LOCUS CK335093 603 bp mRNA linear EST 12-MAY-2010 DEFINITION H3141A08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3141A08 5', mRNA sequence. ACCESSION CK335093 VERSION CK335093.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 603) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3141 row: A column: 08 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..603 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3141A08-5" /db_xref="taxon:10090" /clone="H3141A08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 173 a 124 c 186 g 120 t ORIGIN 1 gaggatcgaa gcggccttgg gatgtctctg gctgatgagc tcttggctga cctcgaggag 61 gcagcagaag aagaggaagg aggaagctat ggagaagagg aggaggagcc agcaattgag 121 gatgtacagg aggagaccca gctggatctt tctggagatt cagtcaggag cattgccaag 181 ctatgggaca gcaagatgtt tgctgagatc atgatgaaga ttgaggagta tatcagcaag 241 caagccaacg tgtcggaagt gatgggacca gtggaggcag ctcctgagta ccgagtcatt 301 gtggatgcca acaacctgac tgtggagata gaaaatgagc tgaacattat ccacaagttc 361 atccgggata aatactcaaa gagattccct gagctagaat ccttggtgcc caatgctctg 421 gattacatcc gcacagtcaa ggagctgggc aacagcctgg ataagtgcaa gaacaatgag 481 aacctccagc agatcctgac caatgctact atcatggttg ttagtgtcac tgcctctact 541 acccaggggc agcagctgtc ggatgaggag ctagagcggc tagaggaggc ctgtgacatg 601 gca //