
1801 aataacattg ttatgttcca tgccggggaa tgcctgttta atctactttg ctaacaataa
1861 atttaaatgt taataactgg ggtgtacata caccataaac ggtacaaatg tcatgtgtac
1921 agcttgataa aattttacat aggtataccc tcattcaact gccttccacc tcaagacatg
1981 gaatattttc acccttcctc aaaattacca cgtgctcttt cctggtcctg agcaggcctt
2041 caaaggtcag cagtgttcta ctccagttgc catgggtatt tcatgctcct cttgaacttt
2101 atgcagatgg aagcagagag aacatgcgct tttgtatctg atattttcac ccaagaagac
2161 tgtgaggttc aaccatgttc taaatagcaa tattagttct tttgttttta ttgccttgtg
2221 gtatcccaag tttgacttgt gtttatagtt gtatatgtaa ttgctccttc tatttttttt
2281 tttgcggggg tagggggtgg tgggatggaa ttttgctctt gttgcccagg ctggagtcca
2341 atggcactat ctcagctcac tgcaacctcc gcctccctgg ttcaagcgat attctcctgc
2401 ctcagcctcc tgagtagctg ggattacagc caccacaccc acctaatttt ttgtattttt
2461 agtagagacg aggtttctcc atgttggcca ggctgatctc aaactcctga cctcaggtga
2521 tccacccgcc tcagcctccc aaggtgctgg gattacaggc gtgagccacc gggcctggcc
2581 cctccttcta ttttatatag ttaaggttgg aaattgatat ggtttggctc tgtgtcccca
2641 cggaaatagc atttcgaatt gtaatcccca tgtgtcggag gagtggcctg gtgggaggtg
2701 attggaccat ggaggtgaat ttcccccttg ctgttctcgt gatagtgagt gagttctcac
2761 gagatctcat ggtttaaaag tccggcgctt cccagttctg tctctcgctc ctgccgcctt
2821 gtagacgtgt tcgctttgcg tttgccttct gcgtgattgt aagtttcccg aggcttcccc
2881 agccatgcgg aactgtgagt caattaaacc tcttttctgt ataaactacc cagtctcagg
2941 tacttcttga taacagtgtg aaaatggact gatacagtaa tgatataagc tagcatgact
3001 gctgactgtg aactggaaaa tggtgctaag tacgtgacat cacttgatct tttcaatact
3061 gtgagattgg tactatcatt aatccatttt acagatgaga taaccaaggc cgagtaactt
3121 gctcaaagtc tcacagctgt taagaagtga aaccaatatt tgaatgcagg tttctgacca
3181 tgatcgtgcg ttcttagctg atatattatg atgcctgtca ctctgggtgc tttaacaatg
3241 accaccaatg agagattgac cctggacagc atgcagtttc ctttaatttc aaggactttt
3301 cctttttcag cacccgtttc tttgtcctgt ctaatgggtc taaggcatct tcaaccatgc
3361 tggtagtgac ctgggctgtg ccacctgtcc atgcactgtc tggattttcc caactccttc
3421 agatgaacag atctgtggac tcgtgttctc tcttatgtaa ctgtctccct acaaaaataa
3481 ccttttctct ttgctggctc tctgatcact tccaaaatcc ctgtccttga taagtgcaaa
3541 taatagaaga atctgttcta ccttgtggtt cctgttaagg ttacacctaa attgtctctg
3601 aaaaataatt gcctattttg ttaaaggaaa tgtttaaact tcctttgact tgtgtgtcta
3661 ataaaccctc agcagaagga agtttatttt taaatacaaa ttactgtggc cacttaacgc
3721 ctcatttcct ttttcattct gctaattgga gatgggaaat ggctggtcag cctatttcat
3781 gctatcaact tgagtacatt taaaaagata atcagaggct ttgcagcagt tttaagtctg
3841 gctttgattc aatatctgga taaaaagcct ccacatgccc ttatgattaa gaattcttgt
3901 ttatgttttc atgttctcca gggtgcatgc agacctcatc ttttggggtt ttattgctaa
3961 gtacatagat atggtgttgt ttgggtttat aaacgtgagt agttttgcta aataattctc
4021 tgtgttctaa caggaaatga aggtcaggac taaaagatgg gatgctcttt gcttaatctg
4081 tcatcacact aggttttcat aaattacata atatccattt atctgtttat ctttctgtaa
4141 ttctaattta tatcctaaat ttcatgtgaa aaagctttga gaattttttt tttttaatga
4201 gccgtaagcc gggcatggtg gctcacgcct gtactcctag aactttggga gtccgaggca
4261 ggaggatggc ttgagcctag gagttcaaga ccagtctgag caacatagca agaccctgtc
4321 tctacaaaaa acaacaacaa aaaatgatcc aggtatgctg gtgtgtgcct gtagtcccag
