LOCUS CK335127 607 bp mRNA linear EST 12-MAY-2010 DEFINITION H3144F03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3144F03 5', mRNA sequence. ACCESSION CK335127 VERSION CK335127.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 607) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3144 row: F column: 03 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..607 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3144F03-5" /db_xref="taxon:10090" /clone="H3144F03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 182 a 128 c 151 g 146 t ORIGIN 1 gggcgagcca ggccccgacc cctgcgaggt agacgggctc ctgcggcaag gggacatgct 61 tcgggcgttc catgcagctt tgcggaactc accaatcaac accaagaatc aagctgtgaa 121 ggaacgagcc cagtgtgtag tcctgaaagt actcacaaac tttaagagca gcgaaattga 181 gcaggctgtg cagtcactgg acagaaatgg cattgatttg ctaatgaagt acatttataa 241 agggtttgag aagcctacag aaaatagcag tgcagtgcta ctccagtggc atgaaaaggc 301 cttagctgta ggaggactag gctccattat aagagttctt acagcaagaa agactgttta 361 aaaaaaaatc ctgttacctt gagaagaatt ttggatgccc aggctggtga agaagggact 421 gacaatggac catcttccta gaactcccaa ctaaatactt caggacacat cttctggaat 481 gtattttact tttgaggtgg agggagaaat tgtcttattg attcctaaat tctttgcagg 541 atcagaatgt ctgcctttgt ctacagagtt aacacagaac caacacttga ctatcaggct 601 gactggc //