LOCUS CK335189 699 bp mRNA linear EST 12-MAY-2010 DEFINITION H3150G10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3150G10 5', mRNA sequence. ACCESSION CK335189 VERSION CK335189.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 699) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3150 row: G column: 10 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..699 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3150G10-5" /db_xref="taxon:10090" /clone="H3150G10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 221 a 146 c 134 g 198 t ORIGIN 1 ctcacattgt agtctcagca tttgggaggc tgaggcagaa agattaccag gagttggaga 61 caaatcctag gttacagtgt gagatactat cccccaaaac atccccacaa acaaaaacac 121 tagtgtattg ttttgccgta aagaatatct ctggggccta ggaaaacgtt cagtcagtaa 181 tggactcaca ccagccttag gacctgagtt taaacttgga gggagcagat ccctggattt 241 tacgaggtag ccaaactcag cctaactagt gagccccaga tccaaggggg aaatcctgta 301 ttccaaaaag caaggtggat gcctcctgag gaagggccgc ctagactgat ccctagcctc 361 cacatccaca cacacacatg cacacattca gaaatatgga tgtgtacaca caaaaaggat 421 atctcaggat gctgttactc tgccattaaa agtttataat catgaatttt taaaatactt 481 gattatgcac attatggaat acgtttctgt ttccagataa ctaacttgta accaatcatt 541 ttatttccta atatcctttt catattaaga gaattatatg tgactaaaaa tatacatgat 601 ttgtgtttgt taagcatttt aaatttgtct ttgcttttga caataagaac caaaatttct 661 tccgtgcgcc tttgtcagct aagaatgact agcagtggc //