4381 ctacttggca ggctgaggtg agagaatcac ttgagtccaa aagtgagctg tgattgcacc
4441 attgcgctct gggtgacaga ttgagacgct gtctcaaaaa aaaaaaggaa tacagaaaaa
4501 gagaaatccc ataggacaaa tgaccagcga tttatcacat atatgcagca tcacaaaaga
4561 ggtggaggca gacactggag attaaaagaa gcaagaaata aaaatggaat gtgattgggg
4621 actcttctaa tcttcattca agcaaatcaa ccataccaag accctttctt tagggaatca
4681 gataaattta aatacaaact gagaattaga taataatagg gcattgagca ttaattttgt
4741 tacttgtgat aatggttttg tggttatgtt agtaaaagag ttcttacagg taaagacata
4801 ctggagtatt tatggatgaa atatggtgtc tggaatttgt tttaaaatgc tctaggaaaa
4861 aatggggaat agataaaaac atacaaaagg ttggtaacat gctgatgttt gttaaagttg
4921 ggtgatgggt acaggggttc attttactat tctctctact tttgtgtgtt ttaaaaatgt
4981 tcataagaaa aggttcaaaa agaggcataa gaggaaacta tatgatgaca taactctcgc
5041 attgtgatat atgagtacag tcttagaagt tcctgtgaaa tacaagcctg taataaaatg
5101 aaatctaaaa ctctgtgtct gccaaacagt ttttatttct ttttggaaaa atatatatta
5161 agttattaat tatgtttcta tcttgtttgc agatgattct gggcctcccc catctactgt
5221 cattaaccaa aatgaaacat ttgccaacat aatttttaaa cctactgtag tacaacaagc
5281 caggattgcc cagaatggaa ttttgggaga ctttatcatt agatatgacg tcaatagaga
5341 acagagcatt ggggacatcc aggttctaaa tggctatttt gtgcactact ttgctcctaa
5401 agaccttcct cctttaccca agaatgtggt attcgtgctt gacagcagtg cttctatggt
5461 gggaaccaaa ctccggcaga ccaaggatgc cctcttcaca attctccatg acctccgacc
5521 ccaggaccgt ttcagtatca ttggattttc caaccggatc aaagtacgga aggaccactt
5581 gatatcagtc actccagaca gcatcaggga tgggaaagtg tacattcacc atatgtcacc
5641 cactggaggc acagacatca acggggccct gcagagggcc atcaggctcc tcaacaagta
5701 cgtggcccac agtggcattg gagaccggag cgtgtccctc atcgtcttcc tgacggatgg
5761 gaagcccacg gtcggggaga cgcacaccct caagatcctc aacaacaccc gagaggccgc
5821 ccgaggccaa gtctgcatct tcaccattgg catcggcaac gacgtggact tcaggctgct
5881 ggagaaactg tcgctggaga actgtggcct cacacggcgc gtgcacgagg aggaggacgc
5941 aggctcgcag ctcatcgggt tctacgatga aatcaggacc ccgctcctct ctgacatccg
6001 catcgattat ccccccagct cagtggtgca ggccaccaag accctgttcc ccaactactt
6061 caacggctcg gagatcatca ttgcggggaa gctggtggac aggaagctgg atcacctgca
6121 cgtggaggtc accgccagca acagtaagaa attcatcatc ctgaagacag atgtgcctgt
6181 gcggcctcag aaggcaggga aagatgtcac aggaagcccc aggcctggag gcgatggaga
6241 gggggacccc aaccacatcg agcgtctctg gagctacctc accacaaagg agctgctgag
6301 ctcctggctg caaagtgacg atgaaccgga gaaggagcgg ctgcggcagc gggcccaggc
6361 cctggctgtg agctaccgct tcctcactcc cttcacctcc atgaagctga gggggccggt
6421 cccacgcatg gacggcctgg aggaggccca cggcatgtcg gctgccatgg gacccgaacc
6481 ggtggtgcag agcgtgcgag gagctggcac gcagccagga ccgttgctca agaagccata
6541 ccagccaaga attaaaatct ctaaaacatc aggtaaagca aaggatgcgg ttgtgtgtgg
6601 attgagagta agagatgttt aaaaagtgta aaaccaggcc aggtgtactg gctcacgcct
6661 gtaatcccag cactttggga ggccgaggtg ggtgtattgc ttgaggtcag gagttcaaga
6721 ccagcctggc caacatggtg caacctcgtc tctactaaga atacaaaaat tagccaggca
6781 tggtggcagg ggcctgtagt tccagctact ggggaggctg aggcaggaga atcacttgaa
6841 cctgggaagt tgaggttaca gtgagccgag attgtgccac cacactctag cctggactac
6901 aagagtgaaa ctctgtctca aaaaaaaaag aaaaaaaaaa aaaaaaaaa
//