LOCUS CR542269 1149 bp mRNA linear HUM 29-JUN-2004 DEFINITION Homo sapiens full open reading frame cDNA clone RZPDo834H0426D for gene EDG1, endothelial differentiation, sphingolipid G-protein-coupled receptor, 1; complete cds, incl. stopcodon. ACCESSION CR542269 VERSION CR542269.1 KEYWORDS Full ORF shuttle clone, Gateway(TM), complete cds. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1149) AUTHORS Halleck A., Ebert L., Mkoundinya M., Schick M., Eisenstein S., Neubert P., Kstrang K., Schatten R., Shen B., Henze S., Mar W., Korn B., Zuo D., Hu Y., LaBaer J. TITLE Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201) JOURNAL Unpublished. REFERENCE 2 (bases 1 to 1149) AUTHORS Halleck A., Ebert L., Mkoundinya M., Schick M., Eisenstein S., Neubert P., Kstrang K., Schatten R., Shen B., Henze S., Mar W., Korn B., Zuo D., Hu Y., LaBaer J. JOURNAL Submitted (28-JUN-2004) to the INSDC. RZPD Deutsches Ressourcenzentrum fuer Genomforschung GmbH, Im Neuenheimer Feld 580, D-69120 Heidelberg, Germany COMMENT RZPD; RZPDo834H0426D, ORFNo 5082 www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=RZPDo834H0426D RZPDLIB; Human Full ORF Clones Gateway(TM) - RZPD (kan-resist.) RZPD LIB No. 834 www.rzpd.de/cgi-bin/products/showLib.pl.cgi/response?libNo=834 www.rzpd.de/products/orfclones/ Contact: Inge Arlart RZPD Deutsches Ressourcenzentrum fuer Genomforschung GmbH, Heubnerweg 6, D-14059 Berlin, Germany Tel: +49 30 32639 100 Fax: +49 30 32639 111 www.rzpd.de This clone is available from RZPD; Contact RZPD (customer.service@rzpd.de) for further information. Clone name at Harvard Institute of Proteomics (www.hip.harvard.edu): FLH131092.01X This CDS clone is part of a collection of human full ORF clones jointly established and verified by the Harvard Institute of Proteomics (HIP) and RZPD. This CDS has been cloned incl. stopcodon. The CDS has been inserted into pDONR201 via a BP Clonase(TM) reaction. Additional sequence has been added in front of the start codon: att..AAAAAA GCA GGC TCC ACC (ATG). The stopcodon is followed by the 3' att site: GACCCAGCTTTCTT..att The clone is validated by full sequence check. Compared to the reference sequence NM_001400 (GI:13027635) we did not find any amino acid exchanges. Clone distribution: http://www.rzpd.de/products/orfclones/ FEATURES Location/Qualifiers source 1..1149 /db_xref="H-InvDB:HIT000269137" /organism="Homo sapiens" /lab_host="DH5Alpha" /mol_type="mRNA" /clone_lib="Human Full ORF Clones Gateway(TM) - RZPD" /clone="RZPDo834H0426D" /note="Vector: pDONR201, Site_1: attP1; Site_2: attP2" /db_xref="taxon:9606" CDS 1..1149 /codon_start=1 /gene="EDG1" /db_xref="GOA:P21453" /db_xref="H-InvDB:HIT000269137.14" /db_xref="HGNC:HGNC:3165" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000987" /db_xref="InterPro:IPR004061" /db_xref="InterPro:IPR017452" /db_xref="PDB:3V2W" /db_xref="PDB:3V2Y" /db_xref="UniProtKB/Swiss-Prot:P21453" /protein_id="CAG47065.1" /translation="MGPTSVPLVKAHRSSVSDYVNYDIIVRHYNYTGKLNISADKENS IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANL LLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLKMKLHNGSNNFRL FLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYILFCTTVFTLLLLSIV ILYCRIYSLVRTRSRRLTFRKNISKASRSSEKSLALLKTVIIVLSVFIACWAPLFILL LLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMSCCKCPSG DSAGKFKRPIIAGMEFSRSKSDNSSHPQKDEGDNPETIMSSGNVNSSS" BASE COUNT 247 a 364 c 262 g 276 t ORIGIN 1 atggggccca ccagcgtccc gctggtcaag gcccaccgca gctcggtctc tgactacgtc 61 aactatgata tcatcgtccg gcattacaac tacacgggaa agctgaatat cagcgcggac 121 aaggagaaca gcattaaact gacctcggtg gtgttcattc tcatctgctg ctttatcatc 181 ctggagaaca tctttgtctt gctgaccatt tggaaaacca agaaattcca ccgacccatg 241 tactatttta ttggcaatct ggccctctca gacctgttgg caggagtagc ctacacagct 301 aacctgctct tgtctggggc caccacctac aagctcactc ccgcccagtg gtttctgcgg 361 gaagggagta tgtttgtggc cctgtcagcc tccgtgttca gtctcctcgc catcgccatt 421 gagcgctata tcacaatgct gaaaatgaaa ctccacaacg ggagcaataa cttccgcctc 481 ttcctgctaa tcagcgcctg ctgggtcatc tccctcatcc tgggtggcct gcctatcatg 541 ggctggaact gcatcagtgc gctgtccagc tgctccaccg tgctgccgct ctaccacaag 601 cactatatcc tcttctgcac cacggtcttc actctgcttc tgctctccat cgtcattctg 661 tactgcagaa tctactcctt ggtcaggact cggagccgcc gcctgacgtt ccgcaagaac 721 atttccaagg ccagccgcag ctctgagaag tcgctggcgc tgctcaagac cgtaattatc 781 gtcctgagcg tcttcatcgc ctgctgggca ccgctcttca tcctgctcct gctggatgtg 841 ggctgcaagg tgaagacctg tgacatcctc ttcagagcgg agtacttcct ggtgttagct 901 gtgctcaact ccggcaccaa ccccatcatt tacactctga ccaacaagga gatgcgtcgg 961 gccttcatcc ggatcatgtc ctgctgcaag tgcccgagcg gagactctgc tggcaaattc 1021 aagcgaccca tcatcgccgg catggaattc agccgcagca aatcggacaa ttcctcccac 1081 ccccagaaag acgaagggga caacccagag accattatgt cttctggaaa cgtcaactct 1141 tcttcctag //