LOCUS CK334986 438 bp mRNA linear EST 12-MAY-2010 DEFINITION H3129E05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3129E05 5', mRNA sequence. ACCESSION CK334986 VERSION CK334986.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 438) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3129 row: E column: 05 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..438 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3129E05-5" /db_xref="taxon:10090" /clone="H3129E05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 140 a 87 c 105 g 106 t ORIGIN 1 agctcgggtt gccggcgtga tgcctctgtt cactgccaac ccgttcgagc aagatgtgga 61 aaaagccaca aatgagtaca acaccacaga agactggagt ctgatcatgg acatctgtga 121 cagggttgga agcactccca gtggagcaaa agattgccta aaagccataa tgaaaagggt 181 aaaccataag gtccctcacg ttgctctgca ggcattgacc cttcttggag cttgtgtggc 241 aaactgtgga aagatatttc atttagaagt atgttcccgt gattttgcaa cggaagtacg 301 ttctgtgata aaaaataagg ctcatcctaa agtatgtgaa aaactaaaat ctctaatggt 361 ggaatggtca gaagaattcc agaaggaccc ccaatttagt ctgatatctg caactattaa 421 gtctatgaaa gaagaagg //