LOCUS CK335176 486 bp mRNA linear EST 12-MAY-2010 DEFINITION H3150B09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3150B09 5', mRNA sequence. ACCESSION CK335176 VERSION CK335176.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 486) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3150 row: B column: 09 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..486 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3150B09-5" /db_xref="taxon:10090" /clone="H3150B09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 122 a 110 c 154 g 100 t ORIGIN 1 ggaagtaggt agggtttcgc cagagacccc ggaagcgacg gcttctcgtc tttgctaagg 61 cttctggttt ttgctacggt ttctgatttc ggctttggga tgggttgcga cggaggcacc 121 atccccaaga ggcacgagct ggtgaagggg ccgaagaagg tcgagaaggt tgacaaagac 181 gctgaactgg tagcccaatg gaactactgt accctaagtc aggaaatcct gaggcgccca 241 atagttgcct gtgagcttgg cagactgtat aacaaagacg cggtcatcga gtttctgttg 301 gacaaatctg ctgagaaggc cctggggaag gcggcatcgc acatcagaag catcaagaat 361 gtgacagagc tcaggctttc tgacaacccc gcctgggaag gagataaagg gaacaccaag 421 ggtgacaagc atgatgacct ccagagagcg cggttcatct gccctgtggt gggcctggag 481 atgaat //