LOCUS CR457081 1413 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens full open reading frame cDNA clone RZPDo834F0711D for
gene SNX17, sorting nexin 17; complete cds, incl. stopcodon.
ACCESSION CR457081
VERSION CR457081.1
KEYWORDS Full ORF shuttle clone, Gateway(TM), complete cds.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1413)
AUTHORS Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.
TITLE Cloning of human full open reading frames in Gateway(TM) system
entry vector (pDONR201)
JOURNAL Unpublished.
REFERENCE 2 (bases 1 to 1413)
AUTHORS Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.
JOURNAL Submitted (03-JUN-2004) to the INSDC. RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH, Im Neuenheimer Feld
580, D-69120 Heidelberg, Germany
COMMENT RZPD; RZPDo834F0711D, ORFNo 1767
www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=RZPDo834F0711D
RZPDLIB; Human Full ORF Clones Gateway(TM) - RZPD (kan-resist.)
RZPD LIB No. 834
www.rzpd.de/cgi-bin/products/showLib.pl.cgi/response?libNo=834
www.rzpd.de/products/orfclones/
Contact: Inge Arlart
RZPD Deutsches Ressourcenzentrum fuer Genomforschung GmbH,
Heubnerweg 6, D-14059 Berlin, Germany
Tel: +49 30 32639 100
Fax: +49 30 32639 111
www.rzpd.de
This clone is available from RZPD;
contact RZPD (customer.service@rzpd.de) for further information.
This CDS clone is a part of a collection of human full length
expression clones generated by RZPD.
This CDS has been cloned incl. stopcodon.
The CDS has been inserted into pDONR201 via a BP Clonase(TM)
reaction.
Additional sequence has been added in front of the start codon:
att..AAAAAA GCA GGC (ATG).
The last base of the last coding triplett has been changed to T,
which might lead to an amino acid change at the C terminus of the
polypeptide.
The stop codon has been set to TAA followed by
TTAACCCAGCTTTCTT..att.
Compared to the reference sequence BT007167 we did not find any
amino acid exchanges.
Clone distribution: http://www.rzpd.de/products/orfclones/
FEATURES Location/Qualifiers
source 1..1413
/db_xref="H-InvDB:HIT000267931"
/organism="Homo sapiens"
/lab_host="DH10B"
/mol_type="mRNA"
/clone_lib="Human Full ORF Clones Gateway(TM) - RZPD"
/clone="RZPDo834F0711D"
/note="Vector: pDONR201, Site_1: attP1; Site_2: attP2"
/db_xref="taxon:9606"
CDS 1..1413
/codon_start=1
/gene="SNX17"
/db_xref="GOA:Q15036"
/db_xref="H-InvDB:HIT000267931.13"
/db_xref="HGNC:HGNC:14979"
/db_xref="InterPro:IPR000159"
/db_xref="InterPro:IPR001683"
/db_xref="InterPro:IPR011993"
/db_xref="InterPro:IPR028666"
/db_xref="InterPro:IPR036871"
/db_xref="InterPro:IPR037831"
/db_xref="InterPro:IPR037836"
/db_xref="InterPro:IPR040842"
/db_xref="PDB:3FOG"
/db_xref="PDB:3LUI"
/db_xref="PDB:4GXB"
/db_xref="PDB:4TKN"
/db_xref="UniProtKB/Swiss-Prot:Q15036"
/protein_id="CAG33362.1"
/translation="MHFSIPETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLH
EQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFL
RRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYF
SLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAYDDDVMENR
VGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDA
CVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLPSGST
SSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGGSI
RKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKLSSKLSAVSLRGIGSPSTD
ASASDVHGNFAFEGIGDEDL"
BASE COUNT 323 a 358 c 419 g 313 t
ORIGIN
1 atgcactttt ccattcccga aaccgagtcc cgcagcgggg acagcggcgg ctccgcctac
61 gtggcctata acattcacgt gaatggagtc ctgcactgtc gggtgcgcta cagccagctc
121 ctggggctgc acgagcagct tcggaaggag tatggggcca atgtgcttcc tgcattcccc
181 ccaaagaagc ttttctctct gactcctgct gaggtagaac agaggagaga gcagttagag
241 aagtacatgc aagctgttcg gcaagaccca ttgcttggga gcagcgagac tttcaacagt
301 ttcctgcgtc gggcacaaca ggagacacag caggtcccca cagaggaagt gtccttggaa
361 gtgctgctca gcaacgggca gaaagttctg gtcaacgtgc taacttcaga tcagactgag
421 gatgtcctgg aggctgtagc tgcaaagctg gatcttccag atgacttgat tggatacttt
481 agtctattct tagttcgaga aaaagaggat ggagcctttt cttttgtacg gaagttgcaa
541 gagtttgagc tgccttatgt gtctgtcacc agccttcgga gtcaagagta taagattgtg
601 ctaaggaaga gttattggga ctctgcctat gatgacgatg tcatggagaa ccgggttggc
661 ctgaacctgc tttatgctca gacggtatca gatattgagc gtgggtggat cttggtcacc
721 aaggaacagc accggcaact caaatctctg caagagaaag tctccaagaa ggagttcctg
781 agactggccc agacgctgcg gcactatggc tacttgcgct ttgatgcctg tgtggctgac
841 ttcccagaaa aggactgtcc tgtggtggtg agcgcgggca acagtgagct cagcctgcag
901 ctccgcctgc ctggccagca actccgagaa ggctccttcc gggtcacccg catgcgatgc
961 tggcgggtca cctcctctgt accattgccc agtggaagca cgagcagccc aggccggggc
1021 cggggtgagg tgcgcctgga actggctttt gaatacctca tgagcaagga ccggctacag
1081 tgggtcacca tcactagccc ccaggctatc atgatgagca tctgcttgca gtccatggtt
1141 gatgaactga tggtgaagaa atctggcggc agtatcagga agatgctgcg ccggcgggtg
1201 gggggtactc tgagacgctc agacagccag caagcagtga agtccccacc actgcttgag
1261 tcacctgatg ccacccggga gtctatggtc aaactctcaa gtaagctgag tgccgtgagc
1321 ttgcggggaa ttggcagtcc cagcacagat gccagtgcca gtgatgtcca cggcaatttc
1381 gccttcgagg gcattggaga tgaggatctt taa
//