LOCUS CR457136 1695 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens full open reading frame cDNA clone RZPDo834E1014D for
gene TRIM16, tripartite motif-containing 16; complete cds, incl.
stopcodon.
ACCESSION CR457136
VERSION CR457136.1
KEYWORDS Full ORF shuttle clone, Gateway(TM), complete cds.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1695)
AUTHORS Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.
TITLE Cloning of human full open reading frames in Gateway(TM) system
entry vector (pDONR201)
JOURNAL Unpublished.
REFERENCE 2 (bases 1 to 1695)
AUTHORS Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.
JOURNAL Submitted (03-JUN-2004) to the INSDC. RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH, Im Neuenheimer Feld
580, D-69120 Heidelberg, Germany
COMMENT RZPD; RZPDo834E1014D, ORFNo 1908
www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=RZPDo834E1014D
RZPDLIB; Human Full ORF Clones Gateway(TM) - RZPD (kan-resist.)
RZPD LIB No. 834
www.rzpd.de/cgi-bin/products/showLib.pl.cgi/response?libNo=834
www.rzpd.de/products/orfclones/
Contact: Inge Arlart
RZPD Deutsches Ressourcenzentrum fuer Genomforschung GmbH,
Heubnerweg 6, D-14059 Berlin, Germany
Tel: +49 30 32639 100
Fax: +49 30 32639 111
www.rzpd.de
This clone is available from RZPD;
contact RZPD (customer.service@rzpd.de) for further information.
This CDS clone is a part of a collection of human full length
expression clones generated by RZPD.
This CDS has been cloned incl. stopcodon.
The CDS has been inserted into pDONR201 via a BP Clonase(TM)
reaction.
Additional sequence has been added in front of the start codon:
att..AAAAAA GCA GGC (ATG).
The last base of the last coding triplett has been changed to T,
which might lead to an amino acid change at the C terminus of the
polypeptide.
The stop codon has been set to TAA followed by
TTAACCCAGCTTTCTT..att.
Compared to the reference sequence BC053514 we did not find any
amino acid exchanges.
Clone distribution: http://www.rzpd.de/products/orfclones/
FEATURES Location/Qualifiers
source 1..1695
/db_xref="H-InvDB:HIT000267986"
/organism="Homo sapiens"
/lab_host="DH10B"
/mol_type="mRNA"
/clone_lib="Human Full ORF Clones Gateway(TM) - RZPD"
/clone="RZPDo834E1014D"
/note="Vector: pDONR201, Site_1: attP1; Site_2: attP2"
/db_xref="taxon:9606"
CDS 1..1695
/codon_start=1
/gene="TRIM16"
/db_xref="GOA:O95361"
/db_xref="H-InvDB:HIT000267986.13"
/db_xref="HGNC:HGNC:17241"
/db_xref="InterPro:IPR000315"
/db_xref="InterPro:IPR001870"
/db_xref="InterPro:IPR003877"
/db_xref="InterPro:IPR003879"
/db_xref="InterPro:IPR006574"
/db_xref="InterPro:IPR013320"
/db_xref="UniProtKB/Swiss-Prot:O95361"
/protein_id="CAG33417.1"
/translation="MAELDLMAPGPLPRATAQPPAPLSPDSGSPSPDSGSASPVEEED
VGSSEKLGRETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTRRVKAVKSCLTCMVNYCE
EHLQPHQVNIKLQSHLLTEPVKDHNWRYCPAHHSPLSAFCCPDQQCICQDCCQEHSGH
TIVSLDAARRDKEAELQCTQLDLERKLKLNENAISRLQANQKSVLVSVSEVKAVAEMQ
FGELLAAVRKAQANVMLFLEEKEQAALSQANGIKAHLEYRSAEMEKSKQELERMAAIS
NTVQFLEEYCKFKNTEDITFPSVYVGLKDKLSGIRKVITESTVHLIQLLENYKKKLQE
FSKEEEYDIRTQVSAVVQRKYWTSKPEPSTREQFLQYAYDITFDPDTAHKYLRLQEEN
RKVTNTTPWEHPYPDLPSRFLHWRQVLSQQSLYLHRYYFEVEIFGAGTYVGLTCKGID
RKGEERNSCISGNNFSWSLQWNGKEFTAWYSDMETPLKAGPFRRLGVYIDFPGGILSF
YGVEYDTMTLVHKFACKFSEPVYAAFWLSKKENAIRIVDLGEEPEKPAPSLVVTAP"
BASE COUNT 425 a 455 c 480 g 335 t
ORIGIN
1 atggctgagt tggatctaat ggctccaggg ccactgccca gggccactgc tcagccccca
61 gcccctctca gcccagactc tgggtcaccc agcccagatt ctgggtcagc cagcccagtg
121 gaagaagagg acgtgggctc ctcggagaag cttggcaggg agacggagga acaggacagc
181 gactctgcag agcaggggga tcctgctggt gaggggaaag aggtcctgtg tgacttctgc
241 cttgatgaca ccagaagagt gaaggcagtg aagtcctgtc taacctgcat ggtgaattac
301 tgtgaagagc acttgcagcc gcatcaggtg aacatcaaac tgcaaagcca cctgctgacc
361 gagccagtga aggaccacaa ctggcgatac tgccctgccc accacagccc actgtctgcc
421 ttctgctgcc ctgatcagca gtgcatctgc caggactgtt gccaggagca cagtggccac
481 accatagtct ccctggatgc agcccgcagg gacaaggagg ctgaactcca gtgcacccag
541 ttagacttgg agcggaaact caagttgaat gaaaatgcca tctccaggct ccaggctaac
601 caaaagtctg ttctggtgtc ggtgtcagag gtcaaagcgg tggctgaaat gcagtttggg
661 gaactccttg ctgctgtgag gaaggcccag gccaatgtga tgctcttctt agaggagaag
721 gagcaagctg cgctgagcca ggccaacggt atcaaggccc acctggagta caggagtgcc
781 gagatggaga agagcaagca ggagctggag aggatggcgg ccatcagcaa cactgtccag
841 ttcttggagg agtactgcaa gtttaagaac actgaagaca tcaccttccc tagtgtttac
901 gtagggctga aggataaact ctcgggcatc cgcaaagtta tcacggaatc cactgtacac
961 ttaatccagt tgctggagaa ctataagaaa aagctccagg agttttccaa ggaagaggag
1021 tatgacatca gaactcaagt gtctgccgtt gttcagcgca aatattggac ttccaaacct
1081 gagcccagca ccagggaaca gttcctccaa tatgcgtatg acatcacgtt tgacccggac
1141 acagcacaca agtatctccg gctgcaggag gagaaccgca aggtcaccaa caccacgccc
1201 tgggagcatc cctacccgga cctccccagc aggttcctgc actggcggca ggtgctgtcc
1261 cagcagagtc tgtacctgca caggtactat tttgaggtgg agatcttcgg ggcaggcacc
1321 tatgttggcc tgacctgcaa aggcatcgac cggaaagggg aggagcgcaa cagttgcatt
1381 tccggaaaca acttctcctg gagcctccaa tggaacggga aggagttcac ggcctggtac
1441 agtgacatgg agaccccact caaagctggc cctttccgga ggctcggggt ctatatcgac
1501 ttcccgggag ggatcctttc cttctatggc gtagagtatg ataccatgac tctggttcac
1561 aagtttgcct gcaaattttc agaaccagtc tatgctgcct tctggctttc caagaaggaa
1621 aacgccatcc ggattgtaga tctgggagag gaacccgaga agccagcacc gtccttggtg
1681 gtgactgctc cttaa
//