LOCUS CK335257 517 bp mRNA linear EST 12-MAY-2010 DEFINITION H3157D04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3157D04 5', mRNA sequence. ACCESSION CK335257 VERSION CK335257.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 517) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3157 row: D column: 04 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..517 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3157D04-5" /db_xref="taxon:10090" /clone="H3157D04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 128 a 120 c 121 g 148 t ORIGIN 1 cattgagtta ttgtaatcct atctcagtct gtggaggagg aggtacaaga acatgaaaag 61 ccttccttct atttcttccc tgctgcttcc tcctgtgctt tgcagtgctt tagcctgagg 121 accaaagccc cactgactgc aagtcatgta tctgttggcg tccagaggcc tggctggctg 181 aagaggtcca tttctagaag caggacatgc agctgcttgg agtcagtgca gttctaaaag 241 gatctccatt ttcagacata ttgatgaaat agttcatacc atgatccaca gtgctcattt 301 ggatcgtgtt ttccagaact tttaggttgt gggtggccaa gcaagaccag gtggtactga 361 tagatacaac agaacttaca gtggcatcag tggaggggtc caggatctta atttctcaga 421 ccttgcatct ctccttcagc atggaaatcc agtcagcttg aaaactggca tccaagagtc 481 cttcatttct caaaccctgc ctgacctatt gtgagga //