LOCUS CR456608 948 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens UPK3 full length open reading frame (ORF) cDNA clone
(cDNA clone C22ORF:pGEM.UPK3.V4).
ACCESSION CR456608
VERSION CR456608.1
KEYWORDS CDNA; chromosome 22; ORF.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 948)
AUTHORS Collins J.E., Wright C.L., Edwards C.A., Davis M.P., Grinham J.A.,
Cole C.G., Goward M.E., Aguado B., Mallya M., Mokrab Y.,
Huckle E.J., Beare D.M., Dunham I.
TITLE A genome annotation-driven approach to cloning the human ORFeome
JOURNAL Genome Biol. 5(10), R84-R84(2004).
PUBMED 15461802
REFERENCE 2 (bases 1 to 948)
AUTHORS Collins J.E., Wright C.L., Edwards C.A., Davis M.P., Grinham J.A.,
Cole C.G., Goward M.E., Aguado B., Mallya M., Mokrab Y.,
Huckle E.J., Beare D.M., Dunham I.
JOURNAL Submitted (23-MAR-2006) to the INSDC. Sanger Institute, Hinxton,
Cambridgeshire, CB10 1SA, UK. E-mail enquiries: c22g@sanger.ac.uk
COMMENT Sanger Institute name : pGEM.UPK3.V4
Homo sapiens cDNA sequence. This sequence was generated as part of
The Wellcome Trust Sanger Institute program to isolate cDNA clones
representing the full length open reading frame of well annotated
protein coding genes on human chromosome 22. For more information
see http://www.sanger.ac.uk/HGP/Chr22/ORFcloning
FEATURES Location/Qualifiers
source 1..948
/db_xref="H-InvDB:HIT000267542"
/organism="Homo sapiens"
/chromosome="22"
/lab_host="Mach1"
/mol_type="mRNA"
/clone="pGEM.UPK3.V4"
/db_xref="taxon:9606"
CDS 3..866
/gene="UPK3"
/db_xref="GOA:O75631"
/db_xref="H-InvDB:HIT000267542.12"
/db_xref="HGNC:HGNC:12580"
/db_xref="InterPro:IPR024825"
/db_xref="InterPro:IPR024831"
/db_xref="UniProtKB/Swiss-Prot:O75631"
/protein_id="CAG30494.1"
/translation="MPPLWALLALGCLRFGSAVNLQPQLASVTFATNNPTLTTVALEK
PLCMFDSKEALTGTHEVYLYVLVDSAISRNASVQDSTNTPLGSTFLQTEGGRTGPYKA
VAFDLIPCSDLPSLDAIGDVSKASQILNAYLVRVGANGTCLWDPNFQGLCNAPLSAAT
EYRFKYVLVNMSTGLVEDQTLWSDPIRTNQLTPYSTIDTWPGRRSGGMIVITSILGSL
PFFLLVGFAGAIALSLVDMGSSDGETTHDSQITQEAVPKSLGASESSYTSVNRGPPLD
RAEVYSSKLQD"
BASE COUNT 178 a 320 c 258 g 192 t
ORIGIN
1 cgatgcctcc gctctgggcc ctgctggccc tcggctgcct gcggttcggc tcggctgtga
61 acctgcagcc ccaactggcc agtgtgactt tcgccaccaa caaccccaca cttaccactg
121 tggccttgga aaagcctctc tgcatgtttg acagcaaaga ggccctcact ggcacccacg
181 aggtctacct gtatgtcctg gtcgactcag ccatttccag gaatgcctca gtgcaagaca
241 gcaccaacac cccactgggc tcaacgttcc tacaaacaga gggtgggagg acaggtccct
301 acaaagctgt ggcctttgac ctgatcccct gcagtgacct gcccagcctg gatgccattg
361 gggatgtgtc caaggcctca cagatcctga atgcctacct ggtcagggtg ggtgccaacg
421 ggacctgcct gtgggatccc aacttccagg gcctctgtaa cgcacccctg tcggcagcca
481 cggagtacag gttcaagtat gtcctggtca atatgtccac gggcttggta gaggaccaga
541 ccctgtggtc ggaccccatc cgcaccaacc agctcacccc atactcgacg atcgacacgt
601 ggccaggccg gcggagcgga ggcatgatcg tcatcacttc catcctgggc tccctgccct
661 tctttctact tgtgggtttt gctggcgcca ttgccctcag cctcgtggac atggggagtt
721 ctgatgggga aacgactcac gactcccaaa tcactcagga ggctgttccc aagtcgctgg
781 gggcctcgga gtcttcctac acgtccgtga accgggggcc gccactggac agggctgagg
841 tgtattccag caagctccag gactgagccc agcaccaccc ctgggcagca gcatcctcct
901 ctctggcctt gccccaggcc ctgcagcggt ggttgtcaca ccctgact
